Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is 126452962

Identifier: 126452962

GI number: 126452962

Start: 3294826

End: 3296943

Strand: Direct

Name: 126452962

Synonym: BURPS1106A_3377

Alternate gene names: NA

Gene position: 3294826-3296943 (Clockwise)

Preceding gene: 126455295

Following gene: 126452352

Centisome position: 82.61

GC content: 70.11

Gene sequence:

>2118_bases
ATGTTCGAATCCCTGACGACCCTGATCAAGAAGTGGCGCGCGTCGCGCAGCGCGAGCCATCAGCTCGACGCGCTCCTCGC
GACGGCCGACGCGAACGCGCCGTACGCGGAACGCGCCGAATGGCTGATCGAGCTCGCGCACTGGCTGCATCGCGACGGCG
CGATGACCGCCGCCGCGCCCGCGCAGCCCGAATCGGGCGAACGCACGTTCGCCGCGCACGCACGGCTGCGCTACGTATTC
CACGTGCTCGACCGCAACCCCGCCTGGAAGACGAACGTCGCGCGCCTGCTGCGCGGCGTGCTGCGCGAAAGCGACGGCAT
CTCGCTCCTGTGCGACGCCGGCATGCCCGTGCATTCGGGCTTCTTCGGCGCGCTTGTCGAGCGCATCGATTCGTCGCTGA
TTCCGCCCGCGCCGAACCGCCGCGAGCTCGCCGCGCTCTTCACGCTGATGTTTCCGGCGCCCGCCGACGCGCAGTGGATC
GACGCGCTGCCCGACGATCTGCTCGCCCGGCTGGCGGAGCTGTTCGCGTTCGACGTGACCGACAAGGAGCGCCACCAGCC
CGGCTCGTTCTCGCGCGACCTGCTCGCCGCGCTGCACAACCTCACCTGCCAGATCAGCTCGACGGGGCTGTCGCAGACCG
TGCGCAGCCGCCTGTCGGACGAGGATGCGCGCACGCCGCTCGAAGCGCAGCCGTTCTACCGGCTCACGCGCGCGATGCTC
GCCGTCGAGACCGCGCAAGCCGCGCTCGACGACGGCGGCGACGCGAGCAAGCTGCTGCACGAGGTCAATTACCTGCGCGT
GCTGCTCGACGAGTGCCGCGTGTCGATCGACGACGTGTTCTCGCACCTGTACCGCAACGGCGTATCGGTCGACATCGTGT
TCCAGGTCGAGCGCATGCGCATGCGCATCCTGCGCGCGGAGACGCTGCTGAACGCCTGGATGGCGCGCGACGATCTGCGC
GGGCTCGCGCGCCTGACGGCCGAGCTCGTCGACGCGAACCAGAACAGCCAGAGCGTGTCGCACCTCGTGCGCAGCAACTT
CGCCCTGTTCGCGCGCAAGCTCGTCGAGACGAACGCGGACACGGGCGAGCACTACATCTCGCGCGGCCGCGCCGAATACC
TGAAGATGCTGCGCATGGCGGCGGGCGGCGGCCTCGTGACGGTCGCCACCGTCTGCATCAAATTCGGGATCACGGGCGCG
CACCTGCAATCGATGTTCGAAGGGCTGCTCGCCGGCATCAACTACGCGGCGAGCTTCATGCTGATGCACTTCCTGCACTT
CACGCTCGCGACGAAGCAGCCGGCGATGACCGCGCCGACGATCGCGCGCGAGCTCGACGGCACCGGCCACGACGAAGGCG
TGAAGCAGTTCGTGTCGTCGGTGATCGCGCTGATCCGCACGCAGGCGGCCGCGATCTGCGGCAACGTGCTCGTCGTGCTG
CCCGTGTGCTTCGCGGTGCAGATGTTCGCGAGCGGCGTGCTGCATGCGAACCTGATCTCGCCGGACAAGGCGCACGCGAC
GCTGAAATCGTTCTCGCTGTTCGGCCCGACGCCGATCTACGCGGCGCTCACGGGTGTGCTGCTGTGGGCGTCGAGCCTGC
TCGCCGGCTGGGCCGACAACTGGTTCGTGCTGCACCGCGTCGGCGACGCGCTCGCGTACAACCGCCGCCTGCGCATCACG
CTCGGCGTCGCGGGCGCGGCAAAGCTCGCGCATTTCTGCCGCTCGAACGTCGCGGGCGTCGTCGGCAACGTCGGGCTCGG
GCTGATGCTCGGCCTCGTGCCGGCGATCGTCAGCGCGTTCGCGTTCTCGTTCGAGGTGCGGCACGTGACGCTGTCCGCCG
GCTCGATCGGTGTCGCGATCGGCGTGCTCGGCAAGGAAACGCTGCGCTCGGCCGAGCTGTGGTGGGCGGTCGCGGGCGTC
TTCAGCATGGCGATCCTCAACGTCGCGGTGAGCTTCGCGCTCGCGTTCACGATGGCGGTACGCTCGCGCAGCCTGCGGCC
GACGAAAGTGCGCGCGCTCGTCGCGGCGATCGGCCGCGCGGTGCTCGCGCGGCCGGCGAGCCTCGTGTGGCCGCCGCGCG
GCGCAGGCGGCGCGGCGGGCGAATCCCGCGCGCACTGA

Upstream 100 bases:

>100_bases
CGACCGAACCACCGCGCGCGAGCCGCCCTTGCGCCTCGCCGCCGGTTTGCGCAGCATCTCGACAGAAACCTGCCCGTAGG
GGCGCCCGATATTCCCGCTT

Downstream 100 bases:

>100_bases
GCGCCCGGCGGGCCGCGCACGCCGACGCAGCCGCATGGCGGCGTAACGGCATTAAGACGTAACGGCATCAAGACGTAACG
GCATCAAGACGTGGCGGCAC

Product: putative membrane proten

Products: NA

Alternate protein names: Site-Specific Recombinase Transmembrane Protein; Site-Specific Recombinase Gcr; Site-Specific Recombinase Prophage Insertion; Site-Specific Recombinase-Like Protein; Site-Specific Recombinase Protein Gcr; Adventurous Gliding Motility Protein AgmG; Adventurous Gliding Motility Protein

Number of amino acids: Translated: 705; Mature: 705

Protein sequence:

>705_residues
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERTFAAHARLRYVF
HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI
DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR
GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA
HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHRVGDALAYNRRLRIT
LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV
FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH

Sequences:

>Translated_705_residues
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERTFAAHARLRYVF
HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI
DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR
GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA
HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHRVGDALAYNRRLRIT
LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV
FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
>Mature_705_residues
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAPAQPESGERTFAAHARLRYVF
HVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSGFFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWI
DALPDDLLARLAELFAFDVTDKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMRMRILRAETLLNAWMARDDLR
GLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNADTGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGA
HLQSMFEGLLAGINYAASFMLMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADNWFVLHRVGDALAYNRRLRIT
LGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAFAFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGV
FSMAILNVAVSFALAFTMAVRSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH

Specific function: Unknown

COG id: COG4389

COG function: function code L; Site-specific recombinase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 76353; Mature: 76353

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAP
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AQPESGERTFAAHARLRYVFHVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
FFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWIDALPDDLLARLAELFAFDVT
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCC
DKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
CHHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHH
MRILRAETLLNAWMARDDLRGLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGAHLQSMFEGLLAGINYAASFM
CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADN
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
WFVLHRVGDALAYNRRLRITLGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAF
CCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGVFSMAILNVAVSFALAFTMAV
HHHHEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
HHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC
>Mature Secondary Structure
MFESLTTLIKKWRASRSASHQLDALLATADANAPYAERAEWLIELAHWLHRDGAMTAAAP
CCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AQPESGERTFAAHARLRYVFHVLDRNPAWKTNVARLLRGVLRESDGISLLCDAGMPVHSG
CCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCC
FFGALVERIDSSLIPPAPNRRELAALFTLMFPAPADAQWIDALPDDLLARLAELFAFDVT
HHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHCCCHHHHHHHHHHHHCCCC
DKERHQPGSFSRDLLAALHNLTCQISSTGLSQTVRSRLSDEDARTPLEAQPFYRLTRAML
CHHCCCCCCCHHHHHHHHHHCEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH
AVETAQAALDDGGDASKLLHEVNYLRVLLDECRVSIDDVFSHLYRNGVSVDIVFQVERMR
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCEEEEEHHHHHH
MRILRAETLLNAWMARDDLRGLARLTAELVDANQNSQSVSHLVRSNFALFARKLVETNAD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCC
TGEHYISRGRAEYLKMLRMAAGGGLVTVATVCIKFGITGAHLQSMFEGLLAGINYAASFM
CHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
LMHFLHFTLATKQPAMTAPTIARELDGTGHDEGVKQFVSSVIALIRTQAAAICGNVLVVL
HHHHHHHHHHCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PVCFAVQMFASGVLHANLISPDKAHATLKSFSLFGPTPIYAALTGVLLWASSLLAGWADN
HHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCC
WFVLHRVGDALAYNRRLRITLGVAGAAKLAHFCRSNVAGVVGNVGLGLMLGLVPAIVSAF
CCHHHHHHHHHHHCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AFSFEVRHVTLSAGSIGVAIGVLGKETLRSAELWWAVAGVFSMAILNVAVSFALAFTMAV
HHHHEEEEEEEECCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RSRSLRPTKVRALVAAIGRAVLARPASLVWPPRGAGGAAGESRAH
HHCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA