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The map label for this gene is omp32 [H]

Identifier: 126452945

GI number: 126452945

Start: 3466818

End: 3467978

Strand: Direct

Name: omp32 [H]

Synonym: BURPS1106A_3561

Alternate gene names: 126452945

Gene position: 3466818-3467978 (Clockwise)

Preceding gene: 126454688

Following gene: 126452513

Centisome position: 86.92

GC content: 64.51

Gene sequence:

>1161_bases
ATGAAAAAGTCGCTTCTCGCGCTCGTCGCGCTGAGCGCGTTTGCTGGCGCGGCTCATGCGCAAAGCAGCGTGACGCTGTA
CGGCATCATCGACGAAGGCTTCAACATCAATACCAATGCAGGCGGCAAGCACCTGTACAACCTGTCGAGCGGTGTCATGC
AGGGTAGCCGTTGGGGCCTGCGCGGCACGGAAGACCTGGGCGGTGGCCTGAAGGCGCTGTTCGTCCTCGAAAACGGCTTC
GACGTGAACTCGGGCAAGCTGAACCAGGGCGGCCTCGAATTCGGCCGTCAAGCGTACGTCGGCCTGTCGAGCGGCTTCGG
CACCGTCACGCTCGGCCGTCAGTACGACTCCGTCGTCGACTTCGTCGGCCCGCTGGAAGCCGGCGACCAGTGGGGCGGCT
ACATCGCCGCTCACCCGGGCGATCTCGACAACTTCAACAACGCATATCGCGTGAACAACGCAGTCAAGTTCACGAGCGCG
AACTACGGCGGCTTCACGTTCGGCGGCCTGTACAGCTTCGGCGGCGTCGCCGGCGACTTCAGCCGCAACCAGACCTGGTC
GCTCGGCGCGGGCTACACGAACGGCCCGCTCGTGTTGGGCGTCGGCTACCTGAACGCGCGCACGCCGTCGACGGCTGGCG
GCCTGTTCGGCAACAACACGACGTCGAGCACGCCGGCTGCCGTGACGACCCCGGTCTACGCGGGCTATGCGTCGGCCCAT
ACGTACCAGGTGATCGGTGCGGGCGGCGCCTATTCGTTCGGCGCGGCGACGGTCGGCATCACGTACTCGAACATCAAGTT
CATGAACTTCGCGAGCACGGTGTTCCCGAACCAGACCGCGACGTTCAACAACGCGGAAATCAACTTCAAGTATCAGTTGA
CCCCGACGCTGCTCGCCGGCGCGGCGTATGACTACACGCAAGGCAGCAAGATCGCCGGCTCGTCCGCGGCCAAGTATCAC
CAAGGCTCGGTCGGCGTCGACTACTTCCTGTCGAAGCGCACCGACGTCTACGCGATCGGCGTGTATCAGCACGCTTCGGG
CAACGTGATCGAAGCCGACGGCAACACGGTCGGCCCGGCGACCGCCGCGATCAACGGCCTGACGCCGTCGTCGAACCGCA
ACCAGTTCGCAGCGCGCGTCGGCATCCGCCATAAGTTCTAA

Upstream 100 bases:

>100_bases
CTACATTACGAGCGGCTTCATTCGAAGTTCACGCGGGCATCGCCATCAAAAACAATCATCAGCCCGCCACAATAAATTTG
TCATCCTTGGAGATCTTTTA

Downstream 100 bases:

>100_bases
TAAGCGGGTAACGCTCGGCAGTAACTTAAAAGGCGCCCCAGGGCGCCTTCAGACTGCTGACGAACCCCACGTTTTTGTGA
GCGTGGGGTTTTGTCTTTCT

Product: outer membrane porin

Products: NA

Alternate protein names: OMP32 [H]

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKKSLLALVALSAFAGAAHAQSSVTLYGIIDEGFNINTNAGGKHLYNLSSGVMQGSRWGLRGTEDLGGGLKALFVLENGF
DVNSGKLNQGGLEFGRQAYVGLSSGFGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSA
NYGGFTFGGLYSFGGVAGDFSRNQTWSLGAGYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSTPAAVTTPVYAGYASAH
TYQVIGAGGAYSFGAATVGITYSNIKFMNFASTVFPNQTATFNNAEINFKYQLTPTLLAGAAYDYTQGSKIAGSSAAKYH
QGSVGVDYFLSKRTDVYAIGVYQHASGNVIEADGNTVGPATAAINGLTPSSNRNQFAARVGIRHKF

Sequences:

>Translated_386_residues
MKKSLLALVALSAFAGAAHAQSSVTLYGIIDEGFNINTNAGGKHLYNLSSGVMQGSRWGLRGTEDLGGGLKALFVLENGF
DVNSGKLNQGGLEFGRQAYVGLSSGFGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSA
NYGGFTFGGLYSFGGVAGDFSRNQTWSLGAGYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSTPAAVTTPVYAGYASAH
TYQVIGAGGAYSFGAATVGITYSNIKFMNFASTVFPNQTATFNNAEINFKYQLTPTLLAGAAYDYTQGSKIAGSSAAKYH
QGSVGVDYFLSKRTDVYAIGVYQHASGNVIEADGNTVGPATAAINGLTPSSNRNQFAARVGIRHKF
>Mature_386_residues
MKKSLLALVALSAFAGAAHAQSSVTLYGIIDEGFNINTNAGGKHLYNLSSGVMQGSRWGLRGTEDLGGGLKALFVLENGF
DVNSGKLNQGGLEFGRQAYVGLSSGFGTVTLGRQYDSVVDFVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSA
NYGGFTFGGLYSFGGVAGDFSRNQTWSLGAGYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSTPAAVTTPVYAGYASAH
TYQVIGAGGAYSFGAATVGITYSNIKFMNFASTVFPNQTATFNNAEINFKYQLTPTLLAGAAYDYTQGSKIAGSSAAKYH
QGSVGVDYFLSKRTDVYAIGVYQHASGNVIEADGNTVGPATAAINGLTPSSNRNQFAARVGIRHKF

Specific function: Forms anion selective channels [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To bacterial outer membrane proteins and porins [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001702
- InterPro:   IPR002299 [H]

Pfam domain/function: PF00267 Porin_1 [H]

EC number: NA

Molecular weight: Translated: 40188; Mature: 40188

Theoretical pI: Translated: 9.10; Mature: 9.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLLALVALSAFAGAAHAQSSVTLYGIIDEGFNINTNAGGKHLYNLSSGVMQGSRWGL
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCCCCCEEEECHHHHCCCCCCCC
RGTEDLGGGLKALFVLENGFDVNSGKLNQGGLEFGRQAYVGLSSGFGTVTLGRQYDSVVD
CCCHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHCCEEEEEECCCCCEEEECCCHHHHHH
FVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSANYGGFTFGGLYSFGGVAGDF
HHCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCEEECHHHHCCCCCCCC
SRNQTWSLGAGYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSTPAAVTTPVYAGYASAH
CCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCE
TYQVIGAGGAYSFGAATVGITYSNIKFMNFASTVFPNQTATFNNAEINFKYQLTPTLLAG
EEEEEECCCCCCCCCEEEEEEECCEEEEEEHHHHCCCCCCEECCCEEEEEEEECHHHEEC
AAYDYTQGSKIAGSSAAKYHQGSVGVDYFLSKRTDVYAIGVYQHASGNVIEADGNTVGPA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEHCCCCCCEEEEEEEEECCCCEEECCCCCCCCH
TAAINGLTPSSNRNQFAARVGIRHKF
HHEEECCCCCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKKSLLALVALSAFAGAAHAQSSVTLYGIIDEGFNINTNAGGKHLYNLSSGVMQGSRWGL
CCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCEEECCCCCCCEEEECHHHHCCCCCCCC
RGTEDLGGGLKALFVLENGFDVNSGKLNQGGLEFGRQAYVGLSSGFGTVTLGRQYDSVVD
CCCHHHCCCEEEEEEEECCCCCCCCCCCCCCHHHCCEEEEEECCCCCEEEECCCHHHHHH
FVGPLEAGDQWGGYIAAHPGDLDNFNNAYRVNNAVKFTSANYGGFTFGGLYSFGGVAGDF
HHCCCCCCCCCCCEEEECCCCCCCCCCEEEECCEEEEECCCCCCEEECHHHHCCCCCCCC
SRNQTWSLGAGYTNGPLVLGVGYLNARTPSTAGGLFGNNTTSSTPAAVTTPVYAGYASAH
CCCCEEEECCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEECCEEECCCCCE
TYQVIGAGGAYSFGAATVGITYSNIKFMNFASTVFPNQTATFNNAEINFKYQLTPTLLAG
EEEEEECCCCCCCCCEEEEEEECCEEEEEEHHHHCCCCCCEECCCEEEEEEEECHHHEEC
AAYDYTQGSKIAGSSAAKYHQGSVGVDYFLSKRTDVYAIGVYQHASGNVIEADGNTVGPA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEHCCCCCCEEEEEEEEECCCCEEECCCCCCCCH
TAAINGLTPSSNRNQFAARVGIRHKF
HHEEECCCCCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1848840 [H]