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The map label for this gene is madM

Identifier: 126452836

GI number: 126452836

Start: 1437018

End: 1437785

Strand: Direct

Name: madM

Synonym: BURPS1106A_1481

Alternate gene names: NA

Gene position: 1437018-1437785 (Clockwise)

Preceding gene: 126453090

Following gene: 126451719

Centisome position: 36.03

GC content: 71.88

Gene sequence:

>768_bases
ATGATCGACATGCTCGGAAAGGTCGTCGCGCACAACGGGCTCGTCGCGTCGTTCGCGCTCGTCGGCTGCGTCATGTTCGC
GTCGGCGGCGCTGTCGAGGAAGCTCACGCTCGGCCGCGTGCACGGCTCGGCGATCGCGATCGTGATCGGCCTCGCGCTCG
CGTACGCCGGCGGCGCGTACACGGGCGGCGAGAAAGGTATCGCCGACGTGCCGCTGTTCGCGGGCGTCGGCCTGATGGGC
GGCGCGATGCTGCGCGATTTCGCGATCGTCGCGACGGCGTTCGAGGTGCAGCCCGCGCAAGCGCGCAAGGCGGGGCTCGT
CGGCGCCGTGTCGCTGCTGCTCGGCACGGTGCTGCCGTTCATCGTCGGCGCGAGCGTCGCGCGCGCGTTCGGCTATTCGG
ACGCGGTCAGCATGACGACGATCGGCGCGGGCGCCGTCACGTACATCGTCGGCCCCGTGACGGGCGCGGCGATCGGCGCG
AGCTCCGACGTGATCGCGCTCGGCATCGCGACAGGCCTCGTGAAGGCGGTCATCGTGATGGTCGGCACGCCGTTCGCGGC
GGGCTTCATGGGGCTGCGCACGCCGCGCGCGGCGATGATCTTCGGTGGGCTCGCGGGCACCGTGAGCGGCGTGAGCGCCG
GGCTCGCGGCGACCGACCGGCGGCTCGTGCCGTACGGCGCGCTGATCGCGACGTTCCATACGGGCGTCGGGTGTCTGCTC
GGGCCGTCGCTATTGTTTTTCGCGACGAAGGCGGCGATGGGCGGGTGA

Upstream 100 bases:

>100_bases
GTGTGCGTGCTGAGCATCGCGGCGCTCGCGCGCGTGGGCCACGACGCGACATCGCTCGCGGCGCTGCCGCGGCCCGAACA
GAACTGACGGGGAGGCGGCC

Downstream 100 bases:

>100_bases
GTCGGCGCATGAGGGCGCGCGTGGCGTTGTTCCGTGAAAGCGCCCGTGAAATCGCCCGTGACATCGCGTGCGGCAACGAG
GCGGCGCGTGCCGCGCGAGG

Product: malonate transporter, MadM subunit

Products: NA

Alternate protein names: Malonate/Sodium Symporter MadM Subunit; Malonate Transporter; Malonate Transporter Subunit MadM; MalonateSodium Symporter Subunit MadM; Malonate Transporter-Like Membrane Protein; Facilitator Superfamily Transporter; Malonate Transporter M Subunit; Signal Transduction Histidine Kinase LytS

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MIDMLGKVVAHNGLVASFALVGCVMFASAALSRKLTLGRVHGSAIAIVIGLALAYAGGAYTGGEKGIADVPLFAGVGLMG
GAMLRDFAIVATAFEVQPAQARKAGLVGAVSLLLGTVLPFIVGASVARAFGYSDAVSMTTIGAGAVTYIVGPVTGAAIGA
SSDVIALGIATGLVKAVIVMVGTPFAAGFMGLRTPRAAMIFGGLAGTVSGVSAGLAATDRRLVPYGALIATFHTGVGCLL
GPSLLFFATKAAMGG

Sequences:

>Translated_255_residues
MIDMLGKVVAHNGLVASFALVGCVMFASAALSRKLTLGRVHGSAIAIVIGLALAYAGGAYTGGEKGIADVPLFAGVGLMG
GAMLRDFAIVATAFEVQPAQARKAGLVGAVSLLLGTVLPFIVGASVARAFGYSDAVSMTTIGAGAVTYIVGPVTGAAIGA
SSDVIALGIATGLVKAVIVMVGTPFAAGFMGLRTPRAAMIFGGLAGTVSGVSAGLAATDRRLVPYGALIATFHTGVGCLL
GPSLLFFATKAAMGG
>Mature_255_residues
MIDMLGKVVAHNGLVASFALVGCVMFASAALSRKLTLGRVHGSAIAIVIGLALAYAGGAYTGGEKGIADVPLFAGVGLMG
GAMLRDFAIVATAFEVQPAQARKAGLVGAVSLLLGTVLPFIVGASVARAFGYSDAVSMTTIGAGAVTYIVGPVTGAAIGA
SSDVIALGIATGLVKAVIVMVGTPFAAGFMGLRTPRAAMIFGGLAGTVSGVSAGLAATDRRLVPYGALIATFHTGVGCLL
GPSLLFFATKAAMGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25005; Mature: 25005

Theoretical pI: Translated: 10.20; Mature: 10.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHCCC
>Mature Secondary Structure
MIDMLGKVVAHNGLVASFALVGCVMFASAALSRKLTLGRVHGSAIAIVIGLALAYAGGAY
CHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCC
TGGEKGIADVPLFAGVGLMGGAMLRDFAIVATAFEVQPAQARKAGLVGAVSLLLGTVLPF
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
IVGASVARAFGYSDAVSMTTIGAGAVTYIVGPVTGAAIGASSDVIALGIATGLVKAVIVM
HHHHHHHHHHCCCCCHHHHHCCCCHHHHEECCCCCHHCCCCCCCHHHHHHHHHHHHHHHH
VGTPFAAGFMGLRTPRAAMIFGGLAGTVSGVSAGLAATDRRLVPYGALIATFHTGVGCLL
HCCCHHHHHHHCCCCHHHHHHCCHHHHHHHHHHCHHHCCCCCCHHHHHHHHHHHCHHHHH
GPSLLFFATKAAMGG
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA