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The map label for this gene is rimP

Identifier: 126452322

GI number: 126452322

Start: 1719367

End: 1719828

Strand: Direct

Name: rimP

Synonym: BURPS1106A_1760

Alternate gene names: 126452322

Gene position: 1719367-1719828 (Clockwise)

Preceding gene: 126455204

Following gene: 126455004

Centisome position: 43.11

GC content: 60.82

Gene sequence:

>462_bases
GTGCAACTGACGGAACTGATAGAAACTACGGTCACGGGGCTCGGCTACGAGCTCGTCGATCTCGAGCGCACCGGGCGCGG
CATGGTCTGCGTCTACATCGATCAGCCCGCCGGCATCACGATCGACGATTGCGAGAAGGTCACGCGTCAGCTCCAGCACG
TACTGACGGTCGAAAACATCGATTACGAACGGCTCGAGGTCTCGTCACCGGGGCTCGACCGGCCGTTGAAGAAGCTGGCT
GACTTCACGCGTTTCGCGGGCAGCGAGGCCGTCATCACCCTGAAAAAGCCGTTGGACGGGCGCAAGACGTACCGGGGCAT
TCTGCACGCGCCGAACGGCGAGACGATCGGTTTGGAATTTGAGAGGAAGAAGGGCGAGGCGGCCATGCTGGATTTCACGC
TGGCGGACATCGACAAGGCCCGCCTGATTCCGCACGTTGACTTTAGGAGCCGCAAACAATGA

Upstream 100 bases:

>100_bases
GAAACGGTTGGGCATCTCGGGTAGCGCTTCCTGCGCCGGCTAAGGCGCGCGTTCAGCGGGTGAATCGCGAGGGGCGGGCG
CGGACACCTGAGAGGACACT

Downstream 100 bases:

>100_bases
GTCGCGAAGTGTTGATGTTGGTGGATGCGCTGGCGCGCGAGAAGAACGTCGACAAGGACGTCGTGCTGGGCGCGCTCGAA
GCGGCCCTCGCGTCGGCTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MQLTELIETTVTGLGYELVDLERTGRGMVCVYIDQPAGITIDDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLADIDKARLIPHVDFRSRKQ

Sequences:

>Translated_153_residues
MQLTELIETTVTGLGYELVDLERTGRGMVCVYIDQPAGITIDDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLADIDKARLIPHVDFRSRKQ
>Mature_153_residues
MQLTELIETTVTGLGYELVDLERTGRGMVCVYIDQPAGITIDDCEKVTRQLQHVLTVENIDYERLEVSSPGLDRPLKKLA
DFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETIGLEFERKKGEAAMLDFTLADIDKARLIPHVDFRSRKQ

Specific function: Required for maturation of 30S ribosomal subunits

COG id: COG0779

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rimP family

Homologues:

Organism=Escherichia coli, GI226510978, Length=149, Percent_Identity=40.2684563758389, Blast_Score=103, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RIMP_BURM7 (A3MJW2)

Other databases:

- EMBL:   CP000548
- RefSeq:   YP_001080548.1
- ProteinModelPortal:   A3MJW2
- SMR:   A3MJW2
- GeneID:   4893390
- GenomeReviews:   CP000548_GR
- KEGG:   bmn:BMA10247_0989
- TIGR:   BMA10247_0989
- HOGENOM:   HBG668072
- OMA:   MGYELVE
- ProtClustDB:   PRK00092
- BioCyc:   BMAL320389:BMA10247_0989-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_01077
- InterPro:   IPR003728

Pfam domain/function: PF02576 DUF150

EC number: NA

Molecular weight: Translated: 17232; Mature: 17232

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMVCVYIDQPAGITIDDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETIGLEF
CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCEEECCCCCEEEEEE
ERKKGEAAMLDFTLADIDKARLIPHVDFRSRKQ
ECCCCCEEEEEEEHHCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure
MQLTELIETTVTGLGYELVDLERTGRGMVCVYIDQPAGITIDDCEKVTRQLQHVLTVENI
CCHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCC
DYERLEVSSPGLDRPLKKLADFTRFAGSEAVITLKKPLDGRKTYRGILHAPNGETIGLEF
CCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHCCEEECCCCCEEEEEE
ERKKGEAAMLDFTLADIDKARLIPHVDFRSRKQ
ECCCCCEEEEEEEHHCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA