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The map label for this gene is atpB [H]

Identifier: 126452691

GI number: 126452691

Start: 3954044

End: 3954913

Strand: Reverse

Name: atpB [H]

Synonym: BURPS1106A_4048

Alternate gene names: 126452691

Gene position: 3954913-3954044 (Counterclockwise)

Preceding gene: 126454038

Following gene: 126455198

Centisome position: 99.16

GC content: 61.38

Gene sequence:

>870_bases
TTGGGTGGCTTTAACGATATGGCAGCTAGCGAAGGCACGCGTGCTCCGGATCCGTCCGAGTACATTGCGCACCACTTGCA
GAATTTCTCCACCTCGCATCAGACGTCGATTTTCGATATTCACGTCTGGAATCTCGACACGCTGTTCTGGTCGATCGTGT
GTGGCCTGATCACCATCCTGCTGCTGCGTCTTGCCGCCCGCAAGGCGACGTCCGGCGTGCCGGGCCGCTTCCAGTGCGCG
GTCGAGATGCTCGTCGAGATGGTCGAAGACCAATCGAAGGCGATCGTCCACGGCAATCGCGCATTCATCGCGCCGCTCGC
GCTCACGGTGTTCGTGTGGGTCGCGCTGATGAACTCCCTCGATTTCCTTCCCGTCGACCTGCCGGGCCGCGTGATCGGCT
GGCTGGGCCTGTCGGGCATCATTTCCCATCACCGCATCGTTCCGACCGCCGATCTGAACGGCACGCTCGGCATCGCGCTC
GGCGTGTTCGTCCTGATGCTCTACTACAGCATCAAGATCAAGGGCGCGGGCGGCTTTGCTCACGAGTTGGTGTCGGCGCC
GTTCGGCTCGCACCCGCTGCTGTGGATCCCGAACCTCGCGCTCAACATCGTCGAATTCGTCGCCAAGACCGTGTCGCTCG
GCATGCGGCTGTTCGGCAACATGTACGCGGGTGAGTTGGTGTTCTTGCTGATCGCCCTCCTCGGCAGCATGTGGAGCTTC
GGCGGCGACGCAACGTTCCTCGGCTTCGTCGGTCACGTGATCGCGGGCAGCGTCTGGGCAATCTTCCACATCCTGATTGT
TCTGTTGCAGGCATTCATCTTCATGATGCTGACGCTGGTGTATCTCGGCCAGGCGCACGACGCGCACTAA

Upstream 100 bases:

>100_bases
CGGTAAAAAACAGCGGCGCGCGGGTTCGACTCGTACTCGCGCCGGCGCGTTCCCGCAACAAGCTGTTGCGGGAAATCGCG
CCAAAACGATTTTCGACAAT

Downstream 100 bases:

>100_bases
AGCGCTGCGGGCAAAAGATAGTTTCCGTTTTGGTTTTTTAAATCTCAGTTCCAAGTCTTTTCACAAAGGAGTGATCATGC
AAGCTTTCATCGCCAACATC

Product: F0F1 ATP synthase subunit A

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F0 sector subunit a; F-ATPase subunit 6 [H]

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MGGFNDMAASEGTRAPDPSEYIAHHLQNFSTSHQTSIFDIHVWNLDTLFWSIVCGLITILLLRLAARKATSGVPGRFQCA
VEMLVEMVEDQSKAIVHGNRAFIAPLALTVFVWVALMNSLDFLPVDLPGRVIGWLGLSGIISHHRIVPTADLNGTLGIAL
GVFVLMLYYSIKIKGAGGFAHELVSAPFGSHPLLWIPNLALNIVEFVAKTVSLGMRLFGNMYAGELVFLLIALLGSMWSF
GGDATFLGFVGHVIAGSVWAIFHILIVLLQAFIFMMLTLVYLGQAHDAH

Sequences:

>Translated_289_residues
MGGFNDMAASEGTRAPDPSEYIAHHLQNFSTSHQTSIFDIHVWNLDTLFWSIVCGLITILLLRLAARKATSGVPGRFQCA
VEMLVEMVEDQSKAIVHGNRAFIAPLALTVFVWVALMNSLDFLPVDLPGRVIGWLGLSGIISHHRIVPTADLNGTLGIAL
GVFVLMLYYSIKIKGAGGFAHELVSAPFGSHPLLWIPNLALNIVEFVAKTVSLGMRLFGNMYAGELVFLLIALLGSMWSF
GGDATFLGFVGHVIAGSVWAIFHILIVLLQAFIFMMLTLVYLGQAHDAH
>Mature_288_residues
GGFNDMAASEGTRAPDPSEYIAHHLQNFSTSHQTSIFDIHVWNLDTLFWSIVCGLITILLLRLAARKATSGVPGRFQCAV
EMLVEMVEDQSKAIVHGNRAFIAPLALTVFVWVALMNSLDFLPVDLPGRVIGWLGLSGIISHHRIVPTADLNGTLGIALG
VFVLMLYYSIKIKGAGGFAHELVSAPFGSHPLLWIPNLALNIVEFVAKTVSLGMRLFGNMYAGELVFLLIALLGSMWSFG
GDATFLGFVGHVIAGSVWAIFHILIVLLQAFIFMMLTLVYLGQAHDAH

Specific function: Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane [H]

COG id: COG0356

COG function: function code C; F0F1-type ATP synthase, subunit a

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase A chain family [H]

Homologues:

Organism=Escherichia coli, GI1790176, Length=281, Percent_Identity=49.1103202846975, Blast_Score=223, Evalue=1e-59,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000568
- InterPro:   IPR023011 [H]

Pfam domain/function: PF00119 ATP-synt_A [H]

EC number: 3.6.3.14

Molecular weight: Translated: 31444; Mature: 31312

Theoretical pI: Translated: 6.70; Mature: 6.70

Prosite motif: PS00449 ATPASE_A

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGFNDMAASEGTRAPDPSEYIAHHLQNFSTSHQTSIFDIHVWNLDTLFWSIVCGLITIL
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
LLRLAARKATSGVPGRFQCAVEMLVEMVEDQSKAIVHGNRAFIAPLALTVFVWVALMNSL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHCC
DFLPVDLPGRVIGWLGLSGIISHHRIVPTADLNGTLGIALGVFVLMLYYSIKIKGAGGFA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
HELVSAPFGSHPLLWIPNLALNIVEFVAKTVSLGMRLFGNMYAGELVFLLIALLGSMWSF
HHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGDATFLGFVGHVIAGSVWAIFHILIVLLQAFIFMMLTLVYLGQAHDAH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
GGFNDMAASEGTRAPDPSEYIAHHLQNFSTSHQTSIFDIHVWNLDTLFWSIVCGLITIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHH
LLRLAARKATSGVPGRFQCAVEMLVEMVEDQSKAIVHGNRAFIAPLALTVFVWVALMNSL
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHHCC
DFLPVDLPGRVIGWLGLSGIISHHRIVPTADLNGTLGIALGVFVLMLYYSIKIKGAGGFA
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHH
HELVSAPFGSHPLLWIPNLALNIVEFVAKTVSLGMRLFGNMYAGELVFLLIALLGSMWSF
HHHHHCCCCCCCCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
GGDATFLGFVGHVIAGSVWAIFHILIVLLQAFIFMMLTLVYLGQAHDAH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA