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The map label for this gene is yfiH [H]

Identifier: 126452453

GI number: 126452453

Start: 2193114

End: 2193950

Strand: Reverse

Name: yfiH [H]

Synonym: BURPS1106A_2204

Alternate gene names: 126452453

Gene position: 2193950-2193114 (Counterclockwise)

Preceding gene: 126454439

Following gene: 126451661

Centisome position: 55.01

GC content: 74.79

Gene sequence:

>837_bases
ATGACGATGTTGCGACCCCTGACGCTGGCCGATTGCGTGCAACCCGATTGGCAGGCGCCGCCGCGCGTGCGCGCGCTCGT
GTCGACGCGCAATGGCGGCGTGAGCGAGCCGCCTTATGGCGCGTGGGGCGGTGACGGCGGCGAGGTCGCGGGCGGGATGA
ATCTCGGCCGGCACACGGGTGACGATCCCGCGCATGTCGAAGCGAATCGCGCGCGGCTGCTCGCGTTGGCGGGCCAGTCG
CGCGCCGCGTGGCTCGAGCAGGTCCACGGCACGGAGGTGGTGCGCGCGGAAGACGTGCTCGCCGCAGGCGAAGGTGGTGC
CGTGCGCGCGGATGCGAGCGTCGCGGCGACGCCGGGCGCCGTCTGCGTCGTGATGGTCGCCGACTGCCTGCCGGTGCTGC
TGTGCGATGACGCGGGGCGCGCGGTCGGCGCCGCGCATGCGGGCTGGCGCGGCCTCGTCGCGGGCATCGTCGAGAAGACG
GCCGAGCGCGTCGCGGCGCTGGCGGGCGGCGGTGCCGACCGCCTGCACGCGTATCTCGGCCCGGCCATCGGCCCGGGCGC
GTTCGAGGTCGGCGCGGACGTCCGCTCGGCCTTTCTCGATGCGGCGCCGCTTGCCGACTACGCGGCCACGGAGTGCGCGT
TCGCGGCGCGCGCGCACGCGCCCGGCAAATATCTGGCGAATCTCTATGCGCTCGCGCGGCTGCGCCTCGCACGCGTCGGC
GTCACGCGCGTGAGCGGCGGCGCCGCGTGCACGGCGACCGAGCGCGAGCGCTTTTATTCGTATCGGCGCGACCGCGTGAC
GGGCCGCATGGCCGCGCTGATCTGGCTCGCGGACTGA

Upstream 100 bases:

>100_bases
CGGTGCGGACGATGCGGAATTCGGCGACGATGACGCTGTCTATGACGACGGTTACGATGAAGGCATGCCGTATGCCGACG
ATGATGAGGATTGACTGCCG

Downstream 100 bases:

>100_bases
CTCGCGGACTGACGGCGGGCAGCCGCGCGCCATCGCCGGCGCGGCGAGCCGGGAGGGCGGGCAGGCGCTGTTTTTGCGAC
GCCGCGGCGCCCCGGATTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 278; Mature: 277

Protein sequence:

>278_residues
MTMLRPLTLADCVQPDWQAPPRVRALVSTRNGGVSEPPYGAWGGDGGEVAGGMNLGRHTGDDPAHVEANRARLLALAGQS
RAAWLEQVHGTEVVRAEDVLAAGEGGAVRADASVAATPGAVCVVMVADCLPVLLCDDAGRAVGAAHAGWRGLVAGIVEKT
AERVAALAGGGADRLHAYLGPAIGPGAFEVGADVRSAFLDAAPLADYAATECAFAARAHAPGKYLANLYALARLRLARVG
VTRVSGGAACTATERERFYSYRRDRVTGRMAALIWLAD

Sequences:

>Translated_278_residues
MTMLRPLTLADCVQPDWQAPPRVRALVSTRNGGVSEPPYGAWGGDGGEVAGGMNLGRHTGDDPAHVEANRARLLALAGQS
RAAWLEQVHGTEVVRAEDVLAAGEGGAVRADASVAATPGAVCVVMVADCLPVLLCDDAGRAVGAAHAGWRGLVAGIVEKT
AERVAALAGGGADRLHAYLGPAIGPGAFEVGADVRSAFLDAAPLADYAATECAFAARAHAPGKYLANLYALARLRLARVG
VTRVSGGAACTATERERFYSYRRDRVTGRMAALIWLAD
>Mature_277_residues
TMLRPLTLADCVQPDWQAPPRVRALVSTRNGGVSEPPYGAWGGDGGEVAGGMNLGRHTGDDPAHVEANRARLLALAGQSR
AAWLEQVHGTEVVRAEDVLAAGEGGAVRADASVAATPGAVCVVMVADCLPVLLCDDAGRAVGAAHAGWRGLVAGIVEKTA
ERVAALAGGGADRLHAYLGPAIGPGAFEVGADVRSAFLDAAPLADYAATECAFAARAHAPGKYLANLYALARLRLARVGV
TRVSGGAACTATERERFYSYRRDRVTGRMAALIWLAD

Specific function: Unknown

COG id: COG1496

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0124 family [H]

Homologues:

Organism=Escherichia coli, GI1788945, Length=269, Percent_Identity=49.4423791821561, Blast_Score=235, Evalue=3e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003730
- InterPro:   IPR011324 [H]

Pfam domain/function: PF02578 Cu-oxidase_4 [H]

EC number: NA

Molecular weight: Translated: 28690; Mature: 28559

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTMLRPLTLADCVQPDWQAPPRVRALVSTRNGGVSEPPYGAWGGDGGEVAGGMNLGRHTG
CCCCCCCHHHHHCCCCCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDPAHVEANRARLLALAGQSRAAWLEQVHGTEVVRAEDVLAAGEGGAVRADASVAATPGA
CCCCEEECCCEEEEEECCCCHHHHHHHHCCCCEEEHHHHEECCCCCCEEECCCCCCCCCH
VCVVMVADCLPVLLCDDAGRAVGAAHAGWRGLVAGIVEKTAERVAALAGGGADRLHAYLG
HHHHHHHHHHHEEEECCCCCHHHCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
PAIGPGAFEVGADVRSAFLDAAPLADYAATECAFAARAHAPGKYLANLYALARLRLARVG
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
VTRVSGGAACTATERERFYSYRRDRVTGRMAALIWLAD
CEEECCCEEECHHHHHHHHHHHHHHHHCEEEEEEEECC
>Mature Secondary Structure 
TMLRPLTLADCVQPDWQAPPRVRALVSTRNGGVSEPPYGAWGGDGGEVAGGMNLGRHTG
CCCCCCHHHHHCCCCCCCCHHHHHEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
DDPAHVEANRARLLALAGQSRAAWLEQVHGTEVVRAEDVLAAGEGGAVRADASVAATPGA
CCCCEEECCCEEEEEECCCCHHHHHHHHCCCCEEEHHHHEECCCCCCEEECCCCCCCCCH
VCVVMVADCLPVLLCDDAGRAVGAAHAGWRGLVAGIVEKTAERVAALAGGGADRLHAYLG
HHHHHHHHHHHEEEECCCCCHHHCHHCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHC
PAIGPGAFEVGADVRSAFLDAAPLADYAATECAFAARAHAPGKYLANLYALARLRLARVG
CCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHC
VTRVSGGAACTATERERFYSYRRDRVTGRMAALIWLAD
CEEECCCEEECHHHHHHHHHHHHHHHHCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1906060; 9205837; 9278503; 2066329 [H]