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The map label for this gene is recJ [H]

Identifier: 126452335

GI number: 126452335

Start: 2603284

End: 2604978

Strand: Direct

Name: recJ [H]

Synonym: BURPS1106A_2642

Alternate gene names: 126452335

Gene position: 2603284-2604978 (Clockwise)

Preceding gene: 126452154

Following gene: 226830773

Centisome position: 65.27

GC content: 71.8

Gene sequence:

>1695_bases
ATGACCCGCATCGTCACCCGCTCCGCCGTTCCCGCCGCGCTCGACGCGCTCGCCCGCCACGGGCTGCATCCCGTGCTCGC
CCGCCTCTACGCGGCGCGCGGAATCGCCTCGCCCGCCGACGTCGAAACCGCGCTGTCGCGCCTCGTGCCGCCCGCGCAGC
TCAAGGGCTGCGCGCAGGCCGCCGCGCTCCTCGCCGATGCGCTCGAGGCCGGCCGCAAGATGCTCGTCGTCGCCGATTAC
GACTGCGACGGCGCGACCGCCTGCGCGGTTGCCGTGCGCGGCCTGCGGATGTTCGGCGCGAAGATCGATTACCTCGTGCC
GAACCGCTTCGAATACGGCTACGGGCTCACGCCCGAGATCGTCGAGCTCGCGGCCGCGAGAAAGCCCGACCTGCTGATCA
CGGTCGACAACGGAATCGCGAGCGTCGACGGCGTCGCGGCCGCGAACGCGCGCGGCATCGACGTGCTCGTCACCGATCAC
CATCTGCCCGGCGACACGCTGCCCGCCGCGCGCGCGATCGTCAATCCGAACCAGCCCGGCTGCGCGTTCCCGAGCAAGCA
TATCGCGGGCGTCGGCGTGATGTTCTACGTGCTGCTCGCGCTGCGCGCCGAGCTGCGCGCGCGCGGCGCGTTCGGCGACG
CCCGCCCCGAGCCGCGGCTCGACGGGCTGCTCGATCTCGTCGCGCTCGGCACGGTGGCCGACGTCGTGCGGCTCGACGGC
AACAACCGCGTGCTCGTTGCGCAAGGCCTGCAGCGCATCCGCAACGGACGGATGCAGCCCGGCATCGCCGCGCTCTTTCG
CGCGGCCGCGCGCGACGCGCGCAGCGCATCGGGCTTCGATCTCGGCTTCGGCCTCGGCCCGCGCCTGAACGCGGCGGGCC
GCCTGTCGGACATGTCGCTCGGCATCGAATGCCTGACGACCGACGACGTGGGCCGCGCGTGGGAACTCGCGCAGCAGCTC
GACGCGATGAACCGCGAGCGGCGCGAGATCGAGGCCGGCATGCAGCAGCAGGCGCTCGCCGATCTCGCGTCGGTCGACCC
CGCCGAGGCGGCCACCATCACGCTCTTCAACCCCGAATGGCACCAGGGCGTGATCGGGATCGTCGCGGGGCGGCTCAAGG
AGCGCTTTCACCGGCCGGCGTTCACGTTCGCGCACGCGGACGACGGCGGCGCGCGCGTGAAGGGCTCCGGCCGCTCGATT
CCCGGCTTCCATCTGCGCGATGCGATCGACCTGATCTCGAAGCGCGAACCCGATCTGATCGTCACGTTCGGCGGCCACGC
GATGGCCGCGGGCGTCACGCTCGAGACCGCGAACGTGCCGCGCTTCGCGGCCGCGTTCGAGACGGTCGCGCGCGAATGGC
TGTCCGACGACGCGCTCGCGCGGGTGATCGAGACGGACGGCGATCTCGAGGATGCCTACTTCACGCCGCAGGTGGTCGAG
CTGCTCGATGCGGCCGTCTGGGGCCAGGGCTTCCCGGCGCCGCTCTTCTCGGGCGAATTCGACGTCGCCTCACAGGCGCT
CGTCAAGGACAAGCACCTGAAGCTGCAATTGACGCGCGGCCGCCAGCGCTTCAACGCGATCTGGTTCAATCACGCGGAGC
CGCTGCCCGCGCGCGCGACCCTCGCGTTCCGGCTCGCGAGCGATACGTGGAACGGCACGACGCGCGTGCAACTGATCGTC
GAGCACGCGGCGTAG

Upstream 100 bases:

>100_bases
CACGAGCGCCGCGACGCTCGCCGCGACGCGCGGCGATCTGCGCAAATTCTGGCGCCGCCGCGCGCTTGCCTCCCTGTTCG
AATAACGACAACCGCTTCGC

Downstream 100 bases:

>100_bases
CGCACGGGCGCGGGCGCGCGTCCGGTCGGGCGCGCCGACGCCGCTTACCGATCCGTCGCGAATTCCCGACGCGTCGAATT
CGCGCATCGCCGCCCGTTAT

Product: single-stranded-DNA-specific exonuclease RecJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 564; Mature: 563

Protein sequence:

>564_residues
MTRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQAAALLADALEAGRKMLVVADY
DCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDH
HLPGDTLPAARAIVNPNQPGCAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSLGIECLTTDDVGRAWELAQQL
DAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEWHQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSI
PGFHLRDAIDLISKREPDLIVTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARATLAFRLASDTWNGTTRVQLIV
EHAA

Sequences:

>Translated_564_residues
MTRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQAAALLADALEAGRKMLVVADY
DCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDH
HLPGDTLPAARAIVNPNQPGCAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSLGIECLTTDDVGRAWELAQQL
DAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEWHQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSI
PGFHLRDAIDLISKREPDLIVTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVE
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARATLAFRLASDTWNGTTRVQLIV
EHAA
>Mature_563_residues
TRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQAAALLADALEAGRKMLVVADYD
CDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEIVELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHH
LPGDTLPAARAIVNPNQPGCAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDGN
NRVLVAQGLQRIRNGRMQPGIAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSLGIECLTTDDVGRAWELAQQLD
AMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEWHQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSIP
GFHLRDAIDLISKREPDLIVTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVEL
LDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARATLAFRLASDTWNGTTRVQLIVE
HAA

Specific function: Single-stranded-DNA-specific exonuclease. Required for many types of recombinational events, although the stringency of the requirement for recJ appears to vary with the type of recombinational event monitored and the other recombination gene products whi

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the recJ family [H]

Homologues:

Organism=Escherichia coli, GI1789259, Length=554, Percent_Identity=48.5559566787004, Blast_Score=493, Evalue=1e-140,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008279
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR004610 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: 3.1.-.- [C]

Molecular weight: Translated: 60282; Mature: 60150

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQA
CCCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEI
HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHH
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCC
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSL
CCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIECLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH
HQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSIPGFHLRDAIDLISKREPDLI
HCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEE
VTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVE
EEECCCEEEECEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHH
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARAT
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHEEEECCCCCCCCCEE
LAFRLASDTWNGTTRVQLIVEHAA
EEEEEECCCCCCCEEEEEEEECCC
>Mature Secondary Structure 
TRIVTRSAVPAALDALARHGLHPVLARLYAARGIASPADVETALSRLVPPAQLKGCAQA
CCEECCCCHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHH
AALLADALEAGRKMLVVADYDCDGATACAVAVRGLRMFGAKIDYLVPNRFEYGYGLTPEI
HHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCCHHH
VELAAARKPDLLITVDNGIASVDGVAAANARGIDVLVTDHHLPGDTLPAARAIVNPNQPG
HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCHHHHHCCCCCCC
CAFPSKHIAGVGVMFYVLLALRAELRARGAFGDARPEPRLDGLLDLVALGTVADVVRLDG
CCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHEECC
NNRVLVAQGLQRIRNGRMQPGIAALFRAAARDARSASGFDLGFGLGPRLNAAGRLSDMSL
CCEEEHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GIECLTTDDVGRAWELAQQLDAMNRERREIEAGMQQQALADLASVDPAEAATITLFNPEW
CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCH
HQGVIGIVAGRLKERFHRPAFTFAHADDGGARVKGSGRSIPGFHLRDAIDLISKREPDLI
HCCHHHHHHHHHHHHHCCCCEEEEECCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCEE
VTFGGHAMAAGVTLETANVPRFAAAFETVAREWLSDDALARVIETDGDLEDAYFTPQVVE
EEECCCEEEECEEEECCCCCHHHHHHHHHHHHHHCHHHHHHHHHCCCCCCCCCCCHHHHH
LLDAAVWGQGFPAPLFSGEFDVASQALVKDKHLKLQLTRGRQRFNAIWFNHAEPLPARAT
HHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCCHHHHHEEEECCCCCCCCCEE
LAFRLASDTWNGTTRVQLIVEHAA
EEEEEECCCCCCCEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1987126; 9278503; 2649886 [H]