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The map label for this gene is metI [H]

Identifier: 126452932

GI number: 126452932

Start: 2873755

End: 2874408

Strand: Reverse

Name: metI [H]

Synonym: BURPS1106A_2930

Alternate gene names: 126452932

Gene position: 2874408-2873755 (Counterclockwise)

Preceding gene: 126452044

Following gene: 126453440

Centisome position: 72.07

GC content: 66.67

Gene sequence:

>654_bases
ATGTTGAGTGAAATGTTCGATATGTTCGTGCAGTCGTTCTGGGAGACGCTGATCATGGTCGGCATCTCCGGAGCGGTCGG
CGCGCTCGTCGGCCTGCCGCTCGGCGTGCTGCTCTATTTGACCGATCGCCAGGGCGTGCTGCAGAACCTCGCGGTGAACC
GCGTGCTGGGCGGCGTCGTCAACGCGGTGCGCTCGACGCCGTTCATCATCCTGCTCGTCGCGGTGATTCCGTTTACGCGT
CTCGCCGTCGGCTCGTCGATCGGCACCGCGGCGGCCGTCGTGCCGCTCACGATCGCGGCGGCCCCGTTCATCGCGCGGCT
CGTCGAGACGGCGCTGCGCGAAGTCGATCGCGGCCTCATCGAAGCCGCGCAGGCAATGGGCGCGACGACGGGCCAGATCG
TGTTCAAGGTGCTGTTGCCCGAATCGCTGCCCGGCATCGTCGCGGGGCTCACCATCACGTTCGTGTCGCTCGTCGGCTAT
TCGGCGATGGCGGGCGCGATCGGCGGCGGCGGCCTGGGCGACCTCGGCATCCGCTACGGCTATCAGCGCTATTTGCCCGA
AGTGATGTGGACGGTCGTCGCGATCCTGATCGTGTTCGTGCAGATCGTGCAGTCGTTCGGCGACTGGCTCGTGCGGCGCC
TGAGCCACAAGTAG

Upstream 100 bases:

>100_bases
TTCGGTTCGCTCGCGGTGCTCGCCACGGGCGAGCCGGGCAAGGTGGGGCAGGCGTTCGCGTATCTGCGCGAGCAGGGCGT
GGTCGTCGAGGAGCTTTCGT

Downstream 100 bases:

>100_bases
GAAGACCATCGAAGACGCACGAGCGCCGCGCTTGGATACGCGACGGCGCCGCCACCGCAGAGGAGATCCGAAGATGCAAC
GAAGAACGATGCTCAAGCTC

Product: D-methionine ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 217; Mature: 217

Protein sequence:

>217_residues
MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVVNAVRSTPFIILLVAVIPFTR
LAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLIEAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGY
SAMAGAIGGGGLGDLGIRYGYQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK

Sequences:

>Translated_217_residues
MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVVNAVRSTPFIILLVAVIPFTR
LAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLIEAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGY
SAMAGAIGGGGLGDLGIRYGYQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK
>Mature_217_residues
MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVVNAVRSTPFIILLVAVIPFTR
LAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLIEAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGY
SAMAGAIGGGGLGDLGIRYGYQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK

Specific function: Part of the binding-protein-dependent transport system for D-methionine. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG2011

COG function: function code P; ABC-type metal ion transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1786397, Length=217, Percent_Identity=54.3778801843318, Blast_Score=186, Evalue=1e-48,
Organism=Escherichia coli, GI1789033, Length=150, Percent_Identity=32, Blast_Score=62, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 22930; Mature: 22930

Theoretical pI: Translated: 8.91; Mature: 8.91

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
NAVRSTPFIILLVAVIPFTRLAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI
HHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
YQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLSEMFDMFVQSFWETLIMVGISGAVGALVGLPLGVLLYLTDRQGVLQNLAVNRVLGGVV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
NAVRSTPFIILLVAVIPFTRLAVGSSIGTAAAVVPLTIAAAPFIARLVETALREVDRGLI
HHHHHCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EAAQAMGATTGQIVFKVLLPESLPGIVAGLTITFVSLVGYSAMAGAIGGGGLGDLGIRYG
HHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
YQRYLPEVMWTVVAILIVFVQIVQSFGDWLVRRLSHK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10952301 [H]