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The map label for this gene is 126452555

Identifier: 126452555

GI number: 126452555

Start: 2980507

End: 2981754

Strand: Reverse

Name: 126452555

Synonym: BURPS1106A_3052

Alternate gene names: NA

Gene position: 2981754-2980507 (Counterclockwise)

Preceding gene: 126453717

Following gene: 126451928

Centisome position: 74.76

GC content: 66.03

Gene sequence:

>1248_bases
ATGAAAATTCGCGCGATCATGGGCGCGCTCGGCGCCGCAGGCCTGTTGTTCGGCGCTGCCGCAGCGCAAGCGGCAGAGAA
TGTCACGGTGCTGCACTGGTGGACGTCGGGCGGCGAATCGAAGGCGGTCGGCGTGCTGAAGGACGACCTGCAGAAGCAGG
GCTACGTCTGGAAGGATTTCGCGGTGGCGGGCGGCGCGGGCGCCGCGGCGATGACCGCGCTGAAGACGAAGGTCATCAGC
GGCGACGCGCCGTCGGCCGCGCAGATCAAGGGGCCGCTGATCCAGGAATGGGCGGACCAGGGCGTGCTCGTGAACATCGA
CGCGGCCGCGGGCGACTGGAAGCAGAACCTGCCGCCCGAGATCGACAAGATCATCAAGTACAAGGGCAACACCGTCGCGG
CGCCGTTCTCGGTGCACCGCGTGAACTGGCTCTACATCAACAAGGCCGCGCTCGACAAGATCGGCGCGAAGCCGCCCGCG
ACGTGGCCGGAATTCTTCCAGGTGGCCGACAAGCTGAAGGCGGCGGGCATCCAGCCGGTCGCGATGGGCGGCCAGCCGTG
GCAGGACCTGACGCTGTGGGAAGACGTCGTGCTCTCGCAAGGCGCCGACTTCTACAGGAAGGCGCTCGTCGAGCTCGACC
AGAAGACGCTCACGTCGGACAAGATGCTCGAAGTCTTCAACACCGTCCGCAAGATCCAGGGCTACTTCGATTCGGGCCGC
AACGGCCGCGACTGGAATCTGGCCACGGCGATGGTGATCAACGGCCGCGCCGGCATGCAGTTCATGGGCGACTGGGCGAA
GGGCGAGTTCGAGGCGGCCGGCAAGAAGCCGGGCAAGGACTATATCTGCGCGGCGGTGCCGGGCACGGCGAATGCGTACA
CGTTCAACGTCGATTCGTTCGTGTTCTTCCAGCAGAAGGGCCAGAAGGCGGCCACGCCCGGCCAGATCGCGCTCGCCAAG
ACGATCATGACGCCCGCGTTCCAGGAGCAATTCAGCTTGCTGAAGGGTTCGATCCCGGTGCGCCTCGGCGTGAAGATGGA
CAAGTTCGACGATTGCGCGAAGAAGTCCTACGCCGACGAGCAGACGGCGATCAAATCGGGCGGCTACGTGCCGTCGCTCG
CGCACGGCATGGCGCAGGGCGACGCGACCGCGGGCGCGATTTCCGACGTCGTGACGAAGTTCATGAACTCGCAGCAGGAC
GCGAAGAGCGCGCTCGCCGCGCTCGCGCGCGCCGCGAAGGTGAAGTAA

Upstream 100 bases:

>100_bases
CGCGGCTCGATTTCCCGTGTCGTTCCGTAGCAAAGCCGGCTTTCGCGCCTCCGCGCAGTCGAAAGCCTGACGAATCGATC
CAATCTGGAGGAGATAACTG

Downstream 100 bases:

>100_bases
CGCACGGCGCGAGCGCCCGGATGCGCGCATCGTTTCGCGCCGGGCGCTTCGTGCTGCATCCGCAGCAAACGGGCCGCGAG
TCGGCTCGCGCCGTACCCGT

Product: carbohydrate ABC transporter periplasmic binding protein

Products: NA

Alternate protein names: Immunogenic 39 kDa protein; P39 [H]

Number of amino acids: Translated: 415; Mature: 415

Protein sequence:

>415_residues
MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDFAVAGGAGAAAMTALKTKVIS
GDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPEIDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPA
TWPEFFQVADKLKAAGIQPVAMGGQPWQDLTLWEDVVLSQGADFYRKALVELDQKTLTSDKMLEVFNTVRKIQGYFDSGR
NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSFVFFQQKGQKAATPGQIALAK
TIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADEQTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQD
AKSALAALARAAKVK

Sequences:

>Translated_415_residues
MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDFAVAGGAGAAAMTALKTKVIS
GDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPEIDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPA
TWPEFFQVADKLKAAGIQPVAMGGQPWQDLTLWEDVVLSQGADFYRKALVELDQKTLTSDKMLEVFNTVRKIQGYFDSGR
NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSFVFFQQKGQKAATPGQIALAK
TIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADEQTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQD
AKSALAALARAAKVK
>Mature_415_residues
MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDFAVAGGAGAAAMTALKTKVIS
GDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPEIDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPA
TWPEFFQVADKLKAAGIQPVAMGGQPWQDLTLWEDVVLSQGADFYRKALVELDQKTLTSDKMLEVFNTVRKIQGYFDSGR
NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSFVFFQQKGQKAATPGQIALAK
TIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADEQTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQD
AKSALAALARAAKVK

Specific function: Part of a binding-protein-dependent transport system for a sugar (Potential) [H]

COG id: COG1653

COG function: function code G; ABC-type sugar transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006059 [H]

Pfam domain/function: PF01547 SBP_bac_1 [H]

EC number: NA

Molecular weight: Translated: 44302; Mature: 44302

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDF
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEHHHHHHHHHCCCEEEEH
AVAGGAGAAAMTALKTKVISGDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPE
EECCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCHH
IDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPATWPEFFQVADKLKAAGIQPV
HHHHHHCCCCEEECCEEEEEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEE
AMGGQPWQDLTLWEDVVLSQGADFYRKALVELDQKTLTSDKMLEVFNTVRKIQGYFDSGR
ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSF
CCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEE
VFFQQKGQKAATPGQIALAKTIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADE
EEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCH
QTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQDAKSALAALARAAKVK
HHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKIRAIMGALGAAGLLFGAAAAQAAENVTVLHWWTSGGESKAVGVLKDDLQKQGYVWKDF
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCEEHHHHHHHHHCCCEEEEH
AVAGGAGAAAMTALKTKVISGDAPSAAQIKGPLIQEWADQGVLVNIDAAAGDWKQNLPPE
EECCCCCHHHHHHHHHHHCCCCCCCHHHHCCHHHHHHCCCCEEEEEECCCCCCCCCCCHH
IDKIIKYKGNTVAAPFSVHRVNWLYINKAALDKIGAKPPATWPEFFQVADKLKAAGIQPV
HHHHHHCCCCEEECCEEEEEEEEEEEEHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCEE
AMGGQPWQDLTLWEDVVLSQGADFYRKALVELDQKTLTSDKMLEVFNTVRKIQGYFDSGR
ECCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
NGRDWNLATAMVINGRAGMQFMGDWAKGEFEAAGKKPGKDYICAAVPGTANAYTFNVDSF
CCCCCCEEEEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEECCEE
VFFQQKGQKAATPGQIALAKTIMTPAFQEQFSLLKGSIPVRLGVKMDKFDDCAKKSYADE
EEEECCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCH
QTAIKSGGYVPSLAHGMAQGDATAGAISDVVTKFMNSQQDAKSALAALARAAKVK
HHHHHCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9009303; 10235622 [H]