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The map label for this gene is galE [H]

Identifier: 126452522

GI number: 126452522

Start: 3049567

End: 3050532

Strand: Reverse

Name: galE [H]

Synonym: BURPS1106A_3129

Alternate gene names: 126452522

Gene position: 3050532-3049567 (Counterclockwise)

Preceding gene: 126451674

Following gene: 126453366

Centisome position: 76.48

GC content: 66.25

Gene sequence:

>966_bases
ATGAGCAGGGTCATCGTTACGGGCGCGAACGGGTTCGTCGGGCGCGCGCTCTGCCGCGCGCTGCTCGCGGCCGGGCACGA
GGTTACGGGGCTCGTGCGCCGCCGGGGTGTTTGCACCGAAGGCGTGTCGGAGTGGGTGCACGAGGCTGATGATTTCGATG
GTGTCGCCGACCGTTGGCCTGCGGGTCTGCAGGTGGATGCCGTCGTGCATCTCGCCGCCCGCGTTCATATGATGCGTGAC
CGCTCGCCCGATCCGGACGCTGCGTTTCGTGCATCGAACGTTGCAGCGACGATGCGCGTGGCTCGTGCTGCACGGCAGCA
AGGCGCAAGACGGTTCGTGTTTCTGAGCAGCGTCAAAGCGATTGCTGAATCCGACGGCGGCACGCCGCTGTGCGAGAATT
CGATGCCGGCGCCGCAGGACGCTTACGGACGCTCGAAGCTCGAAGCCGAACGTGCGCTTGAACAATTGCGCGACGAACTG
AGCTTCGACACGGTCATCGTCAGGCCGCCGCTCGTGTATGGCCCGGGGGTTCGCGCCAATTTCCTGAGCCTGATGCGTGC
GGTATCACGAGGCGTGCCGCTGCCGCTGGGAGCGGTGCGCGCGCGACGCAGTATGGTGTACGTCGACAATCTCGCCGACG
CGGTGATGCGCTGCGTAACGGAACCAGCGGCCACGAACGGGTGCTTTCATGTCGCGGATAGTGATATGCCGCCGACCATT
GCCGAATTGCTCGATGACATCGGGCATCATCTTGGACGCCCCGCACGTCTGTTGCCCGTGCCGGAGCGTTTGCTGCGCGT
CGCGGGGGCGTTGACGGGGCGCGCGGCGCAGATCGATCGTCTGACGAGCGACCTGCGGCTCGACACGACGCACATTCGCA
CGGTGCTCGACTGGCGTCCGCCGCGCTCGAGCGAAGAGGGGCTCGCCGAAACGGCGTGCTGGTTCAAGTCGCTGGGCCGA
CGCTAG

Upstream 100 bases:

>100_bases
GCCACTATGGCGGTGGCGCGGCCCGTAAAGGGATGCGTCATGTTCGCCTGTTCGCGATATCGGCATACCACTTCTTCAAC
CGCTTCGGCTGGAAATGGCT

Downstream 100 bases:

>100_bases
TCGCCGGAAGAGGCACGATGTTCCAACTGAATTTGACCATCTTGTCCGCGATGGCGTTCGCATCGATCGCTGCGATCGTC
ACCGCGCTTATTCTCAAATG

Product: NAD-dependent epimerase/dehydratase family protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 321; Mature: 320

Protein sequence:

>321_residues
MSRVIVTGANGFVGRALCRALLAAGHEVTGLVRRRGVCTEGVSEWVHEADDFDGVADRWPAGLQVDAVVHLAARVHMMRD
RSPDPDAAFRASNVAATMRVARAARQQGARRFVFLSSVKAIAESDGGTPLCENSMPAPQDAYGRSKLEAERALEQLRDEL
SFDTVIVRPPLVYGPGVRANFLSLMRAVSRGVPLPLGAVRARRSMVYVDNLADAVMRCVTEPAATNGCFHVADSDMPPTI
AELLDDIGHHLGRPARLLPVPERLLRVAGALTGRAAQIDRLTSDLRLDTTHIRTVLDWRPPRSSEEGLAETACWFKSLGR
R

