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The map label for this gene is ureF [H]

Identifier: 126452298

GI number: 126452298

Start: 3034029

End: 3034739

Strand: Direct

Name: ureF [H]

Synonym: BURPS1106A_3114

Alternate gene names: 126452298

Gene position: 3034029-3034739 (Clockwise)

Preceding gene: 126455370

Following gene: 126453111

Centisome position: 76.07

GC content: 72.01

Gene sequence:

>711_bases
ATGGCCCGTGTTGCTCGCACGGTCATCACCATGGACACCGCTGAGCTCGTCGCGCTGCTGCACCTCGCGTCGCCGGCGTT
GCCGATCGGCGCGTTCAGCTATTCGCAGGGTCTCGAAGCCGCGCTCGACGCGCCGCTGATTCGCGACGCCGACGGCGCGC
GCGACTGGATCGCGAGCGGCCTCGCCGACGTGCTCGCGCAAGGCGAGCTGCCGTTCCTCGCGCATCAGCTCGCGCGCTGG
CACGCGCACGACGCCGCCGCGCTCGCCGACGCGAACGACGAATTCGTCGCGAGCCGCGAATCGTTCGAGCTGCGCCGCGA
AACCGAACAGATGGGCTGGTCGCTCGCGCAGCTGTGCGCGTCGCTCGAATGGGGCGACGCCGCGCGCCGAGCAACGCTCG
CGTCGATCCCGTCGGTCGCGCTGCCGAGCGCGTTCGCGTTCGCGGCCGCCGCGCACGGCGCGACGCCCGACGCGGCGCTC
GCCGCCTATGCGTTCGGCTGGGTCGAGAACCAGACGGCCGCCGCGATCAAGGCGGTGCCGCTCGGCCAGCTCGCCGGCCA
GAAGATCATCGTCGCGCTGCGCGAGCCGATCCGCGACGCGGTGCGCCGCGCGCTCGCGACGCCGCCGGAGGCGATCAACA
CGTTCGCGCCTCAGCTCGGCATCCTGTCCGCGCGGCACGAATCGCAGTATTCGCGTCTGTTCCGTTCATAA

Upstream 100 bases:

>100_bases
TACGCGCTCGCGCAGCAGGTGTTCGACGAGCATCACGGCCACTCGCACTCGCACTCGCACGATCACGATCACGATCACGA
TCACGATCACGATCATCAGC

Downstream 100 bases:

>100_bases
GCATCCCAGAGCATTCTCACGCACCGAATCATGAACGCACCTCGCTTTGCGGCGCCCGCCCGCCGCACGAAGAAACTCCC
GCCCCTGCGCGTCGGCATCG

Product: urease accessory protein UreF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 236; Mature: 235

Protein sequence:

>236_residues
MARVARTVITMDTAELVALLHLASPALPIGAFSYSQGLEAALDAPLIRDADGARDWIASGLADVLAQGELPFLAHQLARW
HAHDAAALADANDEFVASRESFELRRETEQMGWSLAQLCASLEWGDAARRATLASIPSVALPSAFAFAAAAHGATPDAAL
AAYAFGWVENQTAAAIKAVPLGQLAGQKIIVALREPIRDAVRRALATPPEAINTFAPQLGILSARHESQYSRLFRS

Sequences:

>Translated_236_residues
MARVARTVITMDTAELVALLHLASPALPIGAFSYSQGLEAALDAPLIRDADGARDWIASGLADVLAQGELPFLAHQLARW
HAHDAAALADANDEFVASRESFELRRETEQMGWSLAQLCASLEWGDAARRATLASIPSVALPSAFAFAAAAHGATPDAAL
AAYAFGWVENQTAAAIKAVPLGQLAGQKIIVALREPIRDAVRRALATPPEAINTFAPQLGILSARHESQYSRLFRS
>Mature_235_residues
ARVARTVITMDTAELVALLHLASPALPIGAFSYSQGLEAALDAPLIRDADGARDWIASGLADVLAQGELPFLAHQLARWH
AHDAAALADANDEFVASRESFELRRETEQMGWSLAQLCASLEWGDAARRATLASIPSVALPSAFAFAAAAHGATPDAALA
AYAFGWVENQTAAAIKAVPLGQLAGQKIIVALREPIRDAVRRALATPPEAINTFAPQLGILSARHESQYSRLFRS

Specific function: Required for maturation of urease via the functional incorporation of the urease nickel metallocenter [H]

COG id: COG0830

COG function: function code O; Urease accessory protein UreF

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ureF family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002639 [H]

Pfam domain/function: PF01730 UreF [H]

EC number: NA

Molecular weight: Translated: 25058; Mature: 24926

Theoretical pI: Translated: 5.59; Mature: 5.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARVARTVITMDTAELVALLHLASPALPIGAFSYSQGLEAALDAPLIRDADGARDWIASG
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LADVLAQGELPFLAHQLARWHAHDAAALADANDEFVASRESFELRRETEQMGWSLAQLCA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
SLEWGDAARRATLASIPSVALPSAFAFAAAAHGATPDAALAAYAFGWVENQTAAAIKAVP
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCC
LGQLAGQKIIVALREPIRDAVRRALATPPEAINTFAPQLGILSARHESQYSRLFRS
HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ARVARTVITMDTAELVALLHLASPALPIGAFSYSQGLEAALDAPLIRDADGARDWIASG
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHH
LADVLAQGELPFLAHQLARWHAHDAAALADANDEFVASRESFELRRETEQMGWSLAQLCA
HHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHH
SLEWGDAARRATLASIPSVALPSAFAFAAAAHGATPDAALAAYAFGWVENQTAAAIKAVP
CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHCC
LGQLAGQKIIVALREPIRDAVRRALATPPEAINTFAPQLGILSARHESQYSRLFRS
HHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA