| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126453047
Identifier: 126453047
GI number: 126453047
Start: 2845293
End: 2845661
Strand: Direct
Name: 126453047
Synonym: BURPS1106A_2899
Alternate gene names: NA
Gene position: 2845293-2845661 (Clockwise)
Preceding gene: 126455270
Following gene: 126452075
Centisome position: 71.34
GC content: 70.46
Gene sequence:
>369_bases ATGCGAATCGCAGCCTGCCTTGCCCGTCGACGGCATTCCATTGCCGCAGCGCTCGCTGCGTCGCTTGCCATCGCATGCCC CTATGTCACGGCCGCGCACGAAAACGAAACGTATCGGATCGTCGACACGCGGCCCGAGCACGTTGCCGCACGCGGCCGGG CCGAACGTTGCGCGCGCGTCGATGACGGTGCGTTCGCGCGGCAACGCGATCACGCGCCGATGCCCGTTCCGGTCGCGACG CCAAGGCCGCTCGTCGACGGCACGGCCGTGACGCTGTGGGACGAGATCGGCCCGCCGGCGCCCATGCCCGTGCCGACGGA CGCGCGGCACACGGTTCGCGGCGACGGCGCGAACTATACGCGGCAATGA
Upstream 100 bases:
>100_bases GCGCGCGCATTCGTCCGCGTATTCACACGGCCCGTGCGCTCAATGGATTGCGCACCATGGCATGCATTTCGCTCGATCAC CGGCAAACCGGAGAGACGTC
Downstream 100 bases:
>100_bases CGCATCCGGCCAACGCGCCGCTGCAGCACGCCAACGCGACACGAAGAGGGGACGAGATGACCGCACTGCCCGACGCTTCG CATCCGTCGTCGCGCGTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MRIAACLARRRHSIAAALAASLAIACPYVTAAHENETYRIVDTRPEHVAARGRAERCARVDDGAFARQRDHAPMPVPVAT PRPLVDGTAVTLWDEIGPPAPMPVPTDARHTVRGDGANYTRQ
Sequences:
>Translated_122_residues MRIAACLARRRHSIAAALAASLAIACPYVTAAHENETYRIVDTRPEHVAARGRAERCARVDDGAFARQRDHAPMPVPVAT PRPLVDGTAVTLWDEIGPPAPMPVPTDARHTVRGDGANYTRQ >Mature_122_residues MRIAACLARRRHSIAAALAASLAIACPYVTAAHENETYRIVDTRPEHVAARGRAERCARVDDGAFARQRDHAPMPVPVAT PRPLVDGTAVTLWDEIGPPAPMPVPTDARHTVRGDGANYTRQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13200; Mature: 13200
Theoretical pI: Translated: 8.91; Mature: 8.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIAACLARRRHSIAAALAASLAIACPYVTAAHENETYRIVDTRPEHVAARGRAERCARV CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCHHHHHCCHHHHHHCC DDGAFARQRDHAPMPVPVATPRPLVDGTAVTLWDEIGPPAPMPVPTDARHTVRGDGANYT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCC RQ CC >Mature Secondary Structure MRIAACLARRRHSIAAALAASLAIACPYVTAAHENETYRIVDTRPEHVAARGRAERCARV CCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCHHHHHCCHHHHHHCC DDGAFARQRDHAPMPVPVATPRPLVDGTAVTLWDEIGPPAPMPVPTDARHTVRGDGANYT CCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEECCCCCCCC RQ CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA