| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452417
Identifier: 126452417
GI number: 126452417
Start: 3546493
End: 3547458
Strand: Direct
Name: 126452417
Synonym: BURPS1106A_3647
Alternate gene names: NA
Gene position: 3546493-3547458 (Clockwise)
Preceding gene: 126453820
Following gene: 126453276
Centisome position: 88.92
GC content: 58.49
Gene sequence:
>966_bases TTGAATCCTGGTTTAATTCGCCGCAATAATATTGTCCCGGCCTACGCGGAAGCAGGCCTGATTCTAAGTTCAAGCATTGC AAATTACAATCGATTCCATATTCCGGGGTTTTCTTTGATTGCCGTCGTTCTAGTCGCCTATTTCGCCGTCGCCGTGCTCG CTGCGGCGCTGCTGTTATTACCGGCAGTGCGCACGACGGTATTCGATTCGGTCGCCCAATTCCACGGCCGAATCAGCCGG CGCGCATCCGATCGCGCGGCCCGGGCGCGCGAGCATCTCGCGCAATCGGCAAGAATGTCGCGCTCCACTTTAAGCGGCGT GCAAAATTTACTAGTTCGGCGGCGCTTGCTGATTGCGACCACGACAGGTATTCTTGCGACGCCTCCATTGATTGCTATCG CGTTACGCGGTCGGCAACTATTCCAATACGACGACACATTGCGTGTCCCGGACGAGAAAATCGCCGCGCTTTTAAAAGGC GAGCAGCTCGTCCCGCCGCTGCCGCTGCCGCCCGAAGTCTTCGCCACGCGCGAGGTCGAGCAGGTCAGGCCCGCGCTGAA GGACGCAAGCCGCGATTGGAATTTGCTCGATACCGATTTCAGAACGCGCCTGTTGCTCGTCTACAAGATCATGCGCGAGC AGCACGGCTATGAAATGGCGCTGCTCGAAGGCTATCGCAGCCCCGAGCGGCAAAACCGATTGGCGCAGATGGGCAGCAAC GTCACCAATGCGGCGGCGTTCCAGAGTTATCACCAATACGGACTGGCGGCCGACAACGCGTTCCTGCGCGACGGCAAGCT CGTCATCTCGGAAAAAGATCCGTGGGCCATGCGAGGCTATCAGTTGTACGGACAAGTCGCCGAAGAGGTCGGCTTGACCT GGGGTGGCCGATGGAAAATGATGGACCTCGGACACGTCGAATACCATAAGCCCGGCTTCAAGCTCGGGCGCTCGTCCGCG CGATAA
Upstream 100 bases:
>100_bases CGCGAGTGGTTTGCGCCGCTCCCTTTGCCGGCATCGGAGGAAAGCAGGCTAGGCGGGGCTTTCGAATTCGAATCGTCCGG CGCGCTCATTCAGTGTCTCG
Downstream 100 bases:
>100_bases AGGACGAGCAGTAAATAATGAGGGCGGTATGGGGCTACCAGACATCGCGACGGGATCACAATCCGGCATTCACTCGATCG GCGCGCGCGGCTCAGCGAGC
Product: D-alanyl-D-alanine carboxypeptidase family protein
Products: NA
Alternate protein names: D-Alanyl-D-Alanine Carboxypeptidase Family; Transmembrane Protein; LysM Domain-Containing Protein; Subfamily; D-Alanyl-D-Alanine Carboxypeptidase Family Protein
Number of amino acids: Translated: 321; Mature: 321
Protein sequence:
>321_residues MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLLPAVRTTVFDSVAQFHGRISR RASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKG EQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPGFKLGRSSA R
Sequences:
>Translated_321_residues MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLLPAVRTTVFDSVAQFHGRISR RASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKG EQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPGFKLGRSSA R >Mature_321_residues MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLLPAVRTTVFDSVAQFHGRISR RASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIATTTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKG EQLVPPLPLPPEVFATREVEQVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKMMDLGHVEYHKPGFKLGRSSA R
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35907; Mature: 35907
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLL CCCCCEECCCCCCHHHHCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH PAVRTTVFDSVAQFHGRISRRASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKGEQLVPPLPLPPEVFATREVE CCCHHHCCHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH QVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCHHHHHHHHHHCCC VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKM CHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEE MDLGHVEYHKPGFKLGRSSAR EECCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MNPGLIRRNNIVPAYAEAGLILSSSIANYNRFHIPGFSLIAVVLVAYFAVAVLAAALLLL CCCCCEECCCCCCHHHHCCHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHH PAVRTTVFDSVAQFHGRISRRASDRAARAREHLAQSARMSRSTLSGVQNLLVRRRLLIAT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TTGILATPPLIAIALRGRQLFQYDDTLRVPDEKIAALLKGEQLVPPLPLPPEVFATREVE CCCHHHCCHHHHHHHCCCHHCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHHHHHHH QVRPALKDASRDWNLLDTDFRTRLLLVYKIMREQHGYEMALLEGYRSPERQNRLAQMGSN HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEHHHHHCCCHHHHHHHHHHCCC VTNAAAFQSYHQYGLAADNAFLRDGKLVISEKDPWAMRGYQLYGQVAEEVGLTWGGRWKM CHHHHHHHHHHHHCCCCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCEEE MDLGHVEYHKPGFKLGRSSAR EECCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA