| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452355
Identifier: 126452355
GI number: 126452355
Start: 3084073
End: 3085326
Strand: Reverse
Name: 126452355
Synonym: BURPS1106A_3169
Alternate gene names: NA
Gene position: 3085326-3084073 (Counterclockwise)
Preceding gene: 126453208
Following gene: 126452321
Centisome position: 77.36
GC content: 66.19
Gene sequence:
>1254_bases ATGTATTGGAGAAAATCGCTGGCTGCTGCCTTGTTGGCTCCCGTCCTGACCGCCTGCGGCGGCGGAGACGATCCGCCGCC CGCGCCCGTCGTGCGGCTGTGTCCGAAGACGATCGACTACAACACCGTGTTCACCGGCGGTTCCGGCTCGGGCGAGCTGG TTCGCGTGCAGCTCGACACGACGAAGATGACGTTCCAGATCACGTATCTCGCGTCGCCGGTGCCGGCGACGACGGGCACC GTGCAGCCCACCCGCGACGCGGCGCCGAACAATGTCGTGACGGGAACGCTGACGGACGAGACGGGCCTGCCGACCGAGAA GCTCAACCAGTGCACGTTCCGGCTGAACAACGCGAGCCTCGATCCGAACCGTCCGGCGCGCGTGTTCCTCGGCGAGGGCG TGCTCGGCGGCGCGATTCCCGGCGCGACGATCCAGTTCGGCGGCGTGATCGGCGTCGGGCAGATTCCGAAGACGACGTTT CCGTACTATCCGTTCATCAGTTTCTCCGATCAGGAGACCGATCTCTCGAAGATCGCGGGCAACTACAACCAGCTCGGCTA TCACCAGGTGCCGTCGCAGAACTTCGCTCAGGCGGCGGTCGACGCGAAGGTCACGATCAACGCGGACGGCACGTACGTCG AGACGGACAATTTCGGCAGGAAGAACGGCGGCCAGCCGCTCGCCTCGAGCGCGACGGTCAATCAGAAACTGACGTTGCGC GCCGACGCGCCCGTGTTCCAGTCGCTCAACTATCAGCCTCAGGTCCCGCCGACGCTCGCCTCGCTCGATCCGTCGAAGGC GGGCAAGGGCATCCTGATCGTGGGCAAGCTGCGCAATCAGCTGGTGCCGATCTTCATCCGCACCGGCGCGGCGAACGCGG ACCTGACGCAAGGCGCGCCTGTCGCGGACGACGAATCGGGGATCTCGATCCTGAGCCCGCAGACGGCGATCGCCTCGGGC TCGCAGGACGGCGAGTACACGGGCGTCGACAGCGTGCTCGATTACCGCGCGACCGCGCTCGTCGGCGCGCAGGCGACGCT GCTCGATCCGTTCCACGCATCGCAGGTCGCGCTCACGCGCTCGCTCAATCTCGACTATACGCAGGCCGTGCCGGGCGTCG TGACGACGGTTCAGACCAATGCGGCGTCGGGGCCACCCACCGGCAAGTTCGTCTTCACGGGCGGCGTATTCGGCTTGCTC GACATGAGCGACGTCAACAACCCGTACTTCACGGTGGGCGCGTTCGTGCAATGA
Upstream 100 bases:
>100_bases AGTACAACCCGTTCTTCACGGTCGGCGCTTTCGTTCAGTAACGCATGACTTCGCGGCGGCGCCGGACGCCGCCGCGGACT TCAAGATATCGAGGATTCCT
Downstream 100 bases:
>100_bases GCGGCGCGCAGAACAGGAGACACACGGCGATGCGCGGCCCGCGCGCGCATCGCGCGATCGAAGTATCAGGAGACCTCATG AAGAAGCTGATTGCCGCGTG
Product: putative lipoprotein
Products: NA
Alternate protein names: Large Exoprotein Involved In Heme Utilization Or Adhesion
Number of amino acids: Translated: 417; Mature: 417
Protein sequence:
>417_residues MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDTTKMTFQITYLASPVPATTGT VQPTRDAAPNNVVTGTLTDETGLPTEKLNQCTFRLNNASLDPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTF PYYPFISFSDQETDLSKIAGNYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAPVADDESGISILSPQTAIASG SQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTRSLNLDYTQAVPGVVTTVQTNAASGPPTGKFVFTGGVFGLL DMSDVNNPYFTVGAFVQ
Sequences:
>Translated_417_residues MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDTTKMTFQITYLASPVPATTGT VQPTRDAAPNNVVTGTLTDETGLPTEKLNQCTFRLNNASLDPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTF PYYPFISFSDQETDLSKIAGNYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAPVADDESGISILSPQTAIASG SQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTRSLNLDYTQAVPGVVTTVQTNAASGPPTGKFVFTGGVFGLL DMSDVNNPYFTVGAFVQ >Mature_417_residues MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDTTKMTFQITYLASPVPATTGT VQPTRDAAPNNVVTGTLTDETGLPTEKLNQCTFRLNNASLDPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTF PYYPFISFSDQETDLSKIAGNYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAPVADDESGISILSPQTAIASG SQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTRSLNLDYTQAVPGVVTTVQTNAASGPPTGKFVFTGGVFGLL DMSDVNNPYFTVGAFVQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43605; Mature: 43605
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDT CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCEEEEEEEC TKMTFQITYLASPVPATTGTVQPTRDAAPNNVVTGTLTDETGLPTEKLNQCTFRLNNASL EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEEEECCCCC DPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTFPYYPFISFSDQETDLSKIAG CCCCCEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCEEECCCCCHHHHHHCC NYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR CCCCCCCEECCCCHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEE ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAP ECCHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCC VADDESGISILSPQTAIASGSQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTR CCCCCCCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHEECCCEEEECCCCCCCEEEEE SLNLDYTQAVPGVVTTVQTNAASGPPTGKFVFTGGVFGLLDMSDVNNPYFTVGAFVQ ECCCCHHHHCCCEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEC >Mature Secondary Structure MYWRKSLAAALLAPVLTACGGGDDPPPAPVVRLCPKTIDYNTVFTGGSGSGELVRVQLDT CCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCCCCCCCEEEECCCCCCCEEEEEEEC TKMTFQITYLASPVPATTGTVQPTRDAAPNNVVTGTLTDETGLPTEKLNQCTFRLNNASL EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHCCEEEEECCCCC DPNRPARVFLGEGVLGGAIPGATIQFGGVIGVGQIPKTTFPYYPFISFSDQETDLSKIAG CCCCCEEEEEECCCCCCCCCCCEEEECCEEECCCCCCCCCCCCCEEECCCCCHHHHHHCC NYNQLGYHQVPSQNFAQAAVDAKVTINADGTYVETDNFGRKNGGQPLASSATVNQKLTLR CCCCCCCEECCCCHHHHHHCCEEEEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEE ADAPVFQSLNYQPQVPPTLASLDPSKAGKGILIVGKLRNQLVPIFIRTGAANADLTQGAP ECCHHHHCCCCCCCCCCHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCCC VADDESGISILSPQTAIASGSQDGEYTGVDSVLDYRATALVGAQATLLDPFHASQVALTR CCCCCCCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHEECCCEEEECCCCCCCEEEEE SLNLDYTQAVPGVVTTVQTNAASGPPTGKFVFTGGVFGLLDMSDVNNPYFTVGAFVQ ECCCCHHHHCCCEEEEEECCCCCCCCCCEEEEECCEEEEEECCCCCCCEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA