| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is gspG [H]
Identifier: 126452305
GI number: 126452305
Start: 14010
End: 14462
Strand: Direct
Name: gspG [H]
Synonym: BURPS1106A_0012
Alternate gene names: 126452305
Gene position: 14010-14462 (Clockwise)
Preceding gene: 126453917
Following gene: 126455158
Centisome position: 0.35
GC content: 62.47
Gene sequence:
>453_bases ATGCAAACGTGGATCACTCGCCGCTCTCAGGCAGCACGCCGTCAACGCGGCTTCACGCTGATCGAGATCATGGTCGTGGT GGCGATTCTCGGCATTCTCGCGGCGCTCATCGTGCCGAAGATCATGAGCCGTCCCGATGAAGCGCGCCGGATCGCGGCGA AGCAGGACATCGGCACGATCATGCAGGCGCTCAAGCTGTACCGCCTCGACAACGGCCGCTATCCGACCCAGGACCAGGGC CTGAACGCGTTGATCCAGAAGCCGACCACCGATCCGATCCCGAACAACTGGAAGGACGGCGGCTATCTCGAGCGCCTGCC GAACGATCCGTGGGGCAATTCGTACAAGTATCTGAACCCGGGCGTGCACGGCGAGATCGACGTGTTCAGCTACGGCGCCG ACGGCAAGGAAGGCGGCGAAAGCAACGATTCCGACATCGGCTCGTGGCAATGA
Upstream 100 bases:
>100_bases CGGAGCAAGTCGCGCCTTACAATGCGGCTTCACGCCGCGCGGCTCGCGCCGCGCGCGCCATTCACTCACCGCTCATTTTT TGAAGAAGAGGTAGTCACTC
Downstream 100 bases:
>100_bases GCCGCTGACGCCCCGCTCACGCGCGACGCACGCCTTGTTCTCGATGTACGCACGACCCGGCACGATTTTCGTTTGCGATA CGCGGCGTCACGCGGGGGCC
Product: general secretion pathway protein G
Products: NA
Alternate protein names: PilD-dependent protein pddA [H]
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MQTWITRRSQAARRQRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRYPTQDQG LNALIQKPTTDPIPNNWKDGGYLERLPNDPWGNSYKYLNPGVHGEIDVFSYGADGKEGGESNDSDIGSWQ
Sequences:
>Translated_150_residues MQTWITRRSQAARRQRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRYPTQDQG LNALIQKPTTDPIPNNWKDGGYLERLPNDPWGNSYKYLNPGVHGEIDVFSYGADGKEGGESNDSDIGSWQ >Mature_150_residues MQTWITRRSQAARRQRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTIMQALKLYRLDNGRYPTQDQG LNALIQKPTTDPIPNNWKDGGYLERLPNDPWGNSYKYLNPGVHGEIDVFSYGADGKEGGESNDSDIGSWQ
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of a variety of enzymes across the outer membrane [H]
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP G family [H]
Homologues:
Organism=Escherichia coli, GI1789725, Length=140, Percent_Identity=47.8571428571429, Blast_Score=125, Evalue=1e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000983 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR013545 - InterPro: IPR010054 [H]
Pfam domain/function: PF08334 GSPII_G; PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 16786; Mature: 16786
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTWITRRSQAARRQRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTI CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MQALKLYRLDNGRYPTQDQGLNALIQKPTTDPIPNNWKDGGYLERLPNDPWGNSYKYLNP HHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEECC GVHGEIDVFSYGADGKEGGESNDSDIGSWQ CCCCCEEEEEECCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MQTWITRRSQAARRQRGFTLIEIMVVVAILGILAALIVPKIMSRPDEARRIAAKQDIGTI CCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH MQALKLYRLDNGRYPTQDQGLNALIQKPTTDPIPNNWKDGGYLERLPNDPWGNSYKYLNP HHHHHHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCEECC GVHGEIDVFSYGADGKEGGESNDSDIGSWQ CCCCCEEEEEECCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1588814; 1309616; 10984043 [H]