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The map label for this gene is yfgL [H]

Identifier: 126452965

GI number: 126452965

Start: 2213563

End: 2214708

Strand: Reverse

Name: yfgL [H]

Synonym: BURPS1106A_2225

Alternate gene names: 126452965

Gene position: 2214708-2213563 (Counterclockwise)

Preceding gene: 126454178

Following gene: 126454834

Centisome position: 55.53

GC content: 69.02

Gene sequence:

>1146_bases
ATGAATCTGCTGAAACGTTACGCTGCACCCGTTGCCTGCGCGGCGGCCGTCCTGGTTCTCGCGGCCTGTTCGTCAACGAA
GGACGCGCGCCGCGTGCCGACGCCGCTCACCGAGTTCAAACCCGTGCTCGACGTGCAGCAGGTGTGGACGGCGAGCGTCG
GCAAGGGCGGCCGCTACTCGTTCTCGCCCGTCGCGGTGGGCGACGCCGTGTATGTCGCCGGCGCGAACGGTTCGGTCGAG
AAGATCGACGCGAAGACGGGCCAGCAAGTCTGGCGTACGAAGATCGGCTCGGACTTGTCGGCGGGCGTCGGCAGCGACGG
CAACCTGACCGCGGTCGGCGCGCTGAAGGGCGGCGTGTTCGTGCTCGGCCCGGACGGCAAGCAGTTGTGGAAAGCCACCG
TGCAAGGCGAGATCTTCTCGCCGCCGCTCGTCGGCAACGGTCTCGTGATCGTGCGCACGATCGACGGCCAGGTGATCGCG
TTCGCCGCGCAGACGGGCGAGCAGAAGTGGACTTACCGCAACCGAGCGGTGCCGCTGAACCTGCGCGTGTCGGCCGGCAT
GACGTTCGCGGGCGACGCCGCGGTGCTCGCGGGCTTCCCGGGCGGCGGCCTCGTCGCGCTGAACCTGCAGACGGGCGAGC
CGTTCTGGCAGACGCCCGTGTCGTTTCCGAAAGGCGTGACCGAAGTCGAGCGGATCAACGACGTGACGGGCGCGCCGACG
CTCGTCGGCGCCGAGACGTGCGCGGTGACGTTCCAGGGGCAGCTCGGCTGCTTCGATGCGAACTCGGGCCGCCCGTTGTG
GGAAAAGCCGTTTTCGAGCCGCAGCGGCGTCGCGCAGGACGATACGGTCGTCGTGGGCGGCGACGACTGGTCGGTCGTGT
CGGCTTACGACGTCGCGACGGGCAAGGCGCTCTGGCGCAACGACAAGCTGAAGAGCCGAGACGTCGGCGTGCCGTACCTG
CTCGGCCGCGCGGTCGTGCTCGGCGACTACAAGGGCTTCGTGCATTTCCTGTCGCGCGATGACGGCACGTTCGTCGCCCG
GATGAAGACGGACGGCAGCGCGATCGCCGCCGCGCCCGTGCTTGCCGGCAACACGCTCGTCGTCCTGACGCAGGACGGCG
GCGTATACGGTTTCCGTCCGCGCTAA

Upstream 100 bases:

>100_bases
ACGACGCATCCGCGCGTCAACTCGTGCAGTTCAAGCTCGACGCGCTCGGCGGCTGAGCGCCCACGCTTTCGTTCTACAAC
TTAACTTTGCTTCGCTATCG

Downstream 100 bases:

>100_bases
GCGCGCGGCGTTTTTTCGCGCGGCCGCGCGCTTCGCCGGCCGCGCGTCGCATTTTTGCGCGCGCGCCGGGCGTTGGCCGG
GTGGGCGCGGCCCGGCGGCG

Product: PQQ repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWTASVGKGGRYSFSPVAVGDAVYVAGANGSVE
KIDAKTGQQVWRTKIGSDLSAGVGSDGNLTAVGALKGGVFVLGPDGKQLWKATVQGEIFSPPLVGNGLVIVRTIDGQVIA
FAAQTGEQKWTYRNRAVPLNLRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT
LVGAETCAVTFQGQLGCFDANSGRPLWEKPFSSRSGVAQDDTVVVGGDDWSVVSAYDVATGKALWRNDKLKSRDVGVPYL
LGRAVVLGDYKGFVHFLSRDDGTFVARMKTDGSAIAAAPVLAGNTLVVLTQDGGVYGFRPR

Sequences:

>Translated_381_residues
MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWTASVGKGGRYSFSPVAVGDAVYVAGANGSVE
KIDAKTGQQVWRTKIGSDLSAGVGSDGNLTAVGALKGGVFVLGPDGKQLWKATVQGEIFSPPLVGNGLVIVRTIDGQVIA
FAAQTGEQKWTYRNRAVPLNLRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT
LVGAETCAVTFQGQLGCFDANSGRPLWEKPFSSRSGVAQDDTVVVGGDDWSVVSAYDVATGKALWRNDKLKSRDVGVPYL
LGRAVVLGDYKGFVHFLSRDDGTFVARMKTDGSAIAAAPVLAGNTLVVLTQDGGVYGFRPR
>Mature_381_residues
MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWTASVGKGGRYSFSPVAVGDAVYVAGANGSVE
KIDAKTGQQVWRTKIGSDLSAGVGSDGNLTAVGALKGGVFVLGPDGKQLWKATVQGEIFSPPLVGNGLVIVRTIDGQVIA
FAAQTGEQKWTYRNRAVPLNLRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT
LVGAETCAVTFQGQLGCFDANSGRPLWEKPFSSRSGVAQDDTVVVGGDDWSVVSAYDVATGKALWRNDKLKSRDVGVPYL
LGRAVVLGDYKGFVHFLSRDDGTFVARMKTDGSAIAAAPVLAGNTLVVLTQDGGVYGFRPR

Specific function: May play a role in a homeostatic control mechanism that coordinates the overall outer membrane assembly process [H]

COG id: COG1520

COG function: function code S; FOG: WD40-like repeat

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To R.prowazekii RP232 [H]

Homologues:

Organism=Escherichia coli, GI1788859, Length=383, Percent_Identity=30.5483028720627, Blast_Score=166, Evalue=2e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017687
- InterPro:   IPR018391
- InterPro:   IPR002372
- InterPro:   IPR011047 [H]

Pfam domain/function: PF01011 PQQ [H]

EC number: NA

Molecular weight: Translated: 39810; Mature: 39810

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWTASVGKGGRYS
CCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
FSPVAVGDAVYVAGANGSVEKIDAKTGQQVWRTKIGSDLSAGVGSDGNLTAVGALKGGVF
CCCEEECCEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEE
VLGPDGKQLWKATVQGEIFSPPLVGNGLVIVRTIDGQVIAFAAQTGEQKWTYRNRAVPLN
EECCCCHHHHHHHHCCCEECCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCEEEEE
LRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT
EEEECCCEECCCCEEEEECCCCCEEEEEEECCCCHHCCCCCCCCCCHHHHHHHCCCCCCE
LVGAETCAVTFQGQLGCFDANSGRPLWEKPFSSRSGVAQDDTVVVGGDDWSVVSAYDVAT
EEECCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCC
GKALWRNDKLKSRDVGVPYLLGRAVVLGDYKGFVHFLSRDDGTFVARMKTDGSAIAAAPV
CCHHHCCCCCCCCCCCCCHHHCCEEEEECCCCEEEEEECCCCEEEEEEECCCCEEEEEEE
LAGNTLVVLTQDGGVYGFRPR
ECCCEEEEEECCCCEECCCCC
>Mature Secondary Structure
MNLLKRYAAPVACAAAVLVLAACSSTKDARRVPTPLTEFKPVLDVQQVWTASVGKGGRYS
CCHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCEE
FSPVAVGDAVYVAGANGSVEKIDAKTGQQVWRTKIGSDLSAGVGSDGNLTAVGALKGGVF
CCCEEECCEEEEECCCCCEEEECCHHHHHHHHHHCCCCCCCCCCCCCCEEEEEECCCCEE
VLGPDGKQLWKATVQGEIFSPPLVGNGLVIVRTIDGQVIAFAAQTGEQKWTYRNRAVPLN
EECCCCHHHHHHHHCCCEECCCCCCCCEEEEEECCCCEEEEEECCCCCCEEECCCEEEEE
LRVSAGMTFAGDAAVLAGFPGGGLVALNLQTGEPFWQTPVSFPKGVTEVERINDVTGAPT
EEEECCCEECCCCEEEEECCCCCEEEEEEECCCCHHCCCCCCCCCCHHHHHHHCCCCCCE
LVGAETCAVTFQGQLGCFDANSGRPLWEKPFSSRSGVAQDDTVVVGGDDWSVVSAYDVAT
EEECCEEEEEEECCEEEEECCCCCCCCCCCCCCCCCCCCCCEEEECCCCCEEEEEEECCC
GKALWRNDKLKSRDVGVPYLLGRAVVLGDYKGFVHFLSRDDGTFVARMKTDGSAIAAAPV
CCHHHCCCCCCCCCCCCCHHHCCEEEEECCCCEEEEEECCCCEEEEEEECCCCEEEEEEE
LAGNTLVVLTQDGGVYGFRPR
ECCCEEEEEECCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]