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The map label for this gene is hspC2 [H]

Identifier: 126452349

GI number: 126452349

Start: 3337360

End: 3337800

Strand: Reverse

Name: hspC2 [H]

Synonym: BURPS1106A_3424

Alternate gene names: 126452349

Gene position: 3337800-3337360 (Counterclockwise)

Preceding gene: 126451706

Following gene: 126451472

Centisome position: 83.69

GC content: 63.04

Gene sequence:

>441_bases
ATGAGCGAACTGTTTTTCGATACGGATCTGCTGGACGAATTCGACCGTCTGCAGAAACACATGGCCCACCTCTTCGCGGG
CTTTCCCGCGAGCCTGCGCGCGACGCGCGTGGGAGCCTTTCCTCCCGTCAACATAGGCAGCACCGATGAATCGGTCGAGA
TCGTCGCATTCGCGCCGGGACTCGCGCCCTCCGAGATCGACGTCTCGGTCGACAAAGGCTTGCTCACGATCGCAGGCGAG
CGAAAGCGCGTGGAAACGGACGCCCCGGATGACACCCGCATGTACGCGCACGAGCGTTTCGCGGGCGCATTCCGGCGCGT
GATCGAACTGCCGCAGGACGCGGATCCGAACAACGTGAGCGCACGTTATGCGAACGGCTGCCTGACGATTCGCGTCGGCA
AATCGGAAGCGTCGAAGCCGCGCGTGATCTCGGTGCAGTGA

Upstream 100 bases:

>100_bases
GTTTCGATTTGTGTGTCGGCGGGCTTGGCTCGCGGGCGGACGAACTGGAGCGCGTAGTCCGGTTCGCCCGCCGTGCCGGC
CCCGTAACCAGGAGCCAATC

Downstream 100 bases:

>100_bases
CGGCGGCGCGCGGTGCCATATGCAATGAGCGGGCGCACCCGCTCGACGAACCACGGAGGACCATCATGAGCGACAGGACT
GAACTGGCAACCCGAAACGA

Product: HSP20 family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 146; Mature: 145

Protein sequence:

>146_residues
MSELFFDTDLLDEFDRLQKHMAHLFAGFPASLRATRVGAFPPVNIGSTDESVEIVAFAPGLAPSEIDVSVDKGLLTIAGE
RKRVETDAPDDTRMYAHERFAGAFRRVIELPQDADPNNVSARYANGCLTIRVGKSEASKPRVISVQ

Sequences:

>Translated_146_residues
MSELFFDTDLLDEFDRLQKHMAHLFAGFPASLRATRVGAFPPVNIGSTDESVEIVAFAPGLAPSEIDVSVDKGLLTIAGE
RKRVETDAPDDTRMYAHERFAGAFRRVIELPQDADPNNVSARYANGCLTIRVGKSEASKPRVISVQ
>Mature_145_residues
SELFFDTDLLDEFDRLQKHMAHLFAGFPASLRATRVGAFPPVNIGSTDESVEIVAFAPGLAPSEIDVSVDKGLLTIAGER
KRVETDAPDDTRMYAHERFAGAFRRVIELPQDADPNNVSARYANGCLTIRVGKSEASKPRVISVQ

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 16006; Mature: 15875

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSELFFDTDLLDEFDRLQKHMAHLFAGFPASLRATRVGAFPPVNIGSTDESVEIVAFAPG
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCEEEEEECCC
LAPSEIDVSVDKGLLTIAGERKRVETDAPDDTRMYAHERFAGAFRRVIELPQDADPNNVS
CCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ARYANGCLTIRVGKSEASKPRVISVQ
EEECCCEEEEEECCCCCCCCEEEEEC
>Mature Secondary Structure 
SELFFDTDLLDEFDRLQKHMAHLFAGFPASLRATRVGAFPPVNIGSTDESVEIVAFAPG
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHEEECCCCCCCCCCCCCCCEEEEEECCC
LAPSEIDVSVDKGLLTIAGERKRVETDAPDDTRMYAHERFAGAFRRVIELPQDADPNNVS
CCCCCEEEEECCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
ARYANGCLTIRVGKSEASKPRVISVQ
EEECCCEEEEEECCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA