Click here to switch to the map view.

The map label for this gene is 126452843

Identifier: 126452843

GI number: 126452843

Start: 2244906

End: 2245514

Strand: Direct

Name: 126452843

Synonym: BURPS1106A_2259

Alternate gene names: NA

Gene position: 2244906-2245514 (Clockwise)

Preceding gene: 126452070

Following gene: 126453121

Centisome position: 56.29

GC content: 71.92

Gene sequence:

>609_bases
ATGCTGAAAAAGCTGCTGATGCTGGTCGTCGCACTGTCGCTTTCGCTGACCGCCGCGCTCGCCGCCGCGGTCGAAGTCAA
CACCGCCGACCAGGCGGCGCTCGAATCGGTGAAGGGCCTCGGCCCGGTGAAATCGAAGGCGATCATCGACGAGCGCGCGA
AGAACGGCCCGTTCAAGGATGCCGACGATCTCGCGAACCGCGTGAAGGGTCTCGGCGCGAAATCGGTCGCCCATCTCGAG
GCAGCGGGCCTGACGATCGGCGGCTCGACCACGCCGCCGACGGGCGCGAAGGCGAAGACCGGCACCGCGAAACCGGCCGC
GACCGCGACGCCGGCGCCCGCTCCGGCACCGGCCCCGACCACCTCGAGCGCAACGCCCGCGCCGTCCGCGGCGACGCCCG
CTCCCGCCACGGCCACGCCGTCGACTGCGGCGAGCGCCCCGGCCGCGAAAAAGTCCCGTTCGTCGAAGAAGCAGGACAAG
GCCGCCGCCGCGAGCGCCGCGGCGCAAGCGAGCGCGCCGGCCGCCGCGTCGACGACGAAGGCGAAAGGCTCGAAGAAGAG
CAGGAAGAACAAGGCGGCGACGCCGGCGTCCGCGGCATCGGGCGCATAA

Upstream 100 bases:

>100_bases
ACGCATTTGTCCTATGCTTGAACGCGACGCCCGGCTCGCGCCGCGCGCCGGCTTCGTTCCGACAGCCACTCACCCGTTCC
ATCAAAAGGGAGCTCCCGCC

Downstream 100 bases:

>100_bases
GTCGGGCGCCGCGCGACGCGCGGCGTCTTCGTTCCACCGGCGCCGTGCGCGGCGCCGCCTCAACCTAGCAGGTGAATCAT
GGGTCTACTCGACATCGTTG

Product: putative comE protein

Products: NA

Alternate protein names: DNA Uptake Protein; ComEA-Related Signal Peptide Protein; Helix-Hairpin-Helix Motif Protein; Competence Protein ComEA Helix-Hairpin-Helix Region; DNA Uptake Protein ComEA-Like; Helix-Turn-Helix Protein; ComE Protein

Number of amino acids: Translated: 202; Mature: 202

Protein sequence:

>202_residues
MLKKLLMLVVALSLSLTAALAAAVEVNTADQAALESVKGLGPVKSKAIIDERAKNGPFKDADDLANRVKGLGAKSVAHLE
AAGLTIGGSTTPPTGAKAKTGTAKPAATATPAPAPAPAPTTSSATPAPSAATPAPATATPSTAASAPAAKKSRSSKKQDK
AAAASAAAQASAPAAASTTKAKGSKKSRKNKAATPASAASGA

Sequences:

>Translated_202_residues
MLKKLLMLVVALSLSLTAALAAAVEVNTADQAALESVKGLGPVKSKAIIDERAKNGPFKDADDLANRVKGLGAKSVAHLE
AAGLTIGGSTTPPTGAKAKTGTAKPAATATPAPAPAPAPTTSSATPAPSAATPAPATATPSTAASAPAAKKSRSSKKQDK
AAAASAAAQASAPAAASTTKAKGSKKSRKNKAATPASAASGA
>Mature_202_residues
MLKKLLMLVVALSLSLTAALAAAVEVNTADQAALESVKGLGPVKSKAIIDERAKNGPFKDADDLANRVKGLGAKSVAHLE
AAGLTIGGSTTPPTGAKAKTGTAKPAATATPAPAPAPAPTTSSATPAPSAATPAPATATPSTAASAPAAKKSRSSKKQDK
AAAASAAAQASAPAAASTTKAKGSKKSRKNKAATPASAASGA

Specific function: Unknown

COG id: COG1555

COG function: function code L; DNA uptake protein and related DNA-binding proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19308; Mature: 19308

Theoretical pI: Translated: 11.14; Mature: 11.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKKLLMLVVALSLSLTAALAAAVEVNTADQAALESVKGLGPVKSKAIIDERAKNGPFKD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
ADDLANRVKGLGAKSVAHLEAAGLTIGGSTTPPTGAKAKTGTAKPAATATPAPAPAPAPT
HHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSSATPAPSAATPAPATATPSTAASAPAAKKSRSSKKQDKAAAASAAAQASAPAAASTTK
CCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AKGSKKSRKNKAATPASAASGA
HCCCHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLKKLLMLVVALSLSLTAALAAAVEVNTADQAALESVKGLGPVKSKAIIDERAKNGPFKD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
ADDLANRVKGLGAKSVAHLEAAGLTIGGSTTPPTGAKAKTGTAKPAATATPAPAPAPAPT
HHHHHHHHHCCCHHHHHHHHHCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
TSSATPAPSAATPAPATATPSTAASAPAAKKSRSSKKQDKAAAASAAAQASAPAAASTTK
CCCCCCCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
AKGSKKSRKNKAATPASAASGA
HCCCHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA