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The map label for this gene is dcyD [H]

Identifier: 126452372

GI number: 126452372

Start: 2989200

End: 2990219

Strand: Direct

Name: dcyD [H]

Synonym: BURPS1106A_3059

Alternate gene names: 126452372

Gene position: 2989200-2990219 (Clockwise)

Preceding gene: 126455064

Following gene: 126453198

Centisome position: 74.95

GC content: 71.57

Gene sequence:

>1020_bases
ATGAACACGACGACGCTCTCGACGAAACTGAACGCCTTCGCCCGCCTGAACCTGATCGACGCGCCGACGCCGCTGCAGTA
CTTGCCGCGCCTGTCCGCGCACGTCGGCCGCGACATCCACGTGAAGCGCGACGACTGCACGCCGCTCGCGATGGGCGGTA
ACAAGCTGCGCAAGCTCGAATTCCTCGCCGCGGACGCGCTCGGCCAAAACGCGGACGTGCTGGTGACCGCGGGCGCGATC
CAGTCGAATCACGTCCGGCAGACGGCCGCGCTCGCCGCGCAGCTCGGCCTCGGCTGTGTCGCGCTGCTCGAAAACCCGAT
CGCAGCCGCGCGCGACGATTATCTGCAAAGCGGCAACCGGCTGCTGCTCGATCTGTTCGACGTGCGCGCGCACGTCGTCG
ACGGGCTCGACGACGTCGACCGGCAACTCGAAGCCGCCGCGCGGCGGCTGCGCGACGAAGGGCGGCGCCCGTACGTGATC
CCGATCGGCGGATCGAATCCGCTCGGCGCGCTCGGCTACGTGCGCGCGGGCCTCGAGCTCGCGCAGCAGATCCGCGCGGC
CGAGCGCGATTTCGCGGCTGTCGTGCTCGCGTCCGGCAGCGCCGGCACGCACGCGGGCCTCGCGTTCGCGCTCGCGCACG
CGTTGCCCGGGCTGCCGGTGATCGGCGTGACGGTATCGCGCACCGACGCGCAGCAGCGCCCGAAGGTGCGGCATCTGCTC
GACGGCATGAGCGGGCTGCTCGACGTCGCGTTGCCGGCGGGCGCACGCATCGATCTGTGGGACGACTACTTCGCGCCGCG
CTACGGCGAGCCCAATCGCGCGGGCATCGACGCGCTGCGGCTGCTCGCGCGAACCGAGGGGCTGCTGCTCGATCCGGTGT
ACACGGGCAAGGCGATGGCGGGTCTCATCGACGGCGTCGCGCGCGGCCGCTTCGACGGAAACGGCCCGGTGCTGTTCGTG
CATACGGGCGGCGCGCCCGCGCTGTTCGCGTATCAGGACGCGTGCCGCGCGAGCCGATGA

Upstream 100 bases:

>100_bases
CGCGAATTTCTCGACAAGATCCTGCACTGAGCCGCGCCGCGCGCGCCGTTCGTCGCGCGCCGCCGCCCGGCAGCCGCCCC
GCCCCGATTCCCTCCTCGAC

Downstream 100 bases:

>100_bases
CGCGCGGCGAACGGCCCGCGCGGCCAGGCGTTCGCGCGCGCCGCATCCGAGCGCGTGGCCGGCGGCGCACCGTGCGCATG
CCGCCGGTGACGCAAACCGA

Product: D-cysteine desulfhydrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MNTTTLSTKLNAFARLNLIDAPTPLQYLPRLSAHVGRDIHVKRDDCTPLAMGGNKLRKLEFLAADALGQNADVLVTAGAI
QSNHVRQTAALAAQLGLGCVALLENPIAAARDDYLQSGNRLLLDLFDVRAHVVDGLDDVDRQLEAAARRLRDEGRRPYVI
PIGGSNPLGALGYVRAGLELAQQIRAAERDFAAVVLASGSAGTHAGLAFALAHALPGLPVIGVTVSRTDAQQRPKVRHLL
DGMSGLLDVALPAGARIDLWDDYFAPRYGEPNRAGIDALRLLARTEGLLLDPVYTGKAMAGLIDGVARGRFDGNGPVLFV
HTGGAPALFAYQDACRASR

Sequences:

>Translated_339_residues
MNTTTLSTKLNAFARLNLIDAPTPLQYLPRLSAHVGRDIHVKRDDCTPLAMGGNKLRKLEFLAADALGQNADVLVTAGAI
QSNHVRQTAALAAQLGLGCVALLENPIAAARDDYLQSGNRLLLDLFDVRAHVVDGLDDVDRQLEAAARRLRDEGRRPYVI
PIGGSNPLGALGYVRAGLELAQQIRAAERDFAAVVLASGSAGTHAGLAFALAHALPGLPVIGVTVSRTDAQQRPKVRHLL
DGMSGLLDVALPAGARIDLWDDYFAPRYGEPNRAGIDALRLLARTEGLLLDPVYTGKAMAGLIDGVARGRFDGNGPVLFV
HTGGAPALFAYQDACRASR
>Mature_339_residues
MNTTTLSTKLNAFARLNLIDAPTPLQYLPRLSAHVGRDIHVKRDDCTPLAMGGNKLRKLEFLAADALGQNADVLVTAGAI
QSNHVRQTAALAAQLGLGCVALLENPIAAARDDYLQSGNRLLLDLFDVRAHVVDGLDDVDRQLEAAARRLRDEGRRPYVI
PIGGSNPLGALGYVRAGLELAQQIRAAERDFAAVVLASGSAGTHAGLAFALAHALPGLPVIGVTVSRTDAQQRPKVRHLL
DGMSGLLDVALPAGARIDLWDDYFAPRYGEPNRAGIDALRLLARTEGLLLDPVYTGKAMAGLIDGVARGRFDGNGPVLFV
HTGGAPALFAYQDACRASR

Specific function: Catalyzes the alpha,beta-elimination reaction of D- cysteine and of several D-cysteine derivatives. It could be a defense mechanism against D-cysteine [H]

COG id: COG2515

COG function: function code E; 1-aminocyclopropane-1-carboxylate deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ACC deaminase/D-cysteine desulfhydrase family [H]

Homologues:

Organism=Escherichia coli, GI87082000, Length=324, Percent_Identity=63.5802469135803, Blast_Score=408, Evalue=1e-115,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005966
- InterPro:   IPR001926 [H]

Pfam domain/function: PF00291 PALP [H]

EC number: =4.4.1.15 [H]

Molecular weight: Translated: 35981; Mature: 35981

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNTTTLSTKLNAFARLNLIDAPTPLQYLPRLSAHVGRDIHVKRDDCTPLAMGGNKLRKLE
CCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEECCCCHHHHHH
FLAADALGQNADVLVTAGAIQSNHVRQTAALAAQLGLGCVALLENPIAAARDDYLQSGNR
HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCE
LLLDLFDVRAHVVDGLDDVDRQLEAAARRLRDEGRRPYVIPIGGSNPLGALGYVRAGLEL
EEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH
AQQIRAAERDFAAVVLASGSAGTHAGLAFALAHALPGLPVIGVTVSRTDAQQRPKVRHLL
HHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHCHHHHHHH
DGMSGLLDVALPAGARIDLWDDYFAPRYGEPNRAGIDALRLLARTEGLLLDPVYTGKAMA
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHH
GLIDGVARGRFDGNGPVLFVHTGGAPALFAYQDACRASR
HHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHCCCC
>Mature Secondary Structure
MNTTTLSTKLNAFARLNLIDAPTPLQYLPRLSAHVGRDIHVKRDDCTPLAMGGNKLRKLE
CCCCCHHHHHHHHEEEEEECCCCCHHHHHHHHHHCCCCEEEECCCCCEEECCCCHHHHHH
FLAADALGQNADVLVTAGAIQSNHVRQTAALAAQLGLGCVALLENPIAAARDDYLQSGNR
HHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCHHHHHHHCCHHHHHHHHHHCCCE
LLLDLFDVRAHVVDGLDDVDRQLEAAARRLRDEGRRPYVIPIGGSNPLGALGYVRAGLEL
EEEHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH
AQQIRAAERDFAAVVLASGSAGTHAGLAFALAHALPGLPVIGVTVSRTDAQQRPKVRHLL
HHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEEECCCHHHCHHHHHHH
DGMSGLLDVALPAGARIDLWDDYFAPRYGEPNRAGIDALRLLARTEGLLLDPVYTGKAMA
HHHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEECCCCCCHHHH
GLIDGVARGRFDGNGPVLFVHTGGAPALFAYQDACRASR
HHHHHHHHCCCCCCCCEEEEECCCCCEEEHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA