| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is ytfP [C]
Identifier: 126452507
GI number: 126452507
Start: 2489037
End: 2489471
Strand: Reverse
Name: ytfP [C]
Synonym: BURPS1106A_2530
Alternate gene names: 126452507
Gene position: 2489471-2489037 (Counterclockwise)
Preceding gene: 126451685
Following gene: 126452715
Centisome position: 62.42
GC content: 68.97
Gene sequence:
>435_bases ATGGCACGATTGAAACAAGGAAGGAAGATGCGCTACGTATTCTGCTACGGGACCCTGAGAGCGGGCGAGATCAACGACAT CGGCCGGGCGGCGGCGACGCACGGCATCGCGGCGCCGAGGCTCGTCGGCGCGGTGGCGGTGGCGGGGCGCCTGTATGACT TCGGCAACTATCCGGGGATGGTCGCGGGCGGTGGCCGCGATCTCGTCTGGGGCGACGTCTACGCGATCGACGAGCGGCTC GTGCCGGTGCTCGACGAGATCGAGGAAGTGTACCCGGGCGTCGAGGGGCTGTTCGTGCGGCAGCGGGCGTCGGTCGAACT CGGCGGGCGCCGGTACGATTGCCTGTATTACCCGGTCGGTGCGCACGCGATCGCGGACAAGCCGCGCATCGAGTCGGGCG ACTGGGTGCAGTATCGGCGCGCGCGCACCGCGTGA
Upstream 100 bases:
>100_bases GTACGCGCATCGTGCCGGGCGACTGGATCTACGCGGATGCCGACGGCGTCCTCGTCAGCGACGACGCGCTGCTCGAGTGA CGCGGCGGCGTGCCGGTTCG
Downstream 100 bases:
>100_bases CGCGTAGCCGCGGCGACGCGGCGACGCGCAGGCGAGCGCGCCGAATGCCGTCGCGTACAGGCGCGGCGGCGCGAGCCGGG CGTCAAGTGTTCGTCGCGCG
Product: hypothetical protein
Products: NA
Alternate protein names: Butirosin Biosynthesis Protein BtrG; AIG2-Like Family
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLYDFGNYPGMVAGGGRDLVWGDVYAIDERL VPVLDEIEEVYPGVEGLFVRQRASVELGGRRYDCLYYPVGAHAIADKPRIESGDWVQYRRARTA
Sequences:
>Translated_144_residues MARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLYDFGNYPGMVAGGGRDLVWGDVYAIDERL VPVLDEIEEVYPGVEGLFVRQRASVELGGRRYDCLYYPVGAHAIADKPRIESGDWVQYRRARTA >Mature_143_residues ARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLYDFGNYPGMVAGGGRDLVWGDVYAIDERLV PVLDEIEEVYPGVEGLFVRQRASVELGGRRYDCLYYPVGAHAIADKPRIESGDWVQYRRARTA
Specific function: Unknown
COG id: COG2105
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15893; Mature: 15762
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLYDFGNYPGM CCCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCE VAGGGRDLVWGDVYAIDERLVPVLDEIEEVYPGVEGLFVRQRASVELGGRRYDCLYYPVG EECCCCCEEECCEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCEEEEEEEEECC AHAIADKPRIESGDWVQYRRARTA CCCCCCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure ARLKQGRKMRYVFCYGTLRAGEINDIGRAAATHGIAAPRLVGAVAVAGRLYDFGNYPGM CCCCCCCEEEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCCE VAGGGRDLVWGDVYAIDERLVPVLDEIEEVYPGVEGLFVRQRASVELGGRRYDCLYYPVG EECCCCCEEECCEEEHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCEEEEEEEEECC AHAIADKPRIESGDWVQYRRARTA CCCCCCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA