| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is bimA [H]
Identifier: 126452288
GI number: 126452288
Start: 955205
End: 956197
Strand: Reverse
Name: bimA [H]
Synonym: BURPS1106A_0972
Alternate gene names: 126452288
Gene position: 956197-955205 (Counterclockwise)
Preceding gene: 126451803
Following gene: 126452873
Centisome position: 23.97
GC content: 71.3
Gene sequence:
>993_bases GTGAAAGTCTTCCGCGGCCTGCCCAACGCCGAGAGCCGCGCCCCGTGCGCGCTGACGATCGGCAACTTCGACGGTGTCCA TCGCGGCCACCAGGCCCTGCTCGCGCGCGTGCGCGCGGCGGCGGACGCGCGCGGGCTGCCCGTGTGCGTGATGACGTTCG AGCCGCATCCGCGCGAATTCTTCAATCCGGCGAGCGCGCCGCCGCGCATCGCGATGCTGCGCGACAAGCTCGAGGCGCTG CGCGAGCACGGCGTCGACCGCGTGGTCGTCGAGCACTTCAACCATACGTTCGCGAGCCAGTCGCCCGAGGCGTTCGTCGA ACGCACGCTCGTCCACGGGCTGCACACCCGCTGGATCATGGTCGGCGACGACTTCTGCTACGGCGCGAGGCGCGCGGGCG ATTTCGCGTCGCTGAAGGCGGCGGGCGAGCGCTTCGGCTTCGAGGTCGAGCAGATGGAAACGCTCGCCGACGCCGATGGC GCGCGCATTTCGAGTTCCGGCGTGCGCGCCGCGCTCGCGGCGGGAGATCTCGACGCCGCCGCGCGCGCGCTCGGCCACGG CTATGCGATCAGCGGCCACGTCGCGCACGGGCTGAAGCTCGGCCGCGACCTCGGCTTCCCGACGCTGAACCTGCCGATCG CTCACAAGCGCCCGGCCCTGTCGGGCATCTTCGTCGTGCGCGTGCACGGCCTCGCGCCCGAGCCGCTGCCGGGCGTCGCG AGCCTCGGCGTGCGGCCGACCGTCGACGATTCCGGCCGCGTGCTGCTCGAAGTGCACCTGCTCGACTGGCACGGCGATGC ATACGGCAAGCTCGTTCGCGTCGAATTCCTGAAGAAGCTGCGCGACGAGGCGAAATTCGTCGATCTCGAAACGCTCTCGC GCGCGATCGCGCAGGACGTCGTCGACACGCGCGCGTACTTCGCCGAGCACGGTCGCGCGCCGGGCAGCCGCGCGACCGGC TTCGCGACGTCGGCCACCGACCGAATTAGCTGA
Upstream 100 bases:
>100_bases GCCGTTTCCGGCATCCTGAGCCGCCCGGCCGCCCGAACGTTTATAATCTCTTGCTTTGCGGCATCCGGCCGCGCTTTCCC CCACGCTGTCACCCGCTATC
Downstream 100 bases:
>100_bases TCGACGCCGCGCCCGCGCCGGGCGCCGCCAGCGTCGCGCCGCGCGAACGGCGCCGCGCCTCACCGTTTTCACGACGCGCG AGCGTCCCCCCGATTTCACA
Product: bifunctional riboflavin kinase/FMN adenylyltransferase
Products: NA
Alternate protein names: Riboflavin kinase; Flavokinase; FMN adenylyltransferase; FAD pyrophosphorylase; FAD synthase [H]
Number of amino acids: Translated: 330; Mature: 330
Protein sequence:
>330_residues MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREFFNPASAPPRIAMLRDKLEAL REHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHTRWIMVGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADG ARISSSGVRAALAAGDLDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEPLPGVA SLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAIAQDVVDTRAYFAEHGRAPGSRATG FATSATDRIS
Sequences:
>Translated_330_residues MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREFFNPASAPPRIAMLRDKLEAL REHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHTRWIMVGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADG ARISSSGVRAALAAGDLDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEPLPGVA SLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAIAQDVVDTRAYFAEHGRAPGSRATG FATSATDRIS >Mature_330_residues MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREFFNPASAPPRIAMLRDKLEAL REHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHTRWIMVGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADG ARISSSGVRAALAAGDLDAAARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEPLPGVA SLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAIAQDVVDTRAYFAEHGRAPGSRATG FATSATDRIS
Specific function: Unknown
COG id: COG0196
COG function: function code H; FAD synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ribF family [H]
Homologues:
Organism=Escherichia coli, GI1786208, Length=310, Percent_Identity=46.7741935483871, Blast_Score=264, Evalue=6e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR015864 - InterPro: IPR015865 - InterPro: IPR002606 - InterPro: IPR014729 [H]
Pfam domain/function: PF06574 FAD_syn; PF01687 Flavokinase [H]
EC number: =2.7.1.26; =2.7.7.2 [H]
Molecular weight: Translated: 35668; Mature: 35668
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHH FNPASAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHTRWIM CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEE VGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALAAGDLDAA ECCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCEEEHHHCCHHHH ARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEPLPGVA HHHHCCCCEEECHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHH SLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAIAQDV HCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHH VDTRAYFAEHGRAPGSRATGFATSATDRIS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKVFRGLPNAESRAPCALTIGNFDGVHRGHQALLARVRAAADARGLPVCVMTFEPHPREF CCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHH FNPASAPPRIAMLRDKLEALREHGVDRVVVEHFNHTFASQSPEAFVERTLVHGLHTRWIM CCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCEEEEE VGDDFCYGARRAGDFASLKAAGERFGFEVEQMETLADADGARISSSGVRAALAAGDLDAA ECCCHHCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCCCEECCCCCEEEHHHCCHHHH ARALGHGYAISGHVAHGLKLGRDLGFPTLNLPIAHKRPALSGIFVVRVHGLAPEPLPGVA HHHHCCCCEEECHHHHHHHHHHHCCCCEECCCCCCCCCCCCCEEEEEEECCCCCCCCCHH SLGVRPTVDDSGRVLLEVHLLDWHGDAYGKLVRVEFLKKLRDEAKFVDLETLSRAIAQDV HCCCCCCCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHEECHHHHHHHHHHHH VDTRAYFAEHGRAPGSRATGFATSATDRIS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]