| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is pckG
Identifier: 126452752
GI number: 126452752
Start: 1431841
End: 1433706
Strand: Direct
Name: pckG
Synonym: BURPS1106A_1475
Alternate gene names: 126452752
Gene position: 1431841-1433706 (Clockwise)
Preceding gene: 126451526
Following gene: 126453413
Centisome position: 35.9
GC content: 68.81
Gene sequence:
>1866_bases ATGACCCGAAGCAACGTGGTCGCGGCGACGCGCACCGTTCCGATCGACGTTCCCGAATACGTGAAGCACCGCGGCCTGAT CGACTGGGTCGCGCGTATCGCGGAGTTGACCGAGCCGGATCGCGTTGTCTGGTGCGACGGTTCGCAGCAGGAGTACGACC GCCTCTGCGACGCGATGGTCGAACAGCGCACGATGGTGCGCCTCAATCCGGCGAAGCGGCCGAACTCGTTTCTCGCGCTG TCCGATCCGTCCGACGTCGCGCGTGTCGAAGACCGCACGTTCATCTGCAGCGAGCATCGCGACGACGCGGGCCCGACCAA TCACTGGGTCGCGCCCGCCGAAATGCGCGCGACGCTCAACGGCCTGTTTCGCGGCGCGATGCGCGGCCGCACGCTGTACG TCGTGCCGTTCTCGATGGGCCCGCTCGGCTCGCCGATCGCGCACATCGGCGTCGAGCTCTCGGATAGCCCCTACGTCGTC GTCAACATGCGGATCATGACGCGCATGGGGCGCGCGGTGCTCGACGCGCTCGGCGAGCGCGGCGAGTACGTGCCGTGCGT GCACAGCGTCGGGCGCCCGCTCGCGGCGGGCGAGCAGGATGTGCCGTGGCCGTGCAATCCGACCAAGTACATCGTGCATT TTCCCGAGTCGCGTGAGATCTGGAGCTTCGGCTCGGGCTACGGCGGCAACGCGCTCCTCGGCAAGAAGTGCTTCGCGCTG CGGATCGCGTCGACGATGGGGCGCGACGAAGGCTGGCTCGCCGAGCACATGCTGATCCTCGGCGTGACCTCGCCCGAGGG CCGCAAGTATCACATCGCCGCGGCGTTTCCTTCCGCGTGCGGCAAGACCAACTTCGCGATGCTGATCCCGCCGAAGGGCT TCGAGGGCTGGCGCGTGACGACGATCGGCGACGACATCGCGTGGCTCAAGCCGGGCCGCGACGGGCGGCTGTATGCGATC AACCCGGAGGCGGGCTATTTTGGCGTCGCGCCGGGCACGGGCGAGAAGACCAATCCGAACGCGCTCGCGACGCTCAGGGA GAACGTGATCTTCACGAACGTCGCGCTCACGGAGGACGGCGACGTCTGGTGGGAAGGCCTCACCGACACGCCGCCCGCGC GGCTCACCGATTGGCAGGGCAACGCATGGACGCCCGAGATCGGCCGCGAGACGGGCCGCAAGGCCGCGCATCCGAACTCG CGCTTCACGGCGCCCGCGTCGCAGTGCCCGTCGATCGACGACGATTGGGAGAACCCGGGCGGCGTGCCGATCGACGCGTT CATCTTCGGCGGCCGCCGCTCGACGACGGTGCCGCTCGTCACCGAGGCGCGCGACTGGATCGAAGGCGTGTACATGGCGG CGACGATGGGCTCGGAGACGACGGCCGCGGCGGCGGGGCAGCAGGGCATCGTGCGGCGCGATCCGTTCGCGATGCTGCCG TTCTGCGGCTACAACATGAGCGACTATTTCTCGCACTGGCTCGCGCTCGGCGAGAAGCTCGCGGCGGCGGGCGCGACGTT GCCGAAGATCTACTGCGTGAACTGGTTCCGCAAGGACGCGGACGGCCGCTTCGCGTGGCCCGGCTTCGGCGAGAACATGC GCGTGCTGAAGTGGATGCTCGACCGGATCGACGGCCGCGGCGAGGGCGTCGAGCACGCGTTCGGCGTGACGCCGCGCTAC GAGGATCTGCATTGGGCGGGGCTCGCGTTCTCGCCCGCGCAGTATGCGCAGGTCACGTCGATGAATCCGGACGAATGGCG CGCCGAGCTCGCGCTGCACGCGGAGCTGTTCGACAAGCTGAGCGCGCGGCTGCCGGATGCGCTCGCCGAAACGAAGGCGA GGATCGAGAAAAGGCTCGGCGGCTGA
Upstream 100 bases:
>100_bases GCGTCGCCCCCAGCCATCGCGTAGCGCCGCTACGCCCGCCGCGCGCGTCATCGCGCGGCGCACGCACGCAATTCTGGTTC TACAACACGGAGACACTCTC
Downstream 100 bases:
>100_bases GCAACGCGGCAAATCGCGAGCACGCCGCACGGCGGCGACGCGGCCGGGACGGCGCGCGCCGGAGCCGCGCGCGAGATATG CCGCTTGCGCCGCCGTGCGC
Product: phosphoenolpyruvate carboxykinase
Products: NA
Alternate protein names: PEP carboxykinase; PEPCK; Phosphoenolpyruvate carboxylase
Number of amino acids: Translated: 621; Mature: 620
Protein sequence:
>621_residues MTRSNVVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMVEQRTMVRLNPAKRPNSFLAL SDPSDVARVEDRTFICSEHRDDAGPTNHWVAPAEMRATLNGLFRGAMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVV VNMRIMTRMGRAVLDALGERGEYVPCVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFAL RIASTMGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVTTIGDDIAWLKPGRDGRLYAI NPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTEDGDVWWEGLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNS RFTAPASQCPSIDDDWENPGGVPIDAFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLP FCGYNMSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWMLDRIDGRGEGVEHAFGVTPRY EDLHWAGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKLSARLPDALAETKARIEKRLGG
Sequences:
>Translated_621_residues MTRSNVVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMVEQRTMVRLNPAKRPNSFLAL SDPSDVARVEDRTFICSEHRDDAGPTNHWVAPAEMRATLNGLFRGAMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVV VNMRIMTRMGRAVLDALGERGEYVPCVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFAL RIASTMGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVTTIGDDIAWLKPGRDGRLYAI NPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTEDGDVWWEGLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNS RFTAPASQCPSIDDDWENPGGVPIDAFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLP FCGYNMSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWMLDRIDGRGEGVEHAFGVTPRY EDLHWAGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKLSARLPDALAETKARIEKRLGG >Mature_620_residues TRSNVVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMVEQRTMVRLNPAKRPNSFLALS DPSDVARVEDRTFICSEHRDDAGPTNHWVAPAEMRATLNGLFRGAMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVVV NMRIMTRMGRAVLDALGERGEYVPCVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFALR IASTMGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVTTIGDDIAWLKPGRDGRLYAIN PEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTEDGDVWWEGLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNSR FTAPASQCPSIDDDWENPGGVPIDAFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLPF CGYNMSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWMLDRIDGRGEGVEHAFGVTPRYE DLHWAGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKLSARLPDALAETKARIEKRLGG
Specific function: Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle
COG id: COG1274
COG function: function code C; Phosphoenolpyruvate carboxykinase (GTP)
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphoenolpyruvate carboxykinase [GTP] family
Homologues:
Organism=Homo sapiens, GI187281517, Length=606, Percent_Identity=50.8250825082508, Blast_Score=593, Evalue=1e-169, Organism=Homo sapiens, GI66346721, Length=610, Percent_Identity=50.327868852459, Blast_Score=573, Evalue=1e-163, Organism=Homo sapiens, GI66346723, Length=387, Percent_Identity=52.9715762273902, Blast_Score=391, Evalue=1e-108, Organism=Caenorhabditis elegans, GI71989645, Length=607, Percent_Identity=48.9291598023064, Blast_Score=563, Evalue=1e-161, Organism=Caenorhabditis elegans, GI71989658, Length=607, Percent_Identity=48.9291598023064, Blast_Score=562, Evalue=1e-160, Organism=Caenorhabditis elegans, GI17555492, Length=617, Percent_Identity=49.2706645056726, Blast_Score=558, Evalue=1e-159, Organism=Caenorhabditis elegans, GI71989653, Length=597, Percent_Identity=49.0787269681742, Blast_Score=555, Evalue=1e-158, Organism=Caenorhabditis elegans, GI32564411, Length=558, Percent_Identity=52.5089605734767, Blast_Score=548, Evalue=1e-156, Organism=Caenorhabditis elegans, GI32564407, Length=529, Percent_Identity=51.7958412098299, Blast_Score=509, Evalue=1e-144, Organism=Caenorhabditis elegans, GI71989649, Length=482, Percent_Identity=53.1120331950208, Blast_Score=497, Evalue=1e-141, Organism=Caenorhabditis elegans, GI32564409, Length=375, Percent_Identity=49.0666666666667, Blast_Score=324, Evalue=8e-89, Organism=Caenorhabditis elegans, GI17540956, Length=532, Percent_Identity=24.6240601503759, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24655085, Length=597, Percent_Identity=49.5812395309883, Blast_Score=582, Evalue=1e-166, Organism=Drosophila melanogaster, GI24655082, Length=607, Percent_Identity=48.1054365733114, Blast_Score=559, Evalue=1e-159, Organism=Drosophila melanogaster, GI161077226, Length=576, Percent_Identity=48.7847222222222, Blast_Score=537, Evalue=1e-153, Organism=Drosophila melanogaster, GI24655088, Length=509, Percent_Identity=50.8840864440079, Blast_Score=516, Evalue=1e-146,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PCKG_BURMA (Q62FI7)
Other databases:
- EMBL: CP000010 - RefSeq: YP_104540.1 - ProteinModelPortal: Q62FI7 - SMR: Q62FI7 - GeneID: 3089419 - GenomeReviews: CP000010_GR - KEGG: bma:BMA3042 - TIGR: BMA3042 - HOGENOM: HBG484437 - OMA: CGYHMGD - ProtClustDB: PRK04210 - BioCyc: BMAL243160:BMA_3042-MONOMER - BRENDA: 4.1.1.32 - GO: GO:0005737 - GO: GO:0006094 - HAMAP: MF_00452 - InterPro: IPR018091 - InterPro: IPR013035 - InterPro: IPR008209 - InterPro: IPR008210 - Gene3D: G3DSA:3.90.228.20 - Gene3D: G3DSA:3.40.449.10 - PANTHER: PTHR11561 - PIRSF: PIRSF001348
Pfam domain/function: PF00821 PEPCK; SSF68923 PEP_carboxykinase_N
EC number: =4.1.1.32
Molecular weight: Translated: 68534; Mature: 68403
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00505 PEPCK_GTP
Important sites: ACT_SITE 280-280 BINDING 88-88 BINDING 229-229 BINDING 236-236 BINDING 278-278 BINDING 401-401 BINDING 432-432
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRSNVVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMV CCCCCEEEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH EQRTMVRLNPAKRPNSFLALSDPSDVARVEDRTFICSEHRDDAGPTNHWVAPAEMRATLN HCCCEEEECCCCCCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH GLFRGAMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRIMTRMGRAVLDALGER HHHHHHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCC GEYVPCVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFAL CCEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCHHCCHHHHH RIASTMGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVT HHHHHCCCCCCHHEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEE TIGDDIAWLKPGRDGRLYAINPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTEDG EECCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEECCC DVWWEGLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNSRFTAPASQCPSIDDDWENPG CEEECCCCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC GVPIDAFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLP CCEEEEEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCHHHHHCCCCCCEECCCCEECC FCGYNMSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWML CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCEECCCCCCCHHHHHHHH DRIDGRGEGVEHAFGVTPRYEDLHWAGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKL HHCCCCCCCCHHHCCCCCCCCCCEEECEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHH SARLPDALAETKARIEKRLGG HHHCCHHHHHHHHHHHHHHCC >Mature Secondary Structure TRSNVVAATRTVPIDVPEYVKHRGLIDWVARIAELTEPDRVVWCDGSQQEYDRLCDAMV CCCCEEEEEEEECCCCHHHHHHCCHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHHHHH EQRTMVRLNPAKRPNSFLALSDPSDVARVEDRTFICSEHRDDAGPTNHWVAPAEMRATLN HCCCEEEECCCCCCCCEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHH GLFRGAMRGRTLYVVPFSMGPLGSPIAHIGVELSDSPYVVVNMRIMTRMGRAVLDALGER HHHHHHHCCCEEEEEEECCCCCCCCHHHEEEEECCCCEEEEEEHHHHHHHHHHHHHHHCC GEYVPCVHSVGRPLAAGEQDVPWPCNPTKYIVHFPESREIWSFGSGYGGNALLGKKCFAL CCEEHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEECCCCCCCCCCHHCCHHHHH RIASTMGRDEGWLAEHMLILGVTSPEGRKYHIAAAFPSACGKTNFAMLIPPKGFEGWRVT HHHHHCCCCCCHHEEEEEEEEECCCCCCEEEEEEECCCCCCCCCEEEEECCCCCCCCEEE TIGDDIAWLKPGRDGRLYAINPEAGYFGVAPGTGEKTNPNALATLRENVIFTNVALTEDG EECCCEEEECCCCCCEEEEECCCCCEEECCCCCCCCCCCHHHHHHHCCEEEEEEEEECCC DVWWEGLTDTPPARLTDWQGNAWTPEIGRETGRKAAHPNSRFTAPASQCPSIDDDWENPG CEEECCCCCCCCCCEECCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC GVPIDAFIFGGRRSTTVPLVTEARDWIEGVYMAATMGSETTAAAAGQQGIVRRDPFAMLP CCEEEEEEECCCCCCEEEEEHHHHHHHHHEEEEEECCCCHHHHHCCCCCCEECCCCEECC FCGYNMSDYFSHWLALGEKLAAAGATLPKIYCVNWFRKDADGRFAWPGFGENMRVLKWML CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHCCCCCCEECCCCCCCHHHHHHHH DRIDGRGEGVEHAFGVTPRYEDLHWAGLAFSPAQYAQVTSMNPDEWRAELALHAELFDKL HHCCCCCCCCHHHCCCCCCCCCCEEECEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHH SARLPDALAETKARIEKRLGG HHHCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA