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The map label for this gene is 126452608

Identifier: 126452608

GI number: 126452608

Start: 82931

End: 83092

Strand: Direct

Name: 126452608

Synonym: BURPS1106A_0090

Alternate gene names: NA

Gene position: 82931-83092 (Clockwise)

Preceding gene: 126451486

Following gene: 126452362

Centisome position: 2.08

GC content: 61.11

Gene sequence:

>162_bases
GTGTTGGCGATTCGGGAGAAGGTCAACATCTCCGAGCGCCGCGCCTGCCGGCTTGTCGGGCTTTCTCGCAGCGTGCTGCA
TTACGACGCGAAGCCGGACCACGAGAATGAGGTGCTCGCGGCGCTGACCTGCCCTGGAATTTTCGGACCAGTTGAAACTT
GA

Upstream 100 bases:

>100_bases
CCCGACTGAAGAAACTGCTGGCCGAAGCAATGCTCGATATGGAAGCGTTGAAGGTTGTCGTCAAGGGAAAGCCCTGAGCC
CGCAAGCCAAACGCGAAGCA

Downstream 100 bases:

>100_bases
GAGAATGGCTTCCAACGGAGAAAAGGAAGTCATGAAGAAGAGCCGGTTTACCGAAGAACAGATGGTCACCATCCTGCGCG
AGGCGGACAAGGCGCCGGTC

Product: A, transposase OrfB

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 53; Mature: 53

Protein sequence:

>53_residues
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAALTCPGIFGPVET

Sequences:

>Translated_53_residues
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAALTCPGIFGPVET
>Mature_53_residues
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAALTCPGIFGPVET

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 5877; Mature: 5877

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
3.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAALTCPGIFGPVET
CCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MLAIREKVNISERRACRLVGLSRSVLHYDAKPDHENEVLAALTCPGIFGPVET
CCCCCCCCCCCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1718819 [H]