| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is 126452576
Identifier: 126452576
GI number: 126452576
Start: 1571305
End: 1572180
Strand: Direct
Name: 126452576
Synonym: BURPS1106A_1616
Alternate gene names: NA
Gene position: 1571305-1572180 (Clockwise)
Preceding gene: 126453710
Following gene: 126451662
Centisome position: 39.4
GC content: 59.25
Gene sequence:
>876_bases ATGGTCGCGTTCGATCTCGACTCGAGGAATTTTCTGGCGTTTCAGTACGCGGTGATCAACCCGTTGCAAGTCGACGAAGA GGCTTGGGCGGACCTTGAGACCGTACCGCTTGTTCCTGATCGCTACCGGGAACAGGTGCATCTTTTTCCACGCCTAGTCA GTTTGACGCCGTTGGAGGCGAACGCGCGGGCCGACCTGCTGGCGCGCGCGCAGCAATGGGACCGCGAGTACGACGACCCG TATTTCTCCACGCTGCTCCATACGACGAAAGATATCGATTTCATCAGGACGCATCTGATCGCCCAAATGGAGCAATACCA TCTCGCCCGTCGCGAGTACGACGTGATTCGGCTGCACGATCCGAAAGTCCTGCGCCATTTGAGCTGGCTGCTGAGCGCGG ATCAATGGGAAAGTCTGCTTGGGCCGATTGAGGCGTGGGCGTGGCGCGAACCCGATGGGACGTGGTGGTATCGCGAGCGC GACGTGCGCGTGACGGATGTTCCTTCCCGGATGCGACTGTCGCCGGAACAATGGACGACGTTGCTGCGCTTCGGCGAGAT CAATCAAACGCTCATGCTGCTGTCGCGGGCCGCTCCTGACCTGGTCGACGATGCGAGTCTTGCGCAGCGTCTTAACGCGC TGCTAGCGGACGCGTGGAATATCCACCGCCTCACGGACCGCTCGGACCGAATACTGTATGCAATCCAGGCGATTCGCTTT CATCCGCGTATCCATGACCATCCCGAGATGCGCAGGCGGCTGAGGCAGCCGCACGACGATGACTCATCCTATGCCGATCG CTGTGACGATCTCGACGATGCGACCATGCAACGCGTGGTCGACGAAATGAACCATCCATACAAGGAACATGTATGA
Upstream 100 bases:
>100_bases GCGTCAGCGCAAATGCCGAAGAGCGAACCGAAGCTGTGCGAGTACAAGACGCGCGCGGCCGACGTTGCTCACGAAGGCAC GATGAAGTCGGCGGCTTGAC
Downstream 100 bases:
>100_bases ATTCGTCCGCTGGCTCTTCCTTGCCGCCGACCGTCTGTCAGTTCTGCGATAAAAAAGGCCTTCCGATTCTACCGCTGCGG TATGCGGTTGCACGACAGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MVAFDLDSRNFLAFQYAVINPLQVDEEAWADLETVPLVPDRYREQVHLFPRLVSLTPLEANARADLLARAQQWDREYDDP YFSTLLHTTKDIDFIRTHLIAQMEQYHLARREYDVIRLHDPKVLRHLSWLLSADQWESLLGPIEAWAWREPDGTWWYRER DVRVTDVPSRMRLSPEQWTTLLRFGEINQTLMLLSRAAPDLVDDASLAQRLNALLADAWNIHRLTDRSDRILYAIQAIRF HPRIHDHPEMRRRLRQPHDDDSSYADRCDDLDDATMQRVVDEMNHPYKEHV
Sequences:
>Translated_291_residues MVAFDLDSRNFLAFQYAVINPLQVDEEAWADLETVPLVPDRYREQVHLFPRLVSLTPLEANARADLLARAQQWDREYDDP YFSTLLHTTKDIDFIRTHLIAQMEQYHLARREYDVIRLHDPKVLRHLSWLLSADQWESLLGPIEAWAWREPDGTWWYRER DVRVTDVPSRMRLSPEQWTTLLRFGEINQTLMLLSRAAPDLVDDASLAQRLNALLADAWNIHRLTDRSDRILYAIQAIRF HPRIHDHPEMRRRLRQPHDDDSSYADRCDDLDDATMQRVVDEMNHPYKEHV >Mature_291_residues MVAFDLDSRNFLAFQYAVINPLQVDEEAWADLETVPLVPDRYREQVHLFPRLVSLTPLEANARADLLARAQQWDREYDDP YFSTLLHTTKDIDFIRTHLIAQMEQYHLARREYDVIRLHDPKVLRHLSWLLSADQWESLLGPIEAWAWREPDGTWWYRER DVRVTDVPSRMRLSPEQWTTLLRFGEINQTLMLLSRAAPDLVDDASLAQRLNALLADAWNIHRLTDRSDRILYAIQAIRF HPRIHDHPEMRRRLRQPHDDDSSYADRCDDLDDATMQRVVDEMNHPYKEHV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34612; Mature: 34612
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVAFDLDSRNFLAFQYAVINPLQVDEEAWADLETVPLVPDRYREQVHLFPRLVSLTPLEA CEEEECCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC NARADLLARAQQWDREYDDPYFSTLLHTTKDIDFIRTHLIAQMEQYHLARREYDVIRLHD CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC PKVLRHLSWLLSADQWESLLGPIEAWAWREPDGTWWYRERDVRVTDVPSRMRLSPEQWTT HHHHHHHHHHHCHHHHHHHHHHHHHHCEECCCCCEEEEECCCEEECCCHHHCCCHHHHHH LLRFGEINQTLMLLSRAAPDLVDDASLAQRLNALLADAWNIHRLTDRSDRILYAIQAIRF HHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHH HPRIHDHPEMRRRLRQPHDDDSSYADRCDDLDDATMQRVVDEMNHPYKEHV CCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHCC >Mature Secondary Structure MVAFDLDSRNFLAFQYAVINPLQVDEEAWADLETVPLVPDRYREQVHLFPRLVSLTPLEA CEEEECCCCCEEEEEEECCCCCCCCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCC NARADLLARAQQWDREYDDPYFSTLLHTTKDIDFIRTHLIAQMEQYHLARREYDVIRLHD CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC PKVLRHLSWLLSADQWESLLGPIEAWAWREPDGTWWYRERDVRVTDVPSRMRLSPEQWTT HHHHHHHHHHHCHHHHHHHHHHHHHHCEECCCCCEEEEECCCEEECCCHHHCCCHHHHHH LLRFGEINQTLMLLSRAAPDLVDDASLAQRLNALLADAWNIHRLTDRSDRILYAIQAIRF HHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHHHHCCCCCHHHHHHHHHHH HPRIHDHPEMRRRLRQPHDDDSSYADRCDDLDDATMQRVVDEMNHPYKEHV CCCCCCCHHHHHHHCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA