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The map label for this gene is yceJ [H]

Identifier: 126452719

GI number: 126452719

Start: 3289392

End: 3289955

Strand: Reverse

Name: yceJ [H]

Synonym: BURPS1106A_3370

Alternate gene names: 126452719

Gene position: 3289955-3289392 (Counterclockwise)

Preceding gene: 126452100

Following gene: 126451872

Centisome position: 82.49

GC content: 66.67

Gene sequence:

>564_bases
ATGGCATCGTTTTCGTCTTCGGCTTCGCCTGCGGCAGCTTACACGCGTACCGCGATCGCGCTCCACTGGCTGATCGCGCT
GCTCATCGTGTGCGGCTTCGCGCTCGGCTGGGTGATGACGAGCATCCCGGGCTTCACGCCCGCGAAGCTCAAATACTATT
CGTGGCACAAGTGGATCGGCGTGACGGTGTTCGCGATCGCGATCGTGCGCGTGCTCTGGCGCGCGACCCACGTGCCGCCG
CCGATGCCGGCCGGCATGCCCGCGTGGCAGCGCGCGGGCGCGCACGCGGTGCACGGGCTGCTTTACGTGCTGATGCTCGT
GATTCCGGTGACGGGCTACCTGTATAGCTCGGCCGCGAACATTCCGGTCGTCTATCTCGGGCTCGTGCCGTTGCCGCGCC
TGATCGACCCCGATCCGGCGCTGAAGGAAACGCTGAAGACGGCGCACGTGCTGCTCAACTACGGCCTGCTCGCGCTCGTC
GCCGCGCACGTCGCGGCGGCCGTCAAGCACCAGTGGTTCGACCGCGACGGCGTGCTGTCGCGGATGCTTCCCTTCCTCAA
ATAA

Upstream 100 bases:

>100_bases
CTGCCATTCGTCGGCGGTTGCGGTAGCATGGCGGCCGTGACATGCGTCGGACGGCAAGCACGGCAGCGCCGGCGCGGCTT
TTCGCTCAACTGAGGAATTC

Downstream 100 bases:

>100_bases
CAAGGACCGTTATGAAAGTCTCGTTCTACCGCTACATGCTCGCGGCGTTCGCCGCCGCCTCGGTCGCCGTGTCGGGCGCC
GCGCTCGCGCAGGTCGATCT

Product: putative [Ni] hydrogenase, b-type cytochrome subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MASFSSSASPAAAYTRTAIALHWLIALLIVCGFALGWVMTSIPGFTPAKLKYYSWHKWIGVTVFAIAIVRVLWRATHVPP
PMPAGMPAWQRAGAHAVHGLLYVLMLVIPVTGYLYSSAANIPVVYLGLVPLPRLIDPDPALKETLKTAHVLLNYGLLALV
AAHVAAAVKHQWFDRDGVLSRMLPFLK

Sequences:

>Translated_187_residues
MASFSSSASPAAAYTRTAIALHWLIALLIVCGFALGWVMTSIPGFTPAKLKYYSWHKWIGVTVFAIAIVRVLWRATHVPP
PMPAGMPAWQRAGAHAVHGLLYVLMLVIPVTGYLYSSAANIPVVYLGLVPLPRLIDPDPALKETLKTAHVLLNYGLLALV
AAHVAAAVKHQWFDRDGVLSRMLPFLK
>Mature_186_residues
ASFSSSASPAAAYTRTAIALHWLIALLIVCGFALGWVMTSIPGFTPAKLKYYSWHKWIGVTVFAIAIVRVLWRATHVPPP
MPAGMPAWQRAGAHAVHGLLYVLMLVIPVTGYLYSSAANIPVVYLGLVPLPRLIDPDPALKETLKTAHVLLNYGLLALVA
AHVAAAVKHQWFDRDGVLSRMLPFLK

Specific function: Unknown

COG id: COG3038

COG function: function code C; Cytochrome B561

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome b561 family [H]

Homologues:

Organism=Escherichia coli, GI1787296, Length=171, Percent_Identity=32.7485380116959, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI87082013, Length=175, Percent_Identity=26.8571428571429, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005797
- InterPro:   IPR016174 [H]

Pfam domain/function: PF00033 Cytochrom_B_N [H]

EC number: NA

Molecular weight: Translated: 20375; Mature: 20243

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASFSSSASPAAAYTRTAIALHWLIALLIVCGFALGWVMTSIPGFTPAKLKYYSWHKWIG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VTVFAIAIVRVLWRATHVPPPMPAGMPAWQRAGAHAVHGLLYVLMLVIPVTGYLYSSAAN
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPVVYLGLVPLPRLIDPDPALKETLKTAHVLLNYGLLALVAAHVAAAVKHQWFDRDGVLS
CCEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RMLPFLK
HHHHHCC
>Mature Secondary Structure 
ASFSSSASPAAAYTRTAIALHWLIALLIVCGFALGWVMTSIPGFTPAKLKYYSWHKWIG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
VTVFAIAIVRVLWRATHVPPPMPAGMPAWQRAGAHAVHGLLYVLMLVIPVTGYLYSSAAN
HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
IPVVYLGLVPLPRLIDPDPALKETLKTAHVLLNYGLLALVAAHVAAAVKHQWFDRDGVLS
CCEEEECHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
RMLPFLK
HHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503 [H]