| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453052
Identifier: 126453052
GI number: 126453052
Start: 3533245
End: 3534363
Strand: Reverse
Name: 126453052
Synonym: BURPS1106A_3633
Alternate gene names: NA
Gene position: 3534363-3533245 (Counterclockwise)
Preceding gene: 126453495
Following gene: 126455020
Centisome position: 88.61
GC content: 65.24
Gene sequence:
>1119_bases ATGTCCGATTCCACCCGCCCGAGCCGTTTCGCGCACGTCGATGCGATGCGCGCCGTCGCCGTGCTGTTCGTCATGTGGAC GCATTACGCCGAGCTGTTCGACAAGCTCGCCGGCTCGCAGCACGGGCTCGATGCGCTGCAGCGCTCGGTGAACTTCGGGC GCATCGGCGTCGTCATCTTCTTTTGCATCAGCGGGATGCTGATTCCGTCCAGCCTGCGCGGCGCGCCCGCGGAAGGCACG CGCCGCTTCGTCGTGCGCCGCTTCTTTCGGCTCTATCCGGCATTCTGGCTGTCACTGCCGCTCGGCTATCTCGTGTACTG GCTGCTGTTCGGACAGCGCATGGATGCATCCGGCCTGCTCGCGAACGTGACGATGATCCCCACCGCGTTCGGCCGCGATC CGGTGATGGGGCACTACTGGACGCTCGAAACCGAGCTGTACTTCTACGTGCTGTGCGTGCTGCTGTTCCGCATCGGCGCA CTGCATCGCATGCGCGACCTGTGCGCCGTCTGCGCGGGGCTCTGCGTGCTCTTCGTCGTCACGTCGGCGCTGAAGATCGT TCCGGCGAGCGCGCTCGGCCAGTACAAGGGGATGCTCTATCACCTCGCAATCATGTTCTGGGGCGCCTGCTTCAGGCAGG CATACGAGGCGCCGTCGAAGACGTTCGAATGGATGCGCGGCCGGCGGCCGATCACGTATCGCGCGGCGACGATCGCGCTC GCGCTCCTCATCGTGTCGATCTCGCTGCTGATGGCGGCGGCGAACTGGCGGCACGGCGATTTCGTGCACCTGTCGGCGTC GTTCGGCTACGTGCTCGGCATGGCGATTTTCGTTGTGCTCGCAACTGTATTGAAGATTCGCCTGCGGCTCTTCGCGTGGC TCGGCGAGATCAGCTACTCGATCTACCTGCTGCACGGCATTCCGCTATACCTGTTGCTGTGGGCGTGCGAACGATACGGA ATCACGGATTTGCCGCTCGGCTTCTACATGGCGTTGCCGGTGCTGCCGGCGATCGCGCTGTCGTGGGCGAGCCATCGGCT CTGCGAAGCGCCGTTCGTGCGCTTCGCGCATGCGCTGACGCCGAAGCGTCGCGCCGCGGCCGCGGCGGCGAAGGTCTGA
Upstream 100 bases:
>100_bases TGGTGACGAGGCGGCGATGCCGCTCGGCGCGTCCGTATGCGCCGAGGTCTGCGCGTGTCGCCGTTTCGCGCGCAGCGCCC GCCGTACGATCGATCCAGCC
Downstream 100 bases:
>100_bases CGAAAGCGGGCAGGGCGCACGGCGTCGGGGCTTGCCGATCGTCGGCCGCCTATCGTCGAGCCGCCGCTATCGCATTACGC GCCGTTCCGCGCTCGCGCAT
Product: putative acyltransferase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 372; Mature: 371
Protein sequence:
>372_residues MSDSTRPSRFAHVDAMRAVAVLFVMWTHYAELFDKLAGSQHGLDALQRSVNFGRIGVVIFFCISGMLIPSSLRGAPAEGT RRFVVRRFFRLYPAFWLSLPLGYLVYWLLFGQRMDASGLLANVTMIPTAFGRDPVMGHYWTLETELYFYVLCVLLFRIGA LHRMRDLCAVCAGLCVLFVVTSALKIVPASALGQYKGMLYHLAIMFWGACFRQAYEAPSKTFEWMRGRRPITYRAATIAL ALLIVSISLLMAAANWRHGDFVHLSASFGYVLGMAIFVVLATVLKIRLRLFAWLGEISYSIYLLHGIPLYLLLWACERYG ITDLPLGFYMALPVLPAIALSWASHRLCEAPFVRFAHALTPKRRAAAAAAKV
Sequences:
>Translated_372_residues MSDSTRPSRFAHVDAMRAVAVLFVMWTHYAELFDKLAGSQHGLDALQRSVNFGRIGVVIFFCISGMLIPSSLRGAPAEGT RRFVVRRFFRLYPAFWLSLPLGYLVYWLLFGQRMDASGLLANVTMIPTAFGRDPVMGHYWTLETELYFYVLCVLLFRIGA LHRMRDLCAVCAGLCVLFVVTSALKIVPASALGQYKGMLYHLAIMFWGACFRQAYEAPSKTFEWMRGRRPITYRAATIAL ALLIVSISLLMAAANWRHGDFVHLSASFGYVLGMAIFVVLATVLKIRLRLFAWLGEISYSIYLLHGIPLYLLLWACERYG ITDLPLGFYMALPVLPAIALSWASHRLCEAPFVRFAHALTPKRRAAAAAAKV >Mature_371_residues SDSTRPSRFAHVDAMRAVAVLFVMWTHYAELFDKLAGSQHGLDALQRSVNFGRIGVVIFFCISGMLIPSSLRGAPAEGTR RFVVRRFFRLYPAFWLSLPLGYLVYWLLFGQRMDASGLLANVTMIPTAFGRDPVMGHYWTLETELYFYVLCVLLFRIGAL HRMRDLCAVCAGLCVLFVVTSALKIVPASALGQYKGMLYHLAIMFWGACFRQAYEAPSKTFEWMRGRRPITYRAATIALA LLIVSISLLMAAANWRHGDFVHLSASFGYVLGMAIFVVLATVLKIRLRLFAWLGEISYSIYLLHGIPLYLLLWACERYGI TDLPLGFYMALPVLPAIALSWASHRLCEAPFVRFAHALTPKRRAAAAAAKV
Specific function: Unknown
COG id: COG1835
COG function: function code I; Predicted acyltransferases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41784; Mature: 41653
Theoretical pI: Translated: 10.06; Mature: 10.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDSTRPSRFAHVDAMRAVAVLFVMWTHYAELFDKLAGSQHGLDALQRSVNFGRIGVVIF CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHH FCISGMLIPSSLRGAPAEGTRRFVVRRFFRLYPAFWLSLPLGYLVYWLLFGQRMDASGLL HHHCCHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ANVTMIPTAFGRDPVMGHYWTLETELYFYVLCVLLFRIGALHRMRDLCAVCAGLCVLFVV HHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSALKIVPASALGQYKGMLYHLAIMFWGACFRQAYEAPSKTFEWMRGRRPITYRAATIAL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHH ALLIVSISLLMAAANWRHGDFVHLSASFGYVLGMAIFVVLATVLKIRLRLFAWLGEISYS HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYLLHGIPLYLLLWACERYGITDLPLGFYMALPVLPAIALSWASHRLCEAPFVRFAHALT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKRRAAAAAAKV CHHHHHHHHCCC >Mature Secondary Structure SDSTRPSRFAHVDAMRAVAVLFVMWTHYAELFDKLAGSQHGLDALQRSVNFGRIGVVIF CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHH FCISGMLIPSSLRGAPAEGTRRFVVRRFFRLYPAFWLSLPLGYLVYWLLFGQRMDASGLL HHHCCHHCCHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH ANVTMIPTAFGRDPVMGHYWTLETELYFYVLCVLLFRIGALHRMRDLCAVCAGLCVLFVV HHHHHCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TSALKIVPASALGQYKGMLYHLAIMFWGACFRQAYEAPSKTFEWMRGRRPITYRAATIAL HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCCHHHHHHHHH ALLIVSISLLMAAANWRHGDFVHLSASFGYVLGMAIFVVLATVLKIRLRLFAWLGEISYS HHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IYLLHGIPLYLLLWACERYGITDLPLGFYMALPVLPAIALSWASHRLCEAPFVRFAHALT HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC PKRRAAAAAAKV CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA