Click here to switch to the map view.

The map label for this gene is yebQ [H]

Identifier: 126452483

GI number: 126452483

Start: 1093530

End: 1094903

Strand: Reverse

Name: yebQ [H]

Synonym: BURPS1106A_1113

Alternate gene names: 126452483

Gene position: 1094903-1093530 (Counterclockwise)

Preceding gene: 126454401

Following gene: 126455313

Centisome position: 27.45

GC content: 71.47

Gene sequence:

>1374_bases
ATGAACGCCGACTCCGGACTGCCGTTCCCGCAACGCTACTGGGCGATCGTCTGCGTCGCGCTGGGCATCACGCTCGCCGT
GCTCGACGGCGCGATCGCGAACGTCGCGCTGCCGACGATCGCCCGCGATCTGCGCGCCTCCGACGCCGCGTCGATCTGGA
TCGTCAACGCGTACCAACTCGCCGTCACGATCTCGCTGCTGCCGCTCGCCTCGCTCGGGGACCGCATCGGCTACCGGCGC
GTCTACATCGCGGGGCTCATGCTCTTCACGGCGGCGTCGCTCGGCTGCGCGCTGTCGGGCACGCTGCCCGCGCTCGCGAC
GCTGCGCGTGATCCAGGGCTTCGGCGCGGCCGGCATCATGAGCGTGAATACCGCGCTCGTGCGGATGATCTATCCGTCTT
CGCAACTCGGGCGCGGCGTCGCGATCAACGCAATGGTCGTCGCGCTGTCGTCGGCGGTCGGGCCGACCGTCGCGTCCGCG
GTGCTCGCCGTCGCGCCGTGGCCGTGGCTCTTCGCGATCAACGTGCCGATCGGCGTCGCCGCCGTGTGCGGCAGCCTGCG
CGCGCTGCCGGCGAATCCGGGCCGCAGCGCGCCGTACGATTTCATCGGCGCCGTGATGAACGCCTGCGTGTTCGGGCTGT
TGATCGTGTCCGTCGACGGGCTCGGCCACGGCGGGAATCGCGCGAGCGTCGCGCTCACCGCGCTCGTGGCCGCCGTGATC
GGCTACTTCTTCGTCAAGCGCCAGTTGACGCAGCCCGCGCCGCTGTTGCCCGTCGACCTGATGCGCGTTCCGATCTTCGC
GCTGTCGATCGGCACATCGGTCGCGTCGTTCACATCGCAGATGCTCGCGTTCGTCGCGCTGCCGTTCTGGCTACAGAACA
CGCTCGGCTTCTCGCAGGTCCAGACGGGGCTCTACATGACGCCGTGGCCGCTCGTGATCGTCGTCGCGGCGCCGCTCGCG
GGCGTGCTGTCCGACCGCTATTCGGCGGGCGCGCTGGGCGGCATCGGCCTCGCCCTGTTCGCATCCGGCCTGTTCGCGCT
CGCGACGATCGGTGCGCACCCGACGCCCGTCGACATCGTGTGGCGGATGGCGCTGTGCGGCGCGGGCTTCGGGCTCTTCC
AGTCGCCGAACAACCGCGCGATCCTGTCGTCCGCGCCGCGCGAGCGCGCGGGCGGCGCAAGCGGGATGCTCGGCACCGCC
CGGCTCACCGGACAAACGCTCGGCGCCGCGCTCGTCGCGCTGATCTTCGGCATCGCGCCGCAGCACGGGCCGACGATCGC
GCTCTACGCGGCGAGCTCGTTCGCCGCCGTCGCGGCGGCCGTGAGCCTGCTGAGAATCCGCGCGCGGCGCGATACGACCG
CCGCAGCGGGTTGA

Upstream 100 bases:

>100_bases
CCGGCCCTCGCCGCCGGCGGCACGGCTCGCCCGCGCATGCCGGCGGTTGCGTGCGCAACGGACTCGCCGCCCAGCTTCTC
GCCTCGCCACCGCCTCCGCC

Downstream 100 bases:

>100_bases
GCGCCGTGGAACCGCCCGCTTGGGTCCGGGGTCGAGTCCGCTTGGCCTAGGTCCGCCTAGCAGGCTGTTGAAATTGGATA
CGGTGTAAACGGGCGTTGCG

Product: EmrB/QacA family drug resistance transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MNADSGLPFPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQLAVTISLLPLASLGDRIGYRR
VYIAGLMLFTAASLGCALSGTLPALATLRVIQGFGAAGIMSVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTVASA
VLAVAPWPWLFAINVPIGVAAVCGSLRALPANPGRSAPYDFIGAVMNACVFGLLIVSVDGLGHGGNRASVALTALVAAVI
GYFFVKRQLTQPAPLLPVDLMRVPIFALSIGTSVASFTSQMLAFVALPFWLQNTLGFSQVQTGLYMTPWPLVIVVAAPLA
GVLSDRYSAGALGGIGLALFASGLFALATIGAHPTPVDIVWRMALCGAGFGLFQSPNNRAILSSAPRERAGGASGMLGTA
RLTGQTLGAALVALIFGIAPQHGPTIALYAASSFAAVAAAVSLLRIRARRDTTAAAG

Sequences:

>Translated_457_residues
MNADSGLPFPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQLAVTISLLPLASLGDRIGYRR
VYIAGLMLFTAASLGCALSGTLPALATLRVIQGFGAAGIMSVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTVASA
VLAVAPWPWLFAINVPIGVAAVCGSLRALPANPGRSAPYDFIGAVMNACVFGLLIVSVDGLGHGGNRASVALTALVAAVI
GYFFVKRQLTQPAPLLPVDLMRVPIFALSIGTSVASFTSQMLAFVALPFWLQNTLGFSQVQTGLYMTPWPLVIVVAAPLA
GVLSDRYSAGALGGIGLALFASGLFALATIGAHPTPVDIVWRMALCGAGFGLFQSPNNRAILSSAPRERAGGASGMLGTA
RLTGQTLGAALVALIFGIAPQHGPTIALYAASSFAAVAAAVSLLRIRARRDTTAAAG
>Mature_457_residues
MNADSGLPFPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQLAVTISLLPLASLGDRIGYRR
VYIAGLMLFTAASLGCALSGTLPALATLRVIQGFGAAGIMSVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTVASA
VLAVAPWPWLFAINVPIGVAAVCGSLRALPANPGRSAPYDFIGAVMNACVFGLLIVSVDGLGHGGNRASVALTALVAAVI
GYFFVKRQLTQPAPLLPVDLMRVPIFALSIGTSVASFTSQMLAFVALPFWLQNTLGFSQVQTGLYMTPWPLVIVVAAPLA
GVLSDRYSAGALGGIGLALFASGLFALATIGAHPTPVDIVWRMALCGAGFGLFQSPNNRAILSSAPRERAGGASGMLGTA
RLTGQTLGAALVALIFGIAPQHGPTIALYAASSFAAVAAAVSLLRIRARRDTTAAAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily. TCR/tet family [H]

Homologues:

Organism=Escherichia coli, GI87081983, Length=449, Percent_Identity=57.2383073496659, Blast_Score=489, Evalue=1e-139,
Organism=Escherichia coli, GI1790195, Length=303, Percent_Identity=30.03300330033, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1788392, Length=306, Percent_Identity=30.3921568627451, Blast_Score=111, Evalue=8e-26,
Organism=Escherichia coli, GI1789042, Length=403, Percent_Identity=26.0545905707196, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI1788710, Length=416, Percent_Identity=24.7596153846154, Blast_Score=103, Evalue=2e-23,
Organism=Saccharomyces cerevisiae, GI6325455, Length=201, Percent_Identity=27.8606965174129, Blast_Score=71, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196
- InterPro:   IPR001411 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46736; Mature: 46736

Theoretical pI: Translated: 10.39; Mature: 10.39

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNADSGLPFPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHEEH
AVTISLLPLASLGDRIGYRRVYIAGLMLFTAASLGCALSGTLPALATLRVIQGFGAAGIM
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCHHH
SVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTVASAVLAVAPWPWLFAINVPIGVA
HHHHHHHHHCCCCHHHCCCEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCHHHH
AVCGSLRALPANPGRSAPYDFIGAVMNACVFGLLIVSVDGLGHGGNRASVALTALVAAVI
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
GYFFVKRQLTQPAPLLPVDLMRVPIFALSIGTSVASFTSQMLAFVALPFWLQNTLGFSQV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QTGLYMTPWPLVIVVAAPLAGVLSDRYSAGALGGIGLALFASGLFALATIGAHPTPVDIV
HCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WRMALCGAGFGLFQSPNNRAILSSAPRERAGGASGMLGTARLTGQTLGAALVALIFGIAP
HHHHHHHCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
QHGPTIALYAASSFAAVAAAVSLLRIRARRDTTAAAG
CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MNADSGLPFPQRYWAIVCVALGITLAVLDGAIANVALPTIARDLRASDAASIWIVNAYQL
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEHEEH
AVTISLLPLASLGDRIGYRRVYIAGLMLFTAASLGCALSGTLPALATLRVIQGFGAAGIM
HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHCCCCCHHH
SVNTALVRMIYPSSQLGRGVAINAMVVALSSAVGPTVASAVLAVAPWPWLFAINVPIGVA
HHHHHHHHHCCCCHHHCCCEEHHHHHHHHHHHCCHHHHHHHHHHCCCCEEEEEECCHHHH
AVCGSLRALPANPGRSAPYDFIGAVMNACVFGLLIVSVDGLGHGGNRASVALTALVAAVI
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
GYFFVKRQLTQPAPLLPVDLMRVPIFALSIGTSVASFTSQMLAFVALPFWLQNTLGFSQV
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHH
QTGLYMTPWPLVIVVAAPLAGVLSDRYSAGALGGIGLALFASGLFALATIGAHPTPVDIV
HCCCEECCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHH
WRMALCGAGFGLFQSPNNRAILSSAPRERAGGASGMLGTARLTGQTLGAALVALIFGIAP
HHHHHHHCCCCCCCCCCCCEEECCCCHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC
QHGPTIALYAASSFAAVAAAVSLLRIRARRDTTAAAG
CCCCEEEEEECHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9097040; 9278503 [H]