| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is maeB [H]
Identifier: 126453060
GI number: 126453060
Start: 3380978
End: 3383287
Strand: Reverse
Name: maeB [H]
Synonym: BURPS1106A_3476
Alternate gene names: 126453060
Gene position: 3383287-3380978 (Counterclockwise)
Preceding gene: 126452534
Following gene: 126452142
Centisome position: 84.83
GC content: 65.37
Gene sequence:
>2310_bases ATGTCGACCTCGTCCTCCTCCTCTTCCTCGAAAGAAAAACTCCGCGAAGCCGCTCTCGATTACCACGAATTCCCGACACC GGGCAAAGTCGCGATCGCGCCGACCAAACAGATGATCAATCAGCGCGATCTCGCGCTCGCCTATTCGCCGGGCGTCGCGT TCGCGTGCGAGGAGATCGTCGAGAACCCGTTGAACGCCGCGCGCTTCACCGCGCGCAGCAACCTCGTCGGCGTCGTCACG AACGGCACCGCGGTGCTCGGCCTCGGCAACATCGGCCCGCTCGCGTCGAAGCCGGTGATGGAAGGCAAGGCGGTCCTCTT CAAGAAGTTCGCCGGGATCGACGTGTTCGACATCGAGCTCAACGAATCCGATCCGCACAAGCTCGTCGACGTGATCGCCG CGCTCGAACCGACGTTCGGCGGGATCAACCTCGAGGACATCAAGGCGCCGGACTGCTTCATCGTCGAGCGCGAATGCCGC AAGCGAATGAAGATTCCGGTGTTCCACGACGACCAGCACGGCACCGCGATCGTCGTCGCGGCCGCGGTCACCAACGGGCT GAAGGTGGTCGGCAAGAGCATCAAGGAAGTGAAGCTCGTTGCGTCGGGCGCGGGCGCGGCCGCGCTCGCGTGCCTCGATT TGCTCGTCGATCTCGGCTTGCCGCTCGAGCACATCACGGTGACCGATCTGGCGGGCGTCGTCTACAAGGGCCGCGCGGAG CTGATGGACCCGGACAAGGAGCGTTTCGCGCGAGAAACCGATGCGCGCACGCTGTCGGAGGTGATCGACGGCGCGGACAT CTTCCTCGGCCTGTCGGCGGCCGGCGTGCTGAAGGCCGACATGGTGAAGAAGATGGCCGAGCGCCCGCTGATTCTCGCGC TCGCGAATCCGACTCCGGAAATCCTGCCGGAAGTGGCGCTGGAGGCGCGGCCGGACGCCGTGCTCGCGACGGGCCGCACC GATTATCCGAACCAGGTCAACAACGTCCTGTGCTTCCCGTTCATCTTCCGTGGCGCGCTCGATGTCGGCGCGACGACGAT CACCCGCGAGATGGAGATCGCCGCCGTCAACGCGATCGCCGAGCTCGCGCAGCAGGAGCAAAGCGACATCGTCGCGACCG CGTATGGTATTCAGGATCTCTCGTTCGGGCCCGAATATCTGATTCCGAAGCCGTTCGACCCGCGCCTCATCGTGAAGATC GCGCCCGCGGTCGCGCAGGCGGCGATGGACGGCGGTGTGGCGACCCGTCCGATCGAGGACATGGAAGCGTACAAGGTTCA CCTGCAGCAGTTCGTCTACCACAGCGGCACGACGATGAAGCCGGTGTTCCAGATCGCGCGCGGCGCGCCCGCCGAGAAGA AGCGGGTGGTGTTCGCGGAGGGCGAGGAAGAGCGCGTGCTGCGCGCGGTGCAGATCGTCGTCGACGAGAAGCTCGCGAAG CCGATCCTGATCGGGCGGCCCGCCGTGATCGAGCACCGGATCCAGCGCTACGGCCTGCGGCTCACGCCGGGTGTCGATTT CACGATCGTCAACACCGAGCACGACGAGCGTTACCGCGATTTCTGGCAAACCTACTTCAAGATGATGGCCCGCAAGGGGA TCAGCGAGCAGCTCGCGCGCGTCGAAATGCGCCGCCGCACGACGCTGATCGGCTCGATGCTCGTCAAGAAGGGCGAGGCG GACGGGATGATTTGCGGCACGATCAGCACGACGCACCGCCACCTGCACTTCATCGATCAGGTGATCGGCAAGCGCGCCGG CTGCAGCGTATACGGCGCGATGAACGCGCTGGTGCTGCCCGGCCGCCAGATTTTCCTGGTCGACACGCACGTGAACGTCG ATCCGACCCCGGCGCAGCTCGCCGAGATCACGATCATGGCGGCGGAAGAGGTGCGCCGCTTCGGCATCGAGCCGAAGGTC GCGCTGCTGTCGCATTCGAACTTCGGCACGAGCAACGCGCCTTCCGCGCAGAAGATGCGCGATACGCTCGCGATCCTGCA AGAACGCGCGCCCGATCTGCATGTCGACGGCGAGATGCACGGCGACGTCGCGCTCGACGCGGCGTTGCGCAAGGAGATCC TGCCCGAATCGACGCTCGAGGGCGAAGCGAACCTGCTCGTGCTGCCGAACATCGATGCCGCGAACATCGCCTACAACCTG CTCAAAACGGCTGCCGGCAACAACATCGCGATCGGGCCGATTCTGCTCGGCGCCGCGCAGCCCGTGCACGTGCTGACCGA ATCGGCGACCGTGCGCCGGATCGTCAACATGACGGCGCTGCTGGTTGCCGACGTGAACGCGGTACGTTGA
Upstream 100 bases:
>100_bases GGTCGCGGCTGTCAAACCCTAATCGGCGATTTTGCGTGTGGGATTGGCGCTACAATGCGTCGAACAGGTATTCTAATCCG CAGACCCCCCGTAGAGACAC
Downstream 100 bases:
>100_bases GCGAAGTTATCGGGCGATAAAAAAACGGCGCGCCCGTTGCGGGCGCGCCGTCGGGCATGGCGGAGAAAAGCGCCTTCCCG AAGCCGACGACGCCACCCTT
Product: malic enzyme
Products: NA
Alternate protein names: NADP-ME [H]
Number of amino acids: Translated: 769; Mature: 768
Protein sequence:
>769_residues MSTSSSSSSSKEKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFTARSNLVGVVT NGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAPDCFIVERECR KRMKIPVFHDDQHGTAIVVAAAVTNGLKVVGKSIKEVKLVASGAGAAALACLDLLVDLGLPLEHITVTDLAGVVYKGRAE LMDPDKERFARETDARTLSEVIDGADIFLGLSAAGVLKADMVKKMAERPLILALANPTPEILPEVALEARPDAVLATGRT DYPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELAQQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVKI APAVAQAAMDGGVATRPIEDMEAYKVHLQQFVYHSGTTMKPVFQIARGAPAEKKRVVFAEGEEERVLRAVQIVVDEKLAK PILIGRPAVIEHRIQRYGLRLTPGVDFTIVNTEHDERYRDFWQTYFKMMARKGISEQLARVEMRRRTTLIGSMLVKKGEA DGMICGTISTTHRHLHFIDQVIGKRAGCSVYGAMNALVLPGRQIFLVDTHVNVDPTPAQLAEITIMAAEEVRRFGIEPKV ALLSHSNFGTSNAPSAQKMRDTLAILQERAPDLHVDGEMHGDVALDAALRKEILPESTLEGEANLLVLPNIDAANIAYNL LKTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMTALLVADVNAVR
Sequences:
>Translated_769_residues MSTSSSSSSSKEKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFTARSNLVGVVT NGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAPDCFIVERECR KRMKIPVFHDDQHGTAIVVAAAVTNGLKVVGKSIKEVKLVASGAGAAALACLDLLVDLGLPLEHITVTDLAGVVYKGRAE LMDPDKERFARETDARTLSEVIDGADIFLGLSAAGVLKADMVKKMAERPLILALANPTPEILPEVALEARPDAVLATGRT DYPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELAQQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVKI APAVAQAAMDGGVATRPIEDMEAYKVHLQQFVYHSGTTMKPVFQIARGAPAEKKRVVFAEGEEERVLRAVQIVVDEKLAK PILIGRPAVIEHRIQRYGLRLTPGVDFTIVNTEHDERYRDFWQTYFKMMARKGISEQLARVEMRRRTTLIGSMLVKKGEA DGMICGTISTTHRHLHFIDQVIGKRAGCSVYGAMNALVLPGRQIFLVDTHVNVDPTPAQLAEITIMAAEEVRRFGIEPKV ALLSHSNFGTSNAPSAQKMRDTLAILQERAPDLHVDGEMHGDVALDAALRKEILPESTLEGEANLLVLPNIDAANIAYNL LKTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMTALLVADVNAVR >Mature_768_residues STSSSSSSSKEKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYSPGVAFACEEIVENPLNAARFTARSNLVGVVTN GTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIELNESDPHKLVDVIAALEPTFGGINLEDIKAPDCFIVERECRK RMKIPVFHDDQHGTAIVVAAAVTNGLKVVGKSIKEVKLVASGAGAAALACLDLLVDLGLPLEHITVTDLAGVVYKGRAEL MDPDKERFARETDARTLSEVIDGADIFLGLSAAGVLKADMVKKMAERPLILALANPTPEILPEVALEARPDAVLATGRTD YPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIAELAQQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVKIA PAVAQAAMDGGVATRPIEDMEAYKVHLQQFVYHSGTTMKPVFQIARGAPAEKKRVVFAEGEEERVLRAVQIVVDEKLAKP ILIGRPAVIEHRIQRYGLRLTPGVDFTIVNTEHDERYRDFWQTYFKMMARKGISEQLARVEMRRRTTLIGSMLVKKGEAD GMICGTISTTHRHLHFIDQVIGKRAGCSVYGAMNALVLPGRQIFLVDTHVNVDPTPAQLAEITIMAAEEVRRFGIEPKVA LLSHSNFGTSNAPSAQKMRDTLAILQERAPDLHVDGEMHGDVALDAALRKEILPESTLEGEANLLVLPNIDAANIAYNLL KTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMTALLVADVNAVR
Specific function: Unknown
COG id: COG0281
COG function: function code C; Malic enzyme
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the phosphate acetyltransferase and butyryltransferase family [H]
Homologues:
Organism=Homo sapiens, GI4505143, Length=345, Percent_Identity=26.6666666666667, Blast_Score=82, Evalue=2e-15, Organism=Homo sapiens, GI62420882, Length=352, Percent_Identity=28.6931818181818, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI62420880, Length=352, Percent_Identity=28.6931818181818, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI239049447, Length=352, Percent_Identity=28.6931818181818, Blast_Score=80, Evalue=5e-15, Organism=Homo sapiens, GI4505145, Length=419, Percent_Identity=27.4463007159904, Blast_Score=73, Evalue=9e-13, Organism=Homo sapiens, GI270265879, Length=368, Percent_Identity=28.804347826087, Blast_Score=72, Evalue=2e-12, Organism=Escherichia coli, GI1788806, Length=754, Percent_Identity=61.8037135278515, Blast_Score=968, Evalue=0.0, Organism=Escherichia coli, GI1788635, Length=319, Percent_Identity=32.9153605015674, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1788800, Length=326, Percent_Identity=31.5950920245399, Blast_Score=144, Evalue=2e-35, Organism=Caenorhabditis elegans, GI17537199, Length=464, Percent_Identity=25.6465517241379, Blast_Score=77, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6322823, Length=239, Percent_Identity=29.7071129707113, Blast_Score=80, Evalue=1e-15, Organism=Drosophila melanogaster, GI21356279, Length=484, Percent_Identity=25.4132231404959, Blast_Score=90, Evalue=7e-18, Organism=Drosophila melanogaster, GI281362674, Length=484, Percent_Identity=25.4132231404959, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI281362672, Length=484, Percent_Identity=25.4132231404959, Blast_Score=89, Evalue=8e-18, Organism=Drosophila melanogaster, GI78707242, Length=408, Percent_Identity=25.9803921568627, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707238, Length=408, Percent_Identity=25.9803921568627, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI78707240, Length=349, Percent_Identity=26.3610315186246, Blast_Score=72, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015884 - InterPro: IPR012301 - InterPro: IPR012302 - InterPro: IPR012188 - InterPro: IPR016040 - InterPro: IPR002505 [H]
Pfam domain/function: PF00390 malic; PF03949 Malic_M; PF01515 PTA_PTB [H]
EC number: =1.1.1.40 [H]
Molecular weight: Translated: 83206; Mature: 83075
Theoretical pI: Translated: 6.09; Mature: 6.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTSSSSSSSKEKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYSPGVAFACEEIV CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCEEEEECCCHHHHHHHHH ENPLNAARFTARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIEL HCCCHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE NESDPHKLVDVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKIPVFHDDQHGTAIVVA CCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHCCCCCEEECCCCCCEEEEE AAVTNGLKVVGKSIKEVKLVASGAGAAALACLDLLVDLGLPLEHITVTDLAGVVYKGRAE EHHHCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCHHHEEHHHHHHHHCCCCHH LMDPDKERFARETDARTLSEVIDGADIFLGLSAAGVLKADMVKKMAERPLILALANPTPE CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHH ILPEVALEARPDAVLATGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIA HHHHHHHCCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ELAQQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVKIAPAVAQAAMDGGVATRPIED HHHHHHHCCEEEEEECCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCHHH MEAYKVHLQQFVYHSGTTMKPVFQIARGAPAEKKRVVFAEGEEERVLRAVQIVVDEKLAK HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC PILIGRPAVIEHRIQRYGLRLTPGVDFTIVNTEHDERYRDFWQTYFKMMARKGISEQLAR CEEECCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHH VEMRRRTTLIGSMLVKKGEADGMICGTISTTHRHLHFIDQVIGKRAGCSVYGAMNALVLP HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEC GRQIFLVDTHVNVDPTPAQLAEITIMAAEEVRRFGIEPKVALLSHSNFGTSNAPSAQKMR CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHH DTLAILQERAPDLHVDGEMHGDVALDAALRKEILPESTLEGEANLLVLPNIDAANIAYNL HHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHH LKTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMTALLVADVNAVR HHHCCCCCEEECCEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure STSSSSSSSKEKLREAALDYHEFPTPGKVAIAPTKQMINQRDLALAYSPGVAFACEEIV CCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCHHHHCCCCCEEEEECCCHHHHHHHHH ENPLNAARFTARSNLVGVVTNGTAVLGLGNIGPLASKPVMEGKAVLFKKFAGIDVFDIEL HCCCHHHHHHHCCCEEEEEECCEEEEEECCCCCCCCCCCCCCHHHHHHHHCCCEEEEEEE NESDPHKLVDVIAALEPTFGGINLEDIKAPDCFIVERECRKRMKIPVFHDDQHGTAIVVA CCCCHHHHHHHHHHHCCCCCCCCHHHCCCCCEEEEEHHHHHCCCCCEEECCCCCCEEEEE AAVTNGLKVVGKSIKEVKLVASGAGAAALACLDLLVDLGLPLEHITVTDLAGVVYKGRAE EHHHCCHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHCCCCHHHEEHHHHHHHHCCCCHH LMDPDKERFARETDARTLSEVIDGADIFLGLSAAGVLKADMVKKMAERPLILALANPTPE CCCCCHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHCCCEEEEECCCCHH ILPEVALEARPDAVLATGRTDYPNQVNNVLCFPFIFRGALDVGATTITREMEIAAVNAIA HHHHHHHCCCCCEEEECCCCCCCHHHCCEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHH ELAQQEQSDIVATAYGIQDLSFGPEYLIPKPFDPRLIVKIAPAVAQAAMDGGVATRPIED HHHHHHHCCEEEEEECCEECCCCCCCCCCCCCCCEEEEEECHHHHHHHHCCCCCCCCHHH MEAYKVHLQQFVYHSGTTMKPVFQIARGAPAEKKRVVFAEGEEERVLRAVQIVVDEKLAK HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCC PILIGRPAVIEHRIQRYGLRLTPGVDFTIVNTEHDERYRDFWQTYFKMMARKGISEQLAR CEEECCCHHHHHHHHHCCCEECCCCCEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHH VEMRRRTTLIGSMLVKKGEADGMICGTISTTHRHLHFIDQVIGKRAGCSVYGAMNALVLP HHHHHHHHHHHHHHHHCCCCCCEEEEECHHHHHHHHHHHHHHCCCCCCCHHHCCCEEEEC GRQIFLVDTHVNVDPTPAQLAEITIMAAEEVRRFGIEPKVALLSHSNFGTSNAPSAQKMR CCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHHH DTLAILQERAPDLHVDGEMHGDVALDAALRKEILPESTLEGEANLLVLPNIDAANIAYNL HHHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCCEEEECCCCHHHHHHHH LKTAAGNNIAIGPILLGAAQPVHVLTESATVRRIVNMTALLVADVNAVR HHHCCCCCEEECCEEECCCCCHHHHHCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9205837; 9278503; 36376 [H]