| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452626
Identifier: 126452626
GI number: 126452626
Start: 3444863
End: 3445423
Strand: Direct
Name: 126452626
Synonym: BURPS1106A_3541
Alternate gene names: NA
Gene position: 3444863-3445423 (Clockwise)
Preceding gene: 126451790
Following gene: 126454688
Centisome position: 86.37
GC content: 69.34
Gene sequence:
>561_bases ATGCCGGCGGACGGCGCGGCAGCGCGGGGGCGGCGGCGGGTCGACTGCGGATCGGCGCAGGGGGCGCGCATCGCCATCCG CGAGGTCGGCGACGGCCGCGCGAACTGCTCGGCCCGCGGTCCTTGGCACGCTCGGACAAGCGGCACATCGCAAAGCGGCG ACGGCGACCGAGCATGCCGGCCTTCATGCTGGACGCCGACTCGGGGTCGGAAGGCGCGCTTCGGCTTCGGCTTCGGCTTC GGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGGCTTCGG CTTCGGCTTCGGCTTCGGTCTTATCGGAAAAGTCAACGCGAGAGGCCCGGGAAGCTTCCATCGAGGCCCGCCGCAACGAC GACCGGCCGCCGCAAAAACGACCGATACCCGCGGCCGCCAAATAACATCGCGGTACAATCGGCACATCACTCCACCACCC GGTCGCCCGTCATGCGCCTTGCCCCGCCGCGGCGCCGACTTTTCCCATGAACCGACCGCCGAAGCAGCTATTTCGCCCTA A
Upstream 100 bases:
>100_bases TGAATTCAAACGTCGAATTTTAGCACGCGCACCAAGGCGCGCCGGTGTCGGCGGCAGCCGCCGCCGTGGGGCGTAGCCCG GCCGGGTGAGCGGCCGAGCA
Downstream 100 bases:
>100_bases CGACTGGTCGCGACCGCGCGCGGCCGCCGACGTCCTCCAGCGCACCGACGCGTTCGCCGCGCTGCGCGCGGGCGTCGAAC AGGTCGCGGCGCTGAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MPADGAAARGRRRVDCGSAQGARIAIREVGDGRANCSARGPWHARTSGTSQSGDGDRACRPSCWTPTRGRKARFGFGFGF GFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGLIGKVNARGPGSFHRGPPQRRPAAAKTTDTRGRQITSRYNRHITPPP GRPSCALPRRGADFSHEPTAEAAISP
Sequences:
>Translated_186_residues MPADGAAARGRRRVDCGSAQGARIAIREVGDGRANCSARGPWHARTSGTSQSGDGDRACRPSCWTPTRGRKARFGFGFGF GFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGLIGKVNARGPGSFHRGPPQRRPAAAKTTDTRGRQITSRYNRHITPPP GRPSCALPRRGADFSHEPTAEAAISP >Mature_185_residues PADGAAARGRRRVDCGSAQGARIAIREVGDGRANCSARGPWHARTSGTSQSGDGDRACRPSCWTPTRGRKARFGFGFGFG FGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGLIGKVNARGPGSFHRGPPQRRPAAAKTTDTRGRQITSRYNRHITPPPG RPSCALPRRGADFSHEPTAEAAISP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19613; Mature: 19482
Theoretical pI: Translated: 12.18; Mature: 12.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPADGAAARGRRRVDCGSAQGARIAIREVGDGRANCSARGPWHARTSGTSQSGDGDRACR CCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSCWTPTRGRKARFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGLIGKVNA CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCC RGPGSFHRGPPQRRPAAAKTTDTRGRQITSRYNRHITPPPGRPSCALPRRGADFSHEPTA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC EAAISP CCCCCC >Mature Secondary Structure PADGAAARGRRRVDCGSAQGARIAIREVGDGRANCSARGPWHARTSGTSQSGDGDRACR CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PSCWTPTRGRKARFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGFGLIGKVNA CCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEECCC RGPGSFHRGPPQRRPAAAKTTDTRGRQITSRYNRHITPPPGRPSCALPRRGADFSHEPTA CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC EAAISP CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA