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The map label for this gene is lrp [H]

Identifier: 126452736

GI number: 126452736

Start: 884242

End: 884745

Strand: Direct

Name: lrp [H]

Synonym: BURPS1106A_0899

Alternate gene names: 126452736

Gene position: 884242-884745 (Clockwise)

Preceding gene: 126454908

Following gene: 126454402

Centisome position: 22.17

GC content: 65.08

Gene sequence:

>504_bases
ATGCATGCGATCACGCTGGATGCAACCGATTGCCGTATTCTCGCGGTCCTTCAGGAAGAAGGCCGGATCAGCAACCTCGA
TCTGGCCGAGCGCATTTCGCTGTCGCCGTCCGCGTGCCTGCGGCGGATGCGGCTGCTCGAGGAGCAAGGGGTGATCGAAC
GCTATCGGGCGTGCCTGAGCCGCGAGAAGCTCGGGTTCGAGCTCGAGGCGTTCGTGCAGGTGTCGATGCGCAACGATCAG
ACGCAGTGGCACGAGCGTTTCGCGCAGGCGGTGCGCGAATGGCCGGAGGTGGTGGGCGCGTTTGTCGTGACGGGCGAGAC
GCACTACCTGCTGCGCGTGCTCGCGCACAACCTGAAGCACTACTCCGATTTCGTGCTGAATCAGCTGTACAAGACGCCCG
GCGTGCTCGACATTCGCTCGAACATCGTGCTGCAGACGCTGAAGGACGAGGCGGGGCCGCCCGTCGCGCTCGCGCGCACG
GGCCCGGCGATCAAAGCCGTGTGA

Upstream 100 bases:

>100_bases
CATGATAGGCAAAGCCGCGAAGCAGGTGCTTGCAAAATAAGCATGGACAATCCACCAATATGGCAGATAATTCGAAATAG
ACCTAAAACGGAGACCAAAA

Downstream 100 bases:

>100_bases
GGCCGTGAAAGCCGCCGCTCTGGAACACGAGCGGCGCGAGCGCGGCCGCGTCGGGGTGCACGCCGCAGCGCTCGACCTCG
CCGACGAAGATCACGTGGTC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MHAITLDATDCRILAVLQEEGRISNLDLAERISLSPSACLRRMRLLEEQGVIERYRACLSREKLGFELEAFVQVSMRNDQ
TQWHERFAQAVREWPEVVGAFVVTGETHYLLRVLAHNLKHYSDFVLNQLYKTPGVLDIRSNIVLQTLKDEAGPPVALART
GPAIKAV

Sequences:

>Translated_167_residues
MHAITLDATDCRILAVLQEEGRISNLDLAERISLSPSACLRRMRLLEEQGVIERYRACLSREKLGFELEAFVQVSMRNDQ
TQWHERFAQAVREWPEVVGAFVVTGETHYLLRVLAHNLKHYSDFVLNQLYKTPGVLDIRSNIVLQTLKDEAGPPVALART
GPAIKAV
>Mature_167_residues
MHAITLDATDCRILAVLQEEGRISNLDLAERISLSPSACLRRMRLLEEQGVIERYRACLSREKLGFELEAFVQVSMRNDQ
TQWHERFAQAVREWPEVVGAFVVTGETHYLLRVLAHNLKHYSDFVLNQLYKTPGVLDIRSNIVLQTLKDEAGPPVALART
GPAIKAV

Specific function: Mediates a global response to leucine. Exogenous leucine affects the expression of a number of different operons; lrp mediates this effect for at least some of these operons [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87081742, Length=150, Percent_Identity=33.3333333333333, Blast_Score=100, Evalue=4e-23,
Organism=Escherichia coli, GI1787116, Length=143, Percent_Identity=36.3636363636364, Blast_Score=98, Evalue=3e-22,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg [H]

EC number: NA

Molecular weight: Translated: 18924; Mature: 18924

Theoretical pI: Translated: 7.04; Mature: 7.04

Prosite motif: PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHAITLDATDCRILAVLQEEGRISNLDLAERISLSPSACLRRMRLLEEQGVIERYRACLS
CCEEEECCCCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
REKLGFELEAFVQVSMRNDQTQWHERFAQAVREWPEVVGAFVVTGETHYLLRVLAHNLKH
HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHH
YSDFVLNQLYKTPGVLDIRSNIVLQTLKDEAGPPVALARTGPAIKAV
HHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCC
>Mature Secondary Structure
MHAITLDATDCRILAVLQEEGRISNLDLAERISLSPSACLRRMRLLEEQGVIERYRACLS
CCEEEECCCCCEEEEEECCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHH
REKLGFELEAFVQVSMRNDQTQWHERFAQAVREWPEVVGAFVVTGETHYLLRVLAHNLKH
HHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHH
YSDFVLNQLYKTPGVLDIRSNIVLQTLKDEAGPPVALARTGPAIKAV
HHHHHHHHHHHCCCEEEHHHHHHHHHHHHCCCCCEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11157937; 11481430 [H]