| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452405
Identifier: 126452405
GI number: 126452405
Start: 1385234
End: 1386022
Strand: Direct
Name: 126452405
Synonym: BURPS1106A_1410
Alternate gene names: NA
Gene position: 1385234-1386022 (Clockwise)
Preceding gene: 126455105
Following gene: 126451863
Centisome position: 34.73
GC content: 71.1
Gene sequence:
>789_bases TTGAACCAGCCAGCCCGTTCGCCTGCCGTCGCAGGCATGCTCAACAAAGTCCCGGAAGTCACGCTCGCGTTCTGGATCGT CAAGATCATGTCGACGACGGTCGGGGAGACCGGCGCCGATTATCTCGCCGTCCACGTGGGGCTCGGCGCCGCCGTCACGG GCGCGCTGACGGCCTGCCTGCTGGTCGGCGCGCTCGCGCTGCAATGGCGCGCGCGCGCCTATGTGCCATGGATCTACTGG CTGAATATCGTCCTCGTCAGCGTCGCCGGTACGCAGATCACCGACGCGCTCACCGACGGTCTCGGCGTCAGCCTCCACGT CAGCACGCCGCTTTTCGCCGCCGCGCTCGCGGCGACGTTCGCGCTCTGGTATCGCAGCGAGCGCACGCTGTCGATCCATA CGATCGTCACGCCGCGCCGCGAGGGGTTCTACTGGGCCGCGATCCTGCTGACGTTCGCGCTCGGCACGGCGGCGGGCGAT CTCGCGACCGAGGCGCTCGGCCTCGGATTCCGGCTCGGGATCGTCGCGTTCGGCGGCGCGATCGCGCTCGTCGCGGCGGC CGCGCTCGGCGGGATGAACCGCGTGCTCGCGTTCTGGCTCGCGTACATCCTCACGCGCCCGCTCGGCGCGTCGCTCGGTG ATTTCCTGTCGCAGGCGCAAGCGTACGGCGGCCTCGGGCTCGGCACGATCAGGACGAGCGCCGTGTTTCTCGCGGTGATC GTTGCGCTCGTCGCGGGGCTGAGTGTCGCCGCCGCGCGCGCGGGCCGGCTCGGCGCGCGCGGGCGCTGA
Upstream 100 bases:
>100_bases GGCGTCCGAGCGAGTCGCAGGAGCGTTCGTCATGTGTCGCGCGCCGCCGTTGCCGGCATCCGGCTCGCTCTTCGCAACCG CCGCGACAAGGAGAGTCCGA
Downstream 100 bases:
>100_bases GGTCTTGCCGTCGCGGCTGCCGCTGACGTTGCTGTTGCTGTTGCTGCTGTTGACGTTGACGTTGACGTTGACGTTGACGC AAACCGGAGGCGGCGTCGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MNQPARSPAVAGMLNKVPEVTLAFWIVKIMSTTVGETGADYLAVHVGLGAAVTGALTACLLVGALALQWRARAYVPWIYW LNIVLVSVAGTQITDALTDGLGVSLHVSTPLFAAALAATFALWYRSERTLSIHTIVTPRREGFYWAAILLTFALGTAAGD LATEALGLGFRLGIVAFGGAIALVAAAALGGMNRVLAFWLAYILTRPLGASLGDFLSQAQAYGGLGLGTIRTSAVFLAVI VALVAGLSVAAARAGRLGARGR
Sequences:
>Translated_262_residues MNQPARSPAVAGMLNKVPEVTLAFWIVKIMSTTVGETGADYLAVHVGLGAAVTGALTACLLVGALALQWRARAYVPWIYW LNIVLVSVAGTQITDALTDGLGVSLHVSTPLFAAALAATFALWYRSERTLSIHTIVTPRREGFYWAAILLTFALGTAAGD LATEALGLGFRLGIVAFGGAIALVAAAALGGMNRVLAFWLAYILTRPLGASLGDFLSQAQAYGGLGLGTIRTSAVFLAVI VALVAGLSVAAARAGRLGARGR >Mature_262_residues MNQPARSPAVAGMLNKVPEVTLAFWIVKIMSTTVGETGADYLAVHVGLGAAVTGALTACLLVGALALQWRARAYVPWIYW LNIVLVSVAGTQITDALTDGLGVSLHVSTPLFAAALAATFALWYRSERTLSIHTIVTPRREGFYWAAILLTFALGTAAGD LATEALGLGFRLGIVAFGGAIALVAAAALGGMNRVLAFWLAYILTRPLGASLGDFLSQAQAYGGLGLGTIRTSAVFLAVI VALVAGLSVAAARAGRLGARGR
Specific function: Unknown
COG id: COG4705
COG function: function code S; Uncharacterized membrane-anchored protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27081; Mature: 27081
Theoretical pI: Translated: 10.33; Mature: 10.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQPARSPAVAGMLNKVPEVTLAFWIVKIMSTTVGETGADYLAVHVGLGAAVTGALTACL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHH LVGALALQWRARAYVPWIYWLNIVLVSVAGTQITDALTDGLGVSLHVSTPLFAAALAATF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHH ALWYRSERTLSIHTIVTPRREGFYWAAILLTFALGTAAGDLATEALGLGFRLGIVAFGGA HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALVAAAALGGMNRVLAFWLAYILTRPLGASLGDFLSQAQAYGGLGLGTIRTSAVFLAVI HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VALVAGLSVAAARAGRLGARGR HHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNQPARSPAVAGMLNKVPEVTLAFWIVKIMSTTVGETGADYLAVHVGLGAAVTGALTACL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCCHHHHHHHHHHHH LVGALALQWRARAYVPWIYWLNIVLVSVAGTQITDALTDGLGVSLHVSTPLFAAALAATF HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCCEEEEECCHHHHHHHHHHH ALWYRSERTLSIHTIVTPRREGFYWAAILLTFALGTAAGDLATEALGLGFRLGIVAFGGA HHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IALVAAAALGGMNRVLAFWLAYILTRPLGASLGDFLSQAQAYGGLGLGTIRTSAVFLAVI HHHHHHHHHCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH VALVAGLSVAAARAGRLGARGR HHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA