| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is kdpA [H]
Identifier: 126453034
GI number: 126453034
Start: 1224120
End: 1225928
Strand: Direct
Name: kdpA [H]
Synonym: BURPS1106A_1249
Alternate gene names: 126453034
Gene position: 1224120-1225928 (Clockwise)
Preceding gene: 126452063
Following gene: 126454417
Centisome position: 30.69
GC content: 68.16
Gene sequence:
>1809_bases ATGAACGCGAACAACCTGTTGCAGGCGGCGATCTTCATCGTCGTCCTGATCGCGGCGGCGGTGCCGGTCGCGCGCTATCT GACGCGCGTGATGGACGGCTCATCGGCCGTGGTGCGCGTGTTCGGCCCGCTCGAGCGCGCGCTGTACCGGCTCGCGGGCA TCGATCCGCGCACCGAGATGAGCTGGAAGCAGTACGCGTTGGCCACCGTCGCGTTCAACGCGCTCGGCGTGCTGTTCCTG TACGCGCTGCTGCGCGTGCAGGGATGGCTGCCCGGCAATCCGCAAGGCTTCGGCCCGATGACGGTGGACGGCGCGCTCAA CACCGCCGTGTCGTTCGTGACGAACACGAACTGGCAGGACTACACGCCCGAGCAGACCGTCAGCTATCTCGCGCAGATGC TCGGCCTCACCGTGCAGAACTTCCTGTCGGCGGCGACGGGCATCGTCGTCGTGCTCGCGCTGATTCGCGGCTTCGCGCGG CATACCGCGCAGACGATCGGCAACTTCTGGGTCGACGTGACGCGCGTGACGCTCTACGTGCTCGTGCCGATGGCGGCGAT CATCGCCGCGCTGCTGATGAGCCAGGGCGTGATCCAGAACACGAAGGCGTACCAGGACGTGCCGACGCTGCAGACGACGT CCTACGCGGCGCCCAGGCTCGACGCGCAGGGCAACCCCGTCAAGGACGCGAAGGGCAACCCGGTGACGGTGCAGACGAGC GTGAAAGCGCAGACGCTCGCGATGGGCCCGGTCGCCTCGCAGGAAGCGATCAAGATGCTCGGCACGAACGGCGGCGGCTT CTTCAACGGCAACTCCTCGCATCCGTACGAGAACCCGACGCCGTTCTCGAACTTCCTCGAGATCTTCGCGATCCTGATCA TTCCGGCCGCGCTCTGCCTCGTGTTCGGCAACACGATCGGGGATCGCCGGCAGGGCGTCGCGGTGCTCGCCGCGATGACG GTCGCGCTCGCGGCGGCGATCGGCATCGAGACGAGCGCGGAGCAGGGCGGCACGCCCGTGCTCGCGTCGCTGAACGTCGA TCAGGCGGCGAGCCCGCTGCAGGCGGGCGGCAACATGGAAGGCAAGGAGACGCGCTTCGGCATCGCGCAGACGGGCCTTT TCGTCGTCGCGACGACGGCCGCGTCGTGCGGCGCCGTCGACGCGATGCACGATTCGCTCACGCCCGTCGGCGGCCTCGTG CCGATGCTGCTGATGCAACTGGGCGAGGTGATCTTCGGCGGCGTCGGCTCCGGCCTCTACGGAATGCTCGTGTTCGCGCT GCTCGCGGTGTTCGTCGCGGGCCTGATGATCGGGCGCACGCCCGAGTACGTCGGCAAGAAGATCGAATCGTACGAGATGA AGATGGTGTCGATCGTCGTGCTGCTCACGCCGCTGCTCGTGCTCGTCGGCACGTCGATCGCCGTGCTCGCCGACGCGGGG CGCGCGGGCATCGCGAATCCGGGCCCGCACGGCTTCTCGGAAATCCTGTATGCGTTCAGCTCGGCCGCGAACAACAACGG CAGCGCGTTCGGCGGGCTTTCGGTGAACACGCCGTTCTACAACTGGATGACGGCGATCGCGATGTGGTTCGGCCGCTTCG GCACGATCGTGCCGGTGCTCGCGATCGCGGGCTCGCTCGCCGCGAAGAAGCGCATCGCCGCGACGAGCGGCACGCTGCCC ACGCACGGCCCGCTGTTCGTCGTGCTGCTGCTCGGCACGGTGCTGCTCGTGGGCGCGCTCACGTACATGCCCGCGCTCGC GCTCGGCCCGGGCGTCGAACACCTGATGCTGTTCGTCGGCGCGCATTGA
Upstream 100 bases:
>100_bases GGGGGGCGTTCATGAGCTGGATGCTATGGTTGGCGGGAGCGTCGACGTTCCTGCTGTTCGCGTATCTCGTCTACGCGCTG CTGCGCGCGGAGGACATCGA
Downstream 100 bases:
>100_bases GCGCGCATCACGACACGAGAGGACTCGCGCAACGCCGGCCGGCCGGCGTTGCGTATCTGAGGATTGCAATGACTCAACAT TCCGCTACGCGATCGATGTT
Product: potassium-transporting ATPase subunit A
Products: NA
Alternate protein names: ATP phosphohydrolase [potassium-transporting] A chain; Potassium-binding and translocating subunit A; Potassium-translocating ATPase A chain [H]
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEMSWKQYALATVAFNALGVLFL YALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQDYTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFAR HTAQTIGNFWVDVTRVTLYVLVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCLVFGNTIGDRRQGVAVLAAMT VALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNMEGKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLV PMLLMQLGEVIFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVLAIAGSLAAKKRIAATSGTLP THGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVGAH
Sequences:
>Translated_602_residues MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEMSWKQYALATVAFNALGVLFL YALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQDYTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFAR HTAQTIGNFWVDVTRVTLYVLVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCLVFGNTIGDRRQGVAVLAAMT VALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNMEGKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLV PMLLMQLGEVIFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVLAIAGSLAAKKRIAATSGTLP THGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVGAH >Mature_602_residues MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEMSWKQYALATVAFNALGVLFL YALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQDYTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFAR HTAQTIGNFWVDVTRVTLYVLVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCLVFGNTIGDRRQGVAVLAAMT VALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNMEGKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLV PMLLMQLGEVIFGGVGSGLYGMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVLAIAGSLAAKKRIAATSGTLP THGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVGAH
Specific function: One of the components of the high-affinity ATP-driven potassium transport (or KDP) system, which catalyzes the hydrolysis of ATP coupled with the exchange of hydrogen and potassium ions [H]
COG id: COG2060
COG function: function code P; K+-transporting ATPase, A chain
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the kdpA family [H]
Homologues:
Organism=Escherichia coli, GI1786915, Length=600, Percent_Identity=55.8333333333333, Blast_Score=638, Evalue=0.0,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004623 [H]
Pfam domain/function: PF03814 KdpA [H]
EC number: =3.6.3.12 [H]
Molecular weight: Translated: 62870; Mature: 62870
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: PS00107 PROTEIN_KINASE_ATP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC SWKQYALATVAFNALGVLFLYALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCC YTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFARHTAQTIGNFWVDVTRVTLYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS HHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCL CCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VFGNTIGDRRQGVAVLAAMTVALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNME HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHCCHHHCCCCCC GKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLVPMLLMQLGEVIFGGVGSGLY CCHHHCCHHHCCCEEEEECCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHH GMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCC RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVL CCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AIAGSLAAKKRIAATSGTLPTHGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC AH CC >Mature Secondary Structure MNANNLLQAAIFIVVLIAAAVPVARYLTRVMDGSSAVVRVFGPLERALYRLAGIDPRTEM CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCC SWKQYALATVAFNALGVLFLYALLRVQGWLPGNPQGFGPMTVDGALNTAVSFVTNTNWQD CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECHHHHHHHHHHCCCCCCC YTPEQTVSYLAQMLGLTVQNFLSAATGIVVVLALIRGFARHTAQTIGNFWVDVTRVTLYV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LVPMAAIIAALLMSQGVIQNTKAYQDVPTLQTTSYAAPRLDAQGNPVKDAKGNPVTVQTS HHHHHHHHHHHHHHCCHHHCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC VKAQTLAMGPVASQEAIKMLGTNGGGFFNGNSSHPYENPTPFSNFLEIFAILIIPAALCL CCHHHHCCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH VFGNTIGDRRQGVAVLAAMTVALAAAIGIETSAEQGGTPVLASLNVDQAASPLQAGGNME HHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCHHHCCHHHCCCCCC GKETRFGIAQTGLFVVATTAASCGAVDAMHDSLTPVGGLVPMLLMQLGEVIFGGVGSGLY CCHHHCCHHHCCCEEEEECCHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHH GMLVFALLAVFVAGLMIGRTPEYVGKKIESYEMKMVSIVVLLTPLLVLVGTSIAVLADAG HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEECCC RAGIANPGPHGFSEILYAFSSAANNNGSAFGGLSVNTPFYNWMTAIAMWFGRFGTIVPVL CCCCCCCCCCCHHHHHHHHHHCCCCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AIAGSLAAKKRIAATSGTLPTHGPLFVVLLLGTVLLVGALTYMPALALGPGVEHLMLFVG HHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHC AH CC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA