| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126452799
Identifier: 126452799
GI number: 126452799
Start: 3922121
End: 3922534
Strand: Reverse
Name: 126452799
Synonym: BURPS1106A_4018
Alternate gene names: NA
Gene position: 3922534-3922121 (Counterclockwise)
Preceding gene: 126454461
Following gene: 126451919
Centisome position: 98.35
GC content: 73.91
Gene sequence:
>414_bases ATGGATTGGTTCAAGTGGCTTGCCGGCGGGCGGCATCGCGGCTACGGCGGCCGCCGCGGCCATCACGGCGGTGAAGCGGG CGGCGGGCATGGCCATGGCGGCGGCCACGGCGAGCGTGGCGATCACGGCAGCCACGGCTACGGCGGCCATGGCTGGGGCC GTCAGGGCGTGCAACGCGGCGGCGGTTGGAATGATGCGCGTGACGGCGCGCCGCTTCGAGGCGAAGCGGGCGCGCCCGCG CAGCACGCCGCATGCGCGAAATGCGGCGCGATCAATGGTGCGGAGGCGAAGTTCTGCGCGCAGTGCGGCGCATCGCAGAC GCCGCCCGTTTGTGGCGCATGCCGTGCGCCGCTCGCCGCTTCGGCGCGTTTCTGTCCGCAGTGCGGGACGGCCGTCTCGG CGCAGCGCGGATGA
Upstream 100 bases:
>100_bases CACGATGTGGATGGCGGTGTTCGCCGACGCGGGCGCGAGCCTCATCGTCGTCGGCAACGGCTTGCGGCTGTTGCGCCGCG GCCAATGAACGGAGGCGGCG
Downstream 100 bases:
>100_bases CATGCGGCGCGCGGCCCGAATCGCCGGCGGCGCGCGGATGCGGCGTGCCGCTTATGCGGCTTCGCACACGTCGATCGCGC CGCCGTCCGCGATCGCCTGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MDWFKWLAGGRHRGYGGRRGHHGGEAGGGHGHGGGHGERGDHGSHGYGGHGWGRQGVQRGGGWNDARDGAPLRGEAGAPA QHAACAKCGAINGAEAKFCAQCGASQTPPVCGACRAPLAASARFCPQCGTAVSAQRG
Sequences:
>Translated_137_residues MDWFKWLAGGRHRGYGGRRGHHGGEAGGGHGHGGGHGERGDHGSHGYGGHGWGRQGVQRGGGWNDARDGAPLRGEAGAPA QHAACAKCGAINGAEAKFCAQCGASQTPPVCGACRAPLAASARFCPQCGTAVSAQRG >Mature_137_residues MDWFKWLAGGRHRGYGGRRGHHGGEAGGGHGHGGGHGERGDHGSHGYGGHGWGRQGVQRGGGWNDARDGAPLRGEAGAPA QHAACAKCGAINGAEAKFCAQCGASQTPPVCGACRAPLAASARFCPQCGTAVSAQRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13720; Mature: 13720
Theoretical pI: Translated: 9.01; Mature: 9.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
5.8 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 6.6 %Cys+Met (Translated Protein) 5.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 6.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDWFKWLAGGRHRGYGGRRGHHGGEAGGGHGHGGGHGERGDHGSHGYGGHGWGRQGVQRG CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC GGWNDARDGAPLRGEAGAPAQHAACAKCGAINGAEAKFCAQCGASQTPPVCGACRAPLAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHCCCHHH SARFCPQCGTAVSAQRG CCCCCCCCCCCCCCCCC >Mature Secondary Structure MDWFKWLAGGRHRGYGGRRGHHGGEAGGGHGHGGGHGERGDHGSHGYGGHGWGRQGVQRG CCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCC GGWNDARDGAPLRGEAGAPAQHAACAKCGAINGAEAKFCAQCGASQTPPVCGACRAPLAA CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCCCCHHCCCHHH SARFCPQCGTAVSAQRG CCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA