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The map label for this gene is ctaG [H]

Identifier: 126452936

GI number: 126452936

Start: 474855

End: 475460

Strand: Direct

Name: ctaG [H]

Synonym: BURPS1106A_0510

Alternate gene names: 126452936

Gene position: 474855-475460 (Clockwise)

Preceding gene: 126454049

Following gene: 126451723

Centisome position: 11.91

GC content: 65.51

Gene sequence:

>606_bases
ATGTCGAAGTCCGAGGCGAACGTCGATCGCGCGTTCAACCGGTCGATGCTCTTGAAGCTCGTCGTCGTGGCGGGGCTGAT
GTTCGGCTTCGGCTTCGCGCTGGTGCCGATGTATCGCGCGATCTGCCAGATCACCGGCATCAACAATCTGCTGCAGCGCG
ACGTCAGCGCGCGCGAGGCGAAGAACACGCAGGTCGATTACACCCGGACGGTGTCGATCGAGCTCGACGCGAACGCGCGC
GGCCCGCTCGGCTTCAAGCCGCGGCGCAACAGCATCGACGTGCATCCGGGCGAGTTGGCGACGGTCGTCTACGAAGTGAC
GAACGGGCAGGGCAGGACGGTGGTCGCGCAGGCGATTCCGAGCTATGCGCCGAAGCAGGCCACCGAGTTCTTCAAGAAGA
TCGAGTGCTTCTGCTTCACGCAACAGACGCTGGCGGCGAACGAGACGCGCGACATGCCGGTCGTGTTCGTGATCGATCCG
AAGCTGCCGAAGGACGTGAAGACGATCACGCTGTCGTACACGTTCTTCGAGCTGAACACGCCCGCGCCCGCGGTGAAGGG
CGCGGCGGTGCAGACGGGCGGCGCCGCGGCGAAGCCCGCCGCGTGA

Upstream 100 bases:

>100_bases
GCTCTTGATCCTGCTCATCGTCGTCGCCGTTTTCTTTGTGGGTGCCGTCGTCCGGCAGTGGATTGCGTCCACGTCCTGAC
GCAGTATTGAGGAAGTCCTG

Downstream 100 bases:

>100_bases
CATTGAGGAGGCGACGGTGGTGAGCGGAACCGGCAACAAGAGTACGTTCGTCCAGACGATCAAGGCGGTGATGTGGTCGT
TCTTCGGCGTGCGCAAGCGG

Product: cytochrome C oxidase assembly protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 201; Mature: 200

Protein sequence:

>201_residues
MSKSEANVDRAFNRSMLLKLVVVAGLMFGFGFALVPMYRAICQITGINNLLQRDVSAREAKNTQVDYTRTVSIELDANAR
GPLGFKPRRNSIDVHPGELATVVYEVTNGQGRTVVAQAIPSYAPKQATEFFKKIECFCFTQQTLAANETRDMPVVFVIDP
KLPKDVKTITLSYTFFELNTPAPAVKGAAVQTGGAAAKPAA

Sequences:

>Translated_201_residues
MSKSEANVDRAFNRSMLLKLVVVAGLMFGFGFALVPMYRAICQITGINNLLQRDVSAREAKNTQVDYTRTVSIELDANAR
GPLGFKPRRNSIDVHPGELATVVYEVTNGQGRTVVAQAIPSYAPKQATEFFKKIECFCFTQQTLAANETRDMPVVFVIDP
KLPKDVKTITLSYTFFELNTPAPAVKGAAVQTGGAAAKPAA
>Mature_200_residues
SKSEANVDRAFNRSMLLKLVVVAGLMFGFGFALVPMYRAICQITGINNLLQRDVSAREAKNTQVDYTRTVSIELDANARG
PLGFKPRRNSIDVHPGELATVVYEVTNGQGRTVVAQAIPSYAPKQATEFFKKIECFCFTQQTLAANETRDMPVVFVIDPK
LPKDVKTITLSYTFFELNTPAPAVKGAAVQTGGAAAKPAA

Specific function: Exerts its effect at some terminal stage of cytochrome c oxidase synthesis, probably by being involved in the insertion of the copper B into subunit I [H]

COG id: COG3175

COG function: function code O; Cytochrome oxidase assembly factor

Gene ontology:

Cell location: Cell inner membrane; Single-pass type II membrane protein; Periplasmic side (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the COX11/CtaG family [H]

Homologues:

Organism=Homo sapiens, GI4758034, Length=184, Percent_Identity=34.2391304347826, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI71990692, Length=178, Percent_Identity=33.7078651685393, Blast_Score=100, Evalue=8e-22,
Organism=Saccharomyces cerevisiae, GI6325125, Length=177, Percent_Identity=36.1581920903955, Blast_Score=108, Evalue=4e-25,
Organism=Drosophila melanogaster, GI24581944, Length=189, Percent_Identity=33.3333333333333, Blast_Score=101, Evalue=3e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007533 [H]

Pfam domain/function: PF04442 CtaG_Cox11 [H]

EC number: NA

Molecular weight: Translated: 21862; Mature: 21731

Theoretical pI: Translated: 9.69; Mature: 9.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKSEANVDRAFNRSMLLKLVVVAGLMFGFGFALVPMYRAICQITGINNLLQRDVSAREA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC
KNTQVDYTRTVSIELDANARGPLGFKPRRNSIDVHPGELATVVYEVTNGQGRTVVAQAIP
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHHHCC
SYAPKQATEFFKKIECFCFTQQTLAANETRDMPVVFVIDPKLPKDVKTITLSYTFFELNT
CCCCHHHHHHHHHHHHHEECHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEECC
PAPAVKGAAVQTGGAAAKPAA
CCCCCCCCEEECCCCCCCCCC
>Mature Secondary Structure 
SKSEANVDRAFNRSMLLKLVVVAGLMFGFGFALVPMYRAICQITGINNLLQRDVSAREA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHC
KNTQVDYTRTVSIELDANARGPLGFKPRRNSIDVHPGELATVVYEVTNGQGRTVVAQAIP
CCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEHHHHCC
SYAPKQATEFFKKIECFCFTQQTLAANETRDMPVVFVIDPKLPKDVKTITLSYTFFELNT
CCCCHHHHHHHHHHHHHEECHHHHHCCCCCCCCEEEEECCCCCCCEEEEEEEEEEEEECC
PAPAVKGAAVQTGGAAAKPAA
CCCCCCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA