| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453107
Identifier: 126453107
GI number: 126453107
Start: 1493071
End: 1493388
Strand: Reverse
Name: 126453107
Synonym: BURPS1106A_1537
Alternate gene names: NA
Gene position: 1493388-1493071 (Counterclockwise)
Preceding gene: 126454215
Following gene: 126451490
Centisome position: 37.44
GC content: 63.52
Gene sequence:
>318_bases ATGCCTTCGAACACCCCGCCCTCCGCATCGCACAGCCCGCTCTATCTGAATCTGCTCGGCGAAACCGCGAAGATCGACTG GTGCGATCTCGAGCGCTTTTTCGCGCAAGGCAAACTGTTGTCGGTCGCGCGCGATCTCGATCTCGTGAGCGTCGCCGAAG CGATCGCAAGTGACGACAAGGAACAGGTCACACGCTGGCTGTCCGCGGGGCACGTCGAACGAATGCAGGCCGGCACCGCG CAGGATTACGCGACGCGCAATCCCGAGCTGTGGGCGGTCGTCGTATCGCCGTGGGTGTGCGTGCAGGCACGCTCGTAA
Upstream 100 bases:
>100_bases CACGCCGCCGCCCGCCGCGAAACCCGTCCGAACGGCCGAGTCTCGCCGCCCGGGCGAATGGTTTATAGTGGCGCTCACTG TCGTTCCGTCTCCTCATGCC
Downstream 100 bases:
>100_bases CACCGCGATGTCCGCCTCCTCCCCTCCGACGCACGCAGACGAAGACCCCGAGCCGCGCGCTGCCGCGAACGGGCATCGGC GCGTGCTCGGCCTCGCGTTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MPSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDKEQVTRWLSAGHVERMQAGTA QDYATRNPELWAVVVSPWVCVQARS
Sequences:
>Translated_105_residues MPSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDKEQVTRWLSAGHVERMQAGTA QDYATRNPELWAVVVSPWVCVQARS >Mature_104_residues PSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDKEQVTRWLSAGHVERMQAGTAQ DYATRNPELWAVVVSPWVCVQARS
Specific function: Unknown
COG id: COG5626
COG function: function code S; Uncharacterized conserved small protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11585; Mature: 11454
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDK CCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCH EQVTRWLSAGHVERMQAGTAQDYATRNPELWAVVVSPWVCVQARS HHHHHHHHCCCHHHHHCCCCCHHCCCCCCEEEEEECCEEEEEECC >Mature Secondary Structure PSNTPPSASHSPLYLNLLGETAKIDWCDLERFFAQGKLLSVARDLDLVSVAEAIASDDK CCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCH EQVTRWLSAGHVERMQAGTAQDYATRNPELWAVVVSPWVCVQARS HHHHHHHHCCCHHHHHCCCCCHHCCCCCCEEEEEECCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA