| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453079
Identifier: 126453079
GI number: 126453079
Start: 2397950
End: 2398456
Strand: Reverse
Name: 126453079
Synonym: BURPS1106A_2441
Alternate gene names: NA
Gene position: 2398456-2397950 (Counterclockwise)
Preceding gene: 126451480
Following gene: 126451968
Centisome position: 60.13
GC content: 66.07
Gene sequence:
>507_bases ATGGCACTTTCGATGTACGACGTCTCGATTCCCGCGCTGATTCGCGGGCTGAACAACCTGTCGGCCGTGCTCGACAAGGG CGACGCGCATGCGCGCGCGCAGGGCATCGATCCGGCCGAGCTCGTTCGTGCGCGGCTTCGCGACGACATGTACGCACTCG ACGCGCAGGTCCAGCGGGCGAGCGATACCGCGAAGGGATGCGGCGCGCGGCTCGCGGGCATCGAGGTGCCGTCGTTCGCC GATACGGAGACGACGTTCGCCGAGTTGCGCGCGCGCATCGGCAAGACGATCGATTTCCTGAAGACGATCCAGCCCGCGCA GCTCGACGGCAGCGAGTCGCGCACGATCGAGCTGCCGTTGCGCGACGGCGTGATGACGTTCGACGGCAAGTCGTACCTGG TCGGCTTTGCGCTGCCGAACTTCTATTTCCATACGACGACCGCGTACGACATCCTGCGGCACAAGGGCGTGCCGCTCGGC AAGATGGACTATCTCGGCGGGCGCTGA
Upstream 100 bases:
>100_bases GCGCCATCGAGCGTGGCTATCCGATCCGGTCTATGCTACGGAGCCGGCGCCACACTGAGTCGGCCGTCTCGCGGACCCCG CAACCCGTCAAGGAGAACCC
Downstream 100 bases:
>100_bases CGCGCATCCGCTCGTGGCCGCCGCGGCCGGCGTCCACGGGCCGAGGCCGGGCGACGACCGAATGCTACTGCATGGCCGGC GCTCCGCGGCGCGCGCGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MALSMYDVSIPALIRGLNNLSAVLDKGDAHARAQGIDPAELVRARLRDDMYALDAQVQRASDTAKGCGARLAGIEVPSFA DTETTFAELRARIGKTIDFLKTIQPAQLDGSESRTIELPLRDGVMTFDGKSYLVGFALPNFYFHTTTAYDILRHKGVPLG KMDYLGGR
Sequences:
>Translated_168_residues MALSMYDVSIPALIRGLNNLSAVLDKGDAHARAQGIDPAELVRARLRDDMYALDAQVQRASDTAKGCGARLAGIEVPSFA DTETTFAELRARIGKTIDFLKTIQPAQLDGSESRTIELPLRDGVMTFDGKSYLVGFALPNFYFHTTTAYDILRHKGVPLG KMDYLGGR >Mature_167_residues ALSMYDVSIPALIRGLNNLSAVLDKGDAHARAQGIDPAELVRARLRDDMYALDAQVQRASDTAKGCGARLAGIEVPSFAD TETTFAELRARIGKTIDFLKTIQPAQLDGSESRTIELPLRDGVMTFDGKSYLVGFALPNFYFHTTTAYDILRHKGVPLGK MDYLGGR
Specific function: Unknown
COG id: COG3812
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18337; Mature: 18206
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALSMYDVSIPALIRGLNNLSAVLDKGDAHARAQGIDPAELVRARLRDDMYALDAQVQRA CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SDTAKGCGARLAGIEVPSFADTETTFAELRARIGKTIDFLKTIQPAQLDGSESRTIELPL HCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC RDGVMTFDGKSYLVGFALPNFYFHTTTAYDILRHKGVPLGKMDYLGGR CCCEEEECCCEEEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ALSMYDVSIPALIRGLNNLSAVLDKGDAHARAQGIDPAELVRARLRDDMYALDAQVQRA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH SDTAKGCGARLAGIEVPSFADTETTFAELRARIGKTIDFLKTIQPAQLDGSESRTIELPL HCHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEC RDGVMTFDGKSYLVGFALPNFYFHTTTAYDILRHKGVPLGKMDYLGGR CCCEEEECCCEEEEEEECCCEEEEHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA