| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is ilvB [H]
Identifier: 126452197
GI number: 126452197
Start: 1253365
End: 1255128
Strand: Direct
Name: ilvB [H]
Synonym: BURPS1106A_1281
Alternate gene names: 126452197
Gene position: 1253365-1255128 (Clockwise)
Preceding gene: 126455107
Following gene: 126454468
Centisome position: 31.42
GC content: 63.66
Gene sequence:
>1764_bases ATGAACATGCCCAGCGCGGAATTCTCCACGTCGGAATCCCTTTCCCCTCAGAAAACCGGCTCCATCGGCGCCACCGTGCT CATGAAGGCACTGGCCGACGAGAACGTCGAATTCATCTGGGGCTACCCTGGCGGCTCGGTCCTCTACATCTACGACGAGC TGTACAAGCAAGACAAGATTCAACACGTGCTCGTGCGCCACGAGCAGGCCGCCGTGCACGCCGCGGACGCGTACTCGCGC TCGACGGGCAAGGTCGGCGTGTGTCTCGTCACATCCGGCCCGGGCGTGACGAACGCGGTGACGGGCATCGCCACCGCCTA CATGGATTCGATCCCGCTCGTCGTGATCAGCGGCCAGGTGCCGACCGCGGCGATCGGCCAGGACGCGTTCCAGGAGTGCG ATACCGTTGGCATCACGCGGCCGTGCGTGAAGCACAATTTCCTCGTGAAGGACGTGCGCGAGCTCGCGCAAACCGTCAAG AAGGCGTTCTACATCGCGCGTACCGGCCGGCCCGGTCCGGTCCTCATCGACATCCCGAAGGACATCTCGAAGACGCCGTG CGAGTACGAGCCCGTCAAGAACGTGTCGCTGCGCTCGTACAACCCGGTCACGAAAGGCCATTCGGGGCAGATCCGCAAGG CGGTGTCGCTGCTGCTGTCCGCGAAGCGTCCGTACATCTACACGGGCGGCGGCATCATCCTCGCCGACGCGTCGCGCGAG CTGAACCAGTTCGCCGACCTGCTCGGCTATCCCGTCACGAACACGCTGATGGGCCTCGGCGGCTATCGCTCGTCGGACAG GAAATTCCTCGGCATGCTCGGCATGCACGGCACCTACGAAGCGAACATGGCGATGCAGCACTGCGACGTGTTGATCGCGA TCGGCGCGCGCTTCGACGACCGCGTGATCGGCGATCCGGCGCACTTCGCGTCGCGCCCGCGCAAGATCATCCATATCGAC ATCGATCCGTCGTCGATCTCGAAGCGCGTGAAGGTCGACATCCCGATCGTCGGCGACGTGAAGGAAGTGCTCAAGGAGCT GATCGAGCAGTTGCAGACGGCCGAGCACGGCCCGGACGCCGACGCGCTCGCGCAGTGGTGGAAGGAAATCGAAGGCTGGC GCGGGACGGATTGCCTGAAGTACGACCGCGCGAGCGAGATCATCAAGCCGCAATACGTCGTCGAGAAGCTCTGGGAGCTC ACCGACGGCAACGCGTTCGTCTGCTCGGACGTCGGCCAGCACCAGATGTGGGCCGCGCAGTTCTACCGCTTCAACAAGCC GCGCCGCTGGATCAACTCGGGCGGCCTCGGCACGATGGGCTTCGGCCTGCCCGCCGCGATGGGCGTCAAGATGGCGCACC CGGACGACGACGTCGTCTGCATCACGGGCGAGGGCTCGATCCAGATGTGCATCCAGGAGCTGTCGACCTGCAAGCAGTAC GACACTCCGGTGAAGATCATTTCGCTGAACAACCGCTACCTCGGCATGGTCCGCCAATGGCAGCAGATCGAATACAGCAA GCGCTATTCGCATTCGTACATGGATGCGCTGCCCGATTTCGTGAAGCTCGCGCAGGCGTACGGCCATATCGGGATGCGCA TCGAAAAATCCGCGGACGTCGAGCCGGCGCTCAAGGAAGCGCTGAGCCTGAAGGACCGCACCGTGTTTCTCGACTTCCAG ACCGACCCCACCGAGAACGTCTGGCCGATGGTCCAGGCCGGCAAGGGCATCACCGAGATGCTGCTCGGATCGGAAGATCT GTAA
Upstream 100 bases:
>100_bases TGAAGCCCGCCTTTCAACTGGACGCGCCGCTTGAACCCGAGCCACAAGCCCGGCAGAGAGCACCCGATCAATTTTTTGCC GAAAATTCGAAAGGTCAAAG
Downstream 100 bases:
>100_bases CGGCGCGATGCGCTCGAAGCCGCGGGCGGCCGCCTTCACGAAGGGCGGCGCGGCACGCGGCGGGCGCCGCGCGACACGCA ACGACACGGGATTATTCTGG
Product: acetolactate synthase 3 catalytic subunit
Products: NA
Alternate protein names: AHAS-III; ALS-III; Acetohydroxy-acid synthase III large subunit [H]
Number of amino acids: Translated: 587; Mature: 587
Protein sequence:
>587_residues MNMPSAEFSTSESLSPQKTGSIGATVLMKALADENVEFIWGYPGGSVLYIYDELYKQDKIQHVLVRHEQAAVHAADAYSR STGKVGVCLVTSGPGVTNAVTGIATAYMDSIPLVVISGQVPTAAIGQDAFQECDTVGITRPCVKHNFLVKDVRELAQTVK KAFYIARTGRPGPVLIDIPKDISKTPCEYEPVKNVSLRSYNPVTKGHSGQIRKAVSLLLSAKRPYIYTGGGIILADASRE LNQFADLLGYPVTNTLMGLGGYRSSDRKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDDRVIGDPAHFASRPRKIIHID IDPSSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDADALAQWWKEIEGWRGTDCLKYDRASEIIKPQYVVEKLWEL TDGNAFVCSDVGQHQMWAAQFYRFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVVCITGEGSIQMCIQELSTCKQY DTPVKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAQAYGHIGMRIEKSADVEPALKEALSLKDRTVFLDFQ TDPTENVWPMVQAGKGITEMLLGSEDL
Sequences:
>Translated_587_residues MNMPSAEFSTSESLSPQKTGSIGATVLMKALADENVEFIWGYPGGSVLYIYDELYKQDKIQHVLVRHEQAAVHAADAYSR STGKVGVCLVTSGPGVTNAVTGIATAYMDSIPLVVISGQVPTAAIGQDAFQECDTVGITRPCVKHNFLVKDVRELAQTVK KAFYIARTGRPGPVLIDIPKDISKTPCEYEPVKNVSLRSYNPVTKGHSGQIRKAVSLLLSAKRPYIYTGGGIILADASRE LNQFADLLGYPVTNTLMGLGGYRSSDRKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDDRVIGDPAHFASRPRKIIHID IDPSSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDADALAQWWKEIEGWRGTDCLKYDRASEIIKPQYVVEKLWEL TDGNAFVCSDVGQHQMWAAQFYRFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVVCITGEGSIQMCIQELSTCKQY DTPVKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAQAYGHIGMRIEKSADVEPALKEALSLKDRTVFLDFQ TDPTENVWPMVQAGKGITEMLLGSEDL >Mature_587_residues MNMPSAEFSTSESLSPQKTGSIGATVLMKALADENVEFIWGYPGGSVLYIYDELYKQDKIQHVLVRHEQAAVHAADAYSR STGKVGVCLVTSGPGVTNAVTGIATAYMDSIPLVVISGQVPTAAIGQDAFQECDTVGITRPCVKHNFLVKDVRELAQTVK KAFYIARTGRPGPVLIDIPKDISKTPCEYEPVKNVSLRSYNPVTKGHSGQIRKAVSLLLSAKRPYIYTGGGIILADASRE LNQFADLLGYPVTNTLMGLGGYRSSDRKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDDRVIGDPAHFASRPRKIIHID IDPSSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDADALAQWWKEIEGWRGTDCLKYDRASEIIKPQYVVEKLWEL TDGNAFVCSDVGQHQMWAAQFYRFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVVCITGEGSIQMCIQELSTCKQY DTPVKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAQAYGHIGMRIEKSADVEPALKEALSLKDRTVFLDFQ TDPTENVWPMVQAGKGITEMLLGSEDL
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=585, Percent_Identity=25.6410256410256, Blast_Score=175, Evalue=1e-43, Organism=Homo sapiens, GI21361361, Length=511, Percent_Identity=27.3972602739726, Blast_Score=156, Evalue=6e-38, Organism=Escherichia coli, GI87081685, Length=571, Percent_Identity=57.6182136602452, Blast_Score=679, Evalue=0.0, Organism=Escherichia coli, GI1790104, Length=560, Percent_Identity=41.0714285714286, Blast_Score=418, Evalue=1e-118, Organism=Escherichia coli, GI1786717, Length=534, Percent_Identity=34.0823970037453, Blast_Score=315, Evalue=7e-87, Organism=Escherichia coli, GI1787096, Length=566, Percent_Identity=28.0918727915194, Blast_Score=208, Evalue=8e-55, Organism=Escherichia coli, GI1788716, Length=563, Percent_Identity=23.4458259325044, Blast_Score=141, Evalue=1e-34, Organism=Caenorhabditis elegans, GI17531299, Length=550, Percent_Identity=26.3636363636364, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17531301, Length=550, Percent_Identity=26.3636363636364, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17542570, Length=517, Percent_Identity=26.6924564796905, Blast_Score=140, Evalue=3e-33, Organism=Saccharomyces cerevisiae, GI6323755, Length=586, Percent_Identity=42.320819112628, Blast_Score=456, Evalue=1e-129, Organism=Saccharomyces cerevisiae, GI6320816, Length=476, Percent_Identity=25.6302521008403, Blast_Score=107, Evalue=5e-24, Organism=Saccharomyces cerevisiae, GI6321524, Length=518, Percent_Identity=21.042471042471, Blast_Score=84, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320123, Length=544, Percent_Identity=20.2205882352941, Blast_Score=81, Evalue=5e-16, Organism=Saccharomyces cerevisiae, GI6323073, Length=488, Percent_Identity=22.3360655737705, Blast_Score=77, Evalue=5e-15, Organism=Drosophila melanogaster, GI19922626, Length=567, Percent_Identity=26.1022927689594, Blast_Score=179, Evalue=6e-45,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 64867; Mature: 64867
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMPSAEFSTSESLSPQKTGSIGATVLMKALADENVEFIWGYPGGSVLYIYDELYKQDKI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHH QHVLVRHEQAAVHAADAYSRSTGKVGVCLVTSGPGVTNAVTGIATAYMDSIPLVVISGQV HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC PTAAIGQDAFQECDTVGITRPCVKHNFLVKDVRELAQTVKKAFYIARTGRPGPVLIDIPK CCHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCC DISKTPCEYEPVKNVSLRSYNPVTKGHSGQIRKAVSLLLSAKRPYIYTGGGIILADASRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEECCHHH LNQFADLLGYPVTNTLMGLGGYRSSDRKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDD HHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCC RVIGDPAHFASRPRKIIHIDIDPSSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDA CCCCCCHHHHCCCCEEEEEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCH DALAQWWKEIEGWRGTDCLKYDRASEIIKPQYVVEKLWELTDGNAFVCSDVGQHQMWAAQ HHHHHHHHHHCCCCCCCHHHHCCHHHHCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH FYRFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVVCITGEGSIQMCIQELSTCKQY HHHCCCCHHHHCCCCCCCCCCCCHHHHCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHC DTPVKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAQAYGHIGMRIEKSADV CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC EPALKEALSLKDRTVFLDFQTDPTENVWPMVQAGKGITEMLLGSEDL CHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCC >Mature Secondary Structure MNMPSAEFSTSESLSPQKTGSIGATVLMKALADENVEFIWGYPGGSVLYIYDELYKQDKI CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCCCEEEEEHHHHHHHHH QHVLVRHEQAAVHAADAYSRSTGKVGVCLVTSGPGVTNAVTGIATAYMDSIPLVVISGQV HHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCC PTAAIGQDAFQECDTVGITRPCVKHNFLVKDVRELAQTVKKAFYIARTGRPGPVLIDIPK CCHHHCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCEEEECCC DISKTPCEYEPVKNVSLRSYNPVTKGHSGQIRKAVSLLLSAKRPYIYTGGGIILADASRE CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEECCCEEEECCHHH LNQFADLLGYPVTNTLMGLGGYRSSDRKFLGMLGMHGTYEANMAMQHCDVLIAIGARFDD HHHHHHHHCCCHHHHHHHCCCCCCCCHHHHHHHCCCCCCHHHHHHHHCCEEEEECCCCCC RVIGDPAHFASRPRKIIHIDIDPSSISKRVKVDIPIVGDVKEVLKELIEQLQTAEHGPDA CCCCCCHHHHCCCCEEEEEEECHHHHCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCH DALAQWWKEIEGWRGTDCLKYDRASEIIKPQYVVEKLWELTDGNAFVCSDVGQHQMWAAQ HHHHHHHHHHCCCCCCCHHHHCCHHHHCCHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH FYRFNKPRRWINSGGLGTMGFGLPAAMGVKMAHPDDDVVCITGEGSIQMCIQELSTCKQY HHHCCCCHHHHCCCCCCCCCCCCHHHHCEEEECCCCCEEEEECCCHHHHHHHHHHHHHHC DTPVKIISLNNRYLGMVRQWQQIEYSKRYSHSYMDALPDFVKLAQAYGHIGMRIEKSADV CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCC EPALKEALSLKDRTVFLDFQTDPTENVWPMVQAGKGITEMLLGSEDL CHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHCCCCHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 6308579; 1630901; 9278503; 3891724; 9298646 [H]