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The map label for this gene is ybeB [C]

Identifier: 126452827

GI number: 126452827

Start: 1214382

End: 1214846

Strand: Reverse

Name: ybeB [C]

Synonym: BURPS1106A_1236

Alternate gene names: 126452827

Gene position: 1214846-1214382 (Counterclockwise)

Preceding gene: 126453400

Following gene: 126453487

Centisome position: 30.46

GC content: 69.46

Gene sequence:

>465_bases
ATGGACATTCGCAAACTCCAGCGCGTAATCGTCGACGCTCTCGAAGACGTCAAGGCGCAAGACATCAAAGTGTTCAACAC
GAGCCACCTGACCGAGCTGTTCGACCGCGTGATCGTCGCGTCGGGCACGTCGAACCGGCAAACGAAGGCGCTCGCGTCGA
ACGTGCGCGACAAGGTCAAGGAAGCCGGCGGCGACATCGTCAGCTCCGAGGGCGAGGACACGGGCGAATGGGTGCTCGTC
GACTGCGGCGACGCGGTCGTCCACATCCTGCAGCCGGCGCTGCGCCAGTACTACAACCTCGAGGAGATCTGGGGCGACAA
GCCGGTGCGGATGAAGCTCGGCGGCCCGGCGGCGCACGCGCGCGGCGCGCGGGCGGCCGACGGCGCGGACGACGACGAAT
CGGACGAGCACGAGACGCCCGCCGCGCGCCCCGCCCGCAAGGCGACGGCCGCGCGCCGCCGCTGA

Upstream 100 bases:

>100_bases
ATCGCGCGCCGCGCGCAGGTGCCCGACGCGTCGGCCGAGCACGTGAGCCCCGCCGTCTGGGCCTATATTCTCCAACATCG
TCTCTACCACCCCTGATTCC

Downstream 100 bases:

>100_bases
GCGCGCGCCGCCGTTTCGTCGCCTTCATTGTTGTCACTTTCGTCGCGTTCGCCGTCATGAAACTGCACATCGTCGCGGTC
GGCCACAAGATGCCCGGCTG

Product: iojap domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 154; Mature: 154

Protein sequence:

>154_residues
MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASNVRDKVKEAGGDIVSSEGEDTGEWVLV
DCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGPAAHARGARAADGADDDESDEHETPAARPARKATAARRR

Sequences:

>Translated_154_residues
MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASNVRDKVKEAGGDIVSSEGEDTGEWVLV
DCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGPAAHARGARAADGADDDESDEHETPAARPARKATAARRR
>Mature_154_residues
MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASNVRDKVKEAGGDIVSSEGEDTGEWVLV
DCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGPAAHARGARAADGADDDESDEHETPAARPARKATAARRR

Specific function: Unknown

COG id: COG0799

COG function: function code S; Uncharacterized homolog of plant Iojap protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the Iojap family [H]

Homologues:

Organism=Escherichia coli, GI87081768, Length=101, Percent_Identity=33.6633663366337, Blast_Score=78, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004394 [H]

Pfam domain/function: PF02410 DUF143 [H]

EC number: NA

Molecular weight: Translated: 16859; Mature: 16859

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASNVRDKVK
CCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EAGGDIVSSEGEDTGEWVLVDCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGPAAHA
HHCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCHHHH
RGARAADGADDDESDEHETPAARPARKATAARRR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MDIRKLQRVIVDALEDVKAQDIKVFNTSHLTELFDRVIVASGTSNRQTKALASNVRDKVK
CCHHHHHHHHHHHHHHHHHHHEEEECHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
EAGGDIVSSEGEDTGEWVLVDCGDAVVHILQPALRQYYNLEEIWGDKPVRMKLGGPAAHA
HHCCCEECCCCCCCCCEEEEECCHHHHHHHHHHHHHHCCHHHHHCCCCEEEEECCCHHHH
RGARAADGADDDESDEHETPAARPARKATAARRR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]