Sequences:

>Translated_321_residues
MSRVIVTGANGFVGRALCRALLAAGHEVTGLVRRRGVCTEGVSEWVHEADDFDGVADRWPAGLQVDAVVHLAARVHMMRD
RSPDPDAAFRASNVAATMRVARAARQQGARRFVFLSSVKAIAESDGGTPLCENSMPAPQDAYGRSKLEAERALEQLRDEL
SFDTVIVRPPLVYGPGVRANFLSLMRAVSRGVPLPLGAVRARRSMVYVDNLADAVMRCVTEPAATNGCFHVADSDMPPTI
AELLDDIGHHLGRPARLLPVPERLLRVAGALTGRAAQIDRLTSDLRLDTTHIRTVLDWRPPRSSEEGLAETACWFKSLGR
R
>Mature_320_residues
SRVIVTGANGFVGRALCRALLAAGHEVTGLVRRRGVCTEGVSEWVHEADDFDGVADRWPAGLQVDAVVHLAARVHMMRDR
SPDPDAAFRASNVAATMRVARAARQQGARRFVFLSSVKAIAESDGGTPLCENSMPAPQDAYGRSKLEAERALEQLRDELS
FDTVIVRPPLVYGPGVRANFLSLMRAVSRGVPLPLGAVRARRSMVYVDNLADAVMRCVTEPAATNGCFHVADSDMPPTIA
ELLDDIGHHLGRPARLLPVPERLLRVAGALTGRAAQIDRLTSDLRLDTTHIRTVLDWRPPRSSEEGLAETACWFKSLGRR

Specific function: INVOLVED IN THE SYNTHESIS OF ENTEROBACTERIAL COMMON ANTIGEN (ECA) AND REQUIRED FOR SYNTHESIS OF LIPOPOLYSACCHARIDE O-SIDE CHAINS. [C]

COG id: COG0451

COG function: function code MG; Nucleoside-diphosphate-sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001509
- InterPro:   IPR016040 [H]

Pfam domain/function: PF01370 Epimerase [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 34941; Mature: 34810

Theoretical pI: Translated: 8.62; Mature: 8.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVIVTGANGFVGRALCRALLAAGHEVTGLVRRRGVCTEGVSEWVHEADDFDGVADRWP
CCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCC
AGLQVDAVVHLAARVHMMRDRSPDPDAAFRASNVAATMRVARAARQQGARRFVFLSSVKA
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
IAESDGGTPLCENSMPAPQDAYGRSKLEAERALEQLRDELSFDTVIVRPPLVYGPGVRAN
HHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHH
FLSLMRAVSRGVPLPLGAVRARRSMVYVDNLADAVMRCVTEPAATNGCFHVADSDMPPTI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHH
AELLDDIGHHLGRPARLLPVPERLLRVAGALTGRAAQIDRLTSDLRLDTTHIRTVLDWRP
HHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCC
PRSSEEGLAETACWFKSLGRR
CCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SRVIVTGANGFVGRALCRALLAAGHEVTGLVRRRGVCTEGVSEWVHEADDFDGVADRWP
CCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHCC
AGLQVDAVVHLAARVHMMRDRSPDPDAAFRASNVAATMRVARAARQQGARRFVFLSSVKA
CCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHH
IAESDGGTPLCENSMPAPQDAYGRSKLEAERALEQLRDELSFDTVIVRPPLVYGPGVRAN
HHHCCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHCCCEEEECCCEEECCCCHHH
FLSLMRAVSRGVPLPLGAVRARRSMVYVDNLADAVMRCVTEPAATNGCFHVADSDMPPTI
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCCCCHHH
AELLDDIGHHLGRPARLLPVPERLLRVAGALTGRAAQIDRLTSDLRLDTTHIRTVLDWRP
HHHHHHHHHHHCCCCEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHCCC
PRSSEEGLAETACWFKSLGRR
CCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8820651; 10521656 [H]