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The map label for this gene is rutD [H]

Identifier: 126453109

GI number: 126453109

Start: 3875859

End: 3876680

Strand: Direct

Name: rutD [H]

Synonym: BURPS1106A_3974

Alternate gene names: 126453109

Gene position: 3875859-3876680 (Clockwise)

Preceding gene: 126453614

Following gene: 126452430

Centisome position: 97.18

GC content: 68.61

Gene sequence:

>822_bases
ATGCCTTTCGTCACGATCGATGGCCAGCCCCTGCACTATCAGATCAGGGGCGCCGGCGCGCCCGTCCTGTTCGGACACAG
CTACCTGTGGGATTCGTCGATGTGGGAGCCGCAGCTCGACGCGCTCTCGAAGTCGTACCGCGTGATCGCGCCGGACCTGT
GGGGACACGGCCGGTCCGGCCCGCTGCCCGACGGCACGCGCAGCCTCGACGATCTCGCGAGACAGATGAGCGAGCTCCTC
GATCACCTCGACATCGACACCTGCTCGATCGTCGGGCTATCGGTGGGCGGCATGTGGGCGGTGCCGCTCGCGCATCGCGC
GCCGCAACGTATCGACCGTCTCGTGCTGATGGATACCTACGTCGGCGTCGAGCCCGACGCGACGCGCAACCAGTATTTCC
AGATGCTCGAGGCCATCGACGCGCAAGGCGCGATTCCGGCGCCGCTGCTCGACGCGATCGTGCCGATCTTCTTCCGCCCC
GGCATCGATCCGGCGAGCGAGCTGCCCACGGGCTTCCGGCGCGCGCTGCAGGCGTTCACGACCGAGCGGCTGCGCGACTC
GGTGATACCGCTCGGCAAGATCACGTTCGGCCGCGAAGACGCGCGCGCGCAACTGAGCGCGCTGCCGGCGGACCGCACGC
TCGTGATGTGCGGCGCGAACGACGTCGCGCGGCCGCCCGAGGAAGCCGACGAAATCGCGGCGCTCATCGGCTGCGAAAAG
GCGTTCGTGCCGAATGCCGGGCATATCTCGAATCTCGAGAATCCGGCATTCGTCACGCAGGCGCTGAGCGATTGGCTCGG
GCGCGGCGCGGCCCGTGCGTGA

Upstream 100 bases:

>100_bases
CAATCACGACGATTGCCGCCGATTGCTTCGGCATGCGCATCGATTCCGCGCGTTCGCCCGAACTCCCTTAACCGATTCAT
TGCCTAGCGACCTTATCGAC

Downstream 100 bases:

>100_bases
CCGATGCGCGATCGACGGTCGAGGCGTGACCGATATGTGATCGGCGCGCCGATCACGCGACCTTGAACTGCCCGACCGCG
TCGGCGAGCTCGACCGCCTG

Product: 3-oxoadipate enol-lactone hydrolase family protein

Products: NA

Alternate protein names: Aminohydrolase [H]

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MPFVTIDGQPLHYQIRGAGAPVLFGHSYLWDSSMWEPQLDALSKSYRVIAPDLWGHGRSGPLPDGTRSLDDLARQMSELL
DHLDIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTYVGVEPDATRNQYFQMLEAIDAQGAIPAPLLDAIVPIFFRP
GIDPASELPTGFRRALQAFTTERLRDSVIPLGKITFGREDARAQLSALPADRTLVMCGANDVARPPEEADEIAALIGCEK
AFVPNAGHISNLENPAFVTQALSDWLGRGAARA

Sequences:

>Translated_273_residues
MPFVTIDGQPLHYQIRGAGAPVLFGHSYLWDSSMWEPQLDALSKSYRVIAPDLWGHGRSGPLPDGTRSLDDLARQMSELL
DHLDIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTYVGVEPDATRNQYFQMLEAIDAQGAIPAPLLDAIVPIFFRP
GIDPASELPTGFRRALQAFTTERLRDSVIPLGKITFGREDARAQLSALPADRTLVMCGANDVARPPEEADEIAALIGCEK
AFVPNAGHISNLENPAFVTQALSDWLGRGAARA
>Mature_272_residues
PFVTIDGQPLHYQIRGAGAPVLFGHSYLWDSSMWEPQLDALSKSYRVIAPDLWGHGRSGPLPDGTRSLDDLARQMSELLD
HLDIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTYVGVEPDATRNQYFQMLEAIDAQGAIPAPLLDAIVPIFFRPG
IDPASELPTGFRRALQAFTTERLRDSVIPLGKITFGREDARAQLSALPADRTLVMCGANDVARPPEEADEIAALIGCEKA
FVPNAGHISNLENPAFVTQALSDWLGRGAARA

Specific function: May increase the rate of spontaneous hydrolysis of aminoacrylate to malonic semialdehyde. Required to remove a toxic intermediate produce in the pyrimidine nitrogen degradation [H]

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily. Hydrolase RutD family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000073
- InterPro:   IPR019913 [H]

Pfam domain/function: PF00561 Abhydrolase_1 [H]

EC number: NA

Molecular weight: Translated: 29705; Mature: 29574

Theoretical pI: Translated: 4.74; Mature: 4.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFVTIDGQPLHYQIRGAGAPVLFGHSYLWDSSMWEPQLDALSKSYRVIAPDLWGHGRSG
CCEEEECCCCEEEEEECCCCCEEECCHHHCCCCCCCHHHHHHCCCCEEEECHHCCCCCCC
PLPDGTRSLDDLARQMSELLDHLDIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTY
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCEEECHHHHCCHHHHHHHHHHHHH
VGVEPDATRNQYFQMLEAIDAQGAIPAPLLDAIVPIFFRPGIDPASELPTGFRRALQAFT
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
TERLRDSVIPLGKITFGREDARAQLSALPADRTLVMCGANDVARPPEEADEIAALIGCEK
HHHHHHHCCCCCCEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCH
AFVPNAGHISNLENPAFVTQALSDWLGRGAARA
HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PFVTIDGQPLHYQIRGAGAPVLFGHSYLWDSSMWEPQLDALSKSYRVIAPDLWGHGRSG
CEEEECCCCEEEEEECCCCCEEECCHHHCCCCCCCHHHHHHCCCCEEEECHHCCCCCCC
PLPDGTRSLDDLARQMSELLDHLDIDTCSIVGLSVGGMWAVPLAHRAPQRIDRLVLMDTY
CCCCCCHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCEEECHHHHCCHHHHHHHHHHHHH
VGVEPDATRNQYFQMLEAIDAQGAIPAPLLDAIVPIFFRPGIDPASELPTGFRRALQAFT
CCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHH
TERLRDSVIPLGKITFGREDARAQLSALPADRTLVMCGANDVARPPEEADEIAALIGCEK
HHHHHHHCCCCCCEECCCHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCH
AFVPNAGHISNLENPAFVTQALSDWLGRGAARA
HCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA