| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452373
Identifier: 126452373
GI number: 126452373
Start: 1711961
End: 1712683
Strand: Reverse
Name: 126452373
Synonym: BURPS1106A_1753
Alternate gene names: NA
Gene position: 1712683-1711961 (Counterclockwise)
Preceding gene: 126453697
Following gene: 126453298
Centisome position: 42.94
GC content: 65.7
Gene sequence:
>723_bases TTGATCCTGTTCAACTCATTTGGACTTCTCTTCGTCGTTTTCCTGCTCTGCCGCAAACCGCGCGGCGCGTTCGCGATACT CGCGGCCGGCGCCGCACTCCTGTGGCTGATCGCTTCCGGATGGCTTGCCGCGCCACTCGTCGCGCTCGCGCAAGCCGGCA TGCAACCGGTCGCGCATCCGACGATGACGGGCGACACCGTGATCGTGATGCTCGGCGCGGGCATCGAACGCCGCGACGGC GTCGCGATACCGCCACGCGACGCACTCGCCCGCATCGACAAAACGGCCGAACTCTATTCGGCATGCCGACGAACGGCGCA GCGCTGCACGGTCGTCGTGTCGGGCGGCGACCCGCAGGTGCGCGGCATCGCGGAAGCGGACACCTATGCGCCCTATCTGC TCGCGCGAGGCGTCGCGAGCGCCGACCTGATCCGCGAGAAGCGCAGCCACACCACCTATGAAAACGCGCGCTTCACTGCT CCCATATTACGCGCCCAACATTACGATGATCTGATTCTCGTCACCTCGTCATATCAGATGAAACGCGCGCTCCTCGATTT CGAGCGGTTCGGATTCGCGCCGCAGCCCGTCTACGCGAACCGCAGGGACGCCCGGCTCGGCTGGCTGCCGCGCGCGGCCA ATCTCGCCAACGCCGAGCTGGCGCTGCACGAAATCGTCGGCGTCGCGCAATTTCATGTGTACCGCCGCCTCGGCTGGTTC TAG
Upstream 100 bases:
>100_bases ATCCCTCCACTCCTTCCGACCCGCGCCGTGACGCTTCGTTCTCGCCTCACGGGGACAGATCATTAACCGCTCCACAAAAA GCTACCTTACCCCAATCAAA
Downstream 100 bases:
>100_bases CCGCACCGCTTCGCCCGCGCCGGATCGTCGCGGCGCCGATGCCGCCGGCGCGTTGCGGTCGCGCAAATGGCGCAGCAACG ACGGATTGCGCCACTGTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 240; Mature: 240
Protein sequence:
>240_residues MILFNSFGLLFVVFLLCRKPRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHPTMTGDTVIVMLGAGIERRDG VAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTA PILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF
Sequences:
>Translated_240_residues MILFNSFGLLFVVFLLCRKPRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHPTMTGDTVIVMLGAGIERRDG VAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTA PILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF >Mature_240_residues MILFNSFGLLFVVFLLCRKPRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHPTMTGDTVIVMLGAGIERRDG VAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQVRGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTA PILRAQHYDDLILVTSSYQMKRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF
Specific function: Unknown
COG id: COG1434
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26379; Mature: 26379
Theoretical pI: Translated: 9.99; Mature: 9.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MILFNSFGLLFVVFLLCRKPRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHP CEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC TMTGDTVIVMLGAGIERRDGVAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQV CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC RGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVTSSYQM CEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCEEEEECCHHH KRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MILFNSFGLLFVVFLLCRKPRGAFAILAAGAALLWLIASGWLAAPLVALAQAGMQPVAHP CEEECHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCC TMTGDTVIVMLGAGIERRDGVAIPPRDALARIDKTAELYSACRRTAQRCTVVVSGGDPQV CCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCC RGIAEADTYAPYLLARGVASADLIREKRSHTTYENARFTAPILRAQHYDDLILVTSSYQM CEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCEEHHHHHHHCCCCCEEEEECCHHH KRALLDFERFGFAPQPVYANRRDARLGWLPRAANLANAELALHEIVGVAQFHVYRRLGWF HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA