Click here to switch to the map view.

The map label for this gene is motB [H]

Identifier: 126452767

GI number: 126452767

Start: 3846047

End: 3847069

Strand: Reverse

Name: motB [H]

Synonym: BURPS1106A_3938

Alternate gene names: 126452767

Gene position: 3847069-3846047 (Counterclockwise)

Preceding gene: 126451764

Following gene: 126454141

Centisome position: 96.46

GC content: 67.55

Gene sequence:

>1023_bases
ATGAGCAAGGGCAAGGATCAGGCGATCATCGTCAAGCGGGTGAACCAGCAGAAGAAGGGGCACCACGGCGGCGCATGGAA
GCTCGCGTATGCGGACTTCATGACCGCGATGATGGCGTTCTTCCTGTTGATGTGGCTGCTGTCCGCCGTGACGCCCGTGC
AGTTGAAGGGGATCGCCGAGTACTTCAACACGCCGCTGAAGGCAGCGATCTTCGGCAGCGGCGATCGCAGCGCCGACGAT
GCGAGCATCATCAAGGGCGGCGGCCGCGACATTTCGAGCCTCGATGCCGGCACGACCCGCCGCACCGACGGCTCGACGCA
CCTGGCCGAGCGCGTCGCGAAGAAGAGCGAGGACGACGCGCTCGCGCAGGCGCAGGGCTCGCTCGAGCGCCGCGAGCAGG
TGCGGCTGCACGATCTGCAGGTGAAGCTGATGGCGGCCATCGAGGCGAATCCGACGCTGCGCCAGTTCAAGCAGCAGATC
CGCATCGATTCGACGCTGATGGGGCTGCGCATCGAAATCGTCGATACGCAGAAACGGCCGATGTTCGCGATGTCGAGCGA
CGCCGTCGAGCCGTACATGCGCGACATCCTGCGCGAGATCGGCAAGACGCTCAACGACGTGCCGAACCGCATCATCGTCC
AGGGCCACACCGACGCCGTGCCGTATGCGGGCGGCGAGAAGGGCTACAGCAACTGGGAGCTGTCCGCCGACCGGGCGAAC
GCGTCGCGCCGCGAGCTGATCGCGGGCGGCATGGACGAGGCGAAGGTGCTGCGCGTGCTCGGCCTCGCGTCGACGCAGAA
CCTGAACAAGGCGGACCCGCTCGATCCGGAGAACCGCCGGATCAGCATCATCGTGCTGAACCGCAAGTCCGAGCTCGCGC
TGATGCGCGACGACGCGACGACGACGACGCTGTCGTCCGACGCGGCCGGCTCGGCGCGGCTCGCGCAACAGATCACGCCG
CCCGGTGCGGCCGCGATGCCCGCGTTGCCGGGCGCGTCGGGCCTCGCCGTGCAGAAACCCTGA

Upstream 100 bases:

>100_bases
TTCGGCCGCAAGGTGCTGTTCTCGACCGAGCGTCCGTCGTTCGCCGAGCTCGAGGAGCACGTGCGCCGCGTGAAGGCGAA
GTGAGCGCGAGGGCACGGAC

Downstream 100 bases:

>100_bases
CGTATTCGAGACACGCATTCGAGACACGACATGATCCGAACCATTCTCGCCATCGACGACTCCGCCACGATGCGCACGCT
GCTCAGCGCGACGCTAGGCG

Product: flagellar motor protein MotB

Products: NA

Alternate protein names: Chemotaxis protein MotB [H]

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MSKGKDQAIIVKRVNQQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEYFNTPLKAAIFGSGDRSADD
ASIIKGGGRDISSLDAGTTRRTDGSTHLAERVAKKSEDDALAQAQGSLERREQVRLHDLQVKLMAAIEANPTLRQFKQQI
RIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRAN
ASRRELIAGGMDEAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRKSELALMRDDATTTTLSSDAAGSARLAQQITP
PGAAAMPALPGASGLAVQKP

Sequences:

>Translated_340_residues
MSKGKDQAIIVKRVNQQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEYFNTPLKAAIFGSGDRSADD
ASIIKGGGRDISSLDAGTTRRTDGSTHLAERVAKKSEDDALAQAQGSLERREQVRLHDLQVKLMAAIEANPTLRQFKQQI
RIDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRAN
ASRRELIAGGMDEAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRKSELALMRDDATTTTLSSDAAGSARLAQQITP
PGAAAMPALPGASGLAVQKP
>Mature_339_residues
SKGKDQAIIVKRVNQQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAEYFNTPLKAAIFGSGDRSADDA
SIIKGGGRDISSLDAGTTRRTDGSTHLAERVAKKSEDDALAQAQGSLERREQVRLHDLQVKLMAAIEANPTLRQFKQQIR
IDSTLMGLRIEIVDTQKRPMFAMSSDAVEPYMRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRANA
SRRELIAGGMDEAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRKSELALMRDDATTTTLSSDAAGSARLAQQITPP
GAAAMPALPGASGLAVQKP

Specific function: MotA and MotB comprise the stator element of the flagellar motor complex. Required for the rotation of the flagellar motor. Might be a linker that fastens the torque- generating machinery to the cell wall [H]

COG id: COG1360

COG function: function code N; Flagellar motor protein

Gene ontology:

Cell location: Cell inner membrane; Single- pass type II membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1788198, Length=331, Percent_Identity=47.4320241691843, Blast_Score=283, Evalue=1e-77,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA [H]

EC number: NA

Molecular weight: Translated: 36905; Mature: 36774

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKGKDQAIIVKRVNQQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAE
CCCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
YFNTPLKAAIFGSGDRSADDASIIKGGGRDISSLDAGTTRRTDGSTHLAERVAKKSEDDA
HHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH
LAQAQGSLERREQVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRP
HHHHHHHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCC
MFAMSSDAVEPYMRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRAN
EEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHCC
ASRRELIAGGMDEAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRKSELALMRDDAT
CHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCC
TTTLSSDAAGSARLAQQITPPGAAAMPALPGASGLAVQKP
EEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SKGKDQAIIVKRVNQQKKGHHGGAWKLAYADFMTAMMAFFLLMWLLSAVTPVQLKGIAE
CCCCCCCHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
YFNTPLKAAIFGSGDRSADDASIIKGGGRDISSLDAGTTRRTDGSTHLAERVAKKSEDDA
HHCCCCEEEEECCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCHHH
LAQAQGSLERREQVRLHDLQVKLMAAIEANPTLRQFKQQIRIDSTLMGLRIEIVDTQKRP
HHHHHHHHHHHHHHHHHHHHEEEEHHHCCCHHHHHHHHHHHHCCEEEEEEEEEEECCCCC
MFAMSSDAVEPYMRDILREIGKTLNDVPNRIIVQGHTDAVPYAGGEKGYSNWELSADRAN
EEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCCEEECHHCC
ASRRELIAGGMDEAKVLRVLGLASTQNLNKADPLDPENRRISIIVLNRKSELALMRDDAT
CHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEEEECCCCEEEEECCCC
TTTLSSDAAGSARLAQQITPPGAAAMPALPGASGLAVQKP
EEEECCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9139919; 11677609; 10586519 [H]