Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

Click here to switch to the map view.

The map label for this gene is 126452499

Identifier: 126452499

GI number: 126452499

Start: 1769112

End: 1769738

Strand: Direct

Name: 126452499

Synonym: BURPS1106A_1809

Alternate gene names: NA

Gene position: 1769112-1769738 (Clockwise)

Preceding gene: 126451652

Following gene: 126451659

Centisome position: 44.36

GC content: 65.87

Gene sequence:

>627_bases
ATGACGATCGGCCAGGACGTGCATCTCATTCCCGCGAAGCTCGACGCGCTGCGCCCGACGCAGATCACGGTCGGCTATCG
CGAAGTGAAGGCCAAGCGCAAGCATTGGAAGGCGCTCGGCAAGAAGGCGCGCAAGGCCGCGATCGAATCGCACTGGTTTC
CGGCCGTGCTCGGGCCGGGCGGCGATTATTTCATCACCGATCACCATCATCTCGGGCTCGCGCTCCTCGAGGAGGGCGTG
ACCGAAGTGAAGGCGATGCTGCTGAAGGATCTGTCCTGGCTCGACGAGACGATCTTCTGGCGGATGATGGAGCACAACCA
GTGGGTGCATCCGTTCGGCGCGAACGGCGCGCGCCACGATTACGACCATCTGCCGACCTCGCTCGTCGGGCTGAAGGACG
ATCCGTACCGCAGTCTCGCCGGCGAGTTGCGCGCGGCCGGCGGCTATGCGAAGGACGCGACGCCGTTCAGCGAATTCCTG
TGGGCCGATTTCCTGCGCCCGAGGATCGCGCTTGCGCAAATCCGCAAGGAATTCGCGAAGGCGCTCGAGGCGGCGCTCGG
CTATGCGCACACGCAGGAGGCGCGCTATCTGCCGGGCTGGTCCGGCGTGATCGCGGCGCCGCGCTGA

Upstream 100 bases:

>100_bases
ACGCGGCACGGCGTCTCGCGCAAACTTCAAGGGCAATACGGTATTAACGCGAACGGCGATCCCATGTATCGTTGCCGACA
TCCTATTCGGGAGCCCCATC

Downstream 100 bases:

>100_bases
GCGCCACACCTTCGTTCGCACGACGGGCAACACCCACGGAACGCGCATGGATCTCCGCTCGAAGCACATCGACGCGCCGC
CGCAGCATGCCGCGCATTTC

Product: hypothetical protein

Products: NA

Alternate protein names: ParB-Like Nuclease Superfamily

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MTIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPGGDYFITDHHHLGLALLEEGV
TEVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHDYDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFL
WADFLRPRIALAQIRKEFAKALEAALGYAHTQEARYLPGWSGVIAAPR

Sequences:

>Translated_208_residues
MTIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPGGDYFITDHHHLGLALLEEGV
TEVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHDYDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFL
WADFLRPRIALAQIRKEFAKALEAALGYAHTQEARYLPGWSGVIAAPR
>Mature_207_residues
TIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPGGDYFITDHHHLGLALLEEGVT
EVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHDYDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFLW
ADFLRPRIALAQIRKEFAKALEAALGYAHTQEARYLPGWSGVIAAPR

Specific function: Unknown

COG id: COG4318

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23386; Mature: 23255

Theoretical pI: Translated: 9.51; Mature: 9.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPG
CCCCCCCEEEHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
GDYFITDHHHLGLALLEEGVTEVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHD
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFLWADFLRPRIALAQIRKEFAK
HHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEAALGYAHTQEARYLPGWSGVIAAPR
HHHHHHHHHHCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TIGQDVHLIPAKLDALRPTQITVGYREVKAKRKHWKALGKKARKAAIESHWFPAVLGPG
CCCCCCEEEHHHHHCCCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCC
GDYFITDHHHLGLALLEEGVTEVKAMLLKDLSWLDETIFWRMMEHNQWVHPFGANGARHD
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
YDHLPTSLVGLKDDPYRSLAGELRAAGGYAKDATPFSEFLWADFLRPRIALAQIRKEFAK
HHHCCHHHCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ALEAALGYAHTQEARYLPGWSGVIAAPR
HHHHHHHHHHCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA