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The map label for this gene is lutC [H]

Identifier: 126452182

GI number: 126452182

Start: 2827197

End: 2827859

Strand: Reverse

Name: lutC [H]

Synonym: BURPS1106A_2872

Alternate gene names: 126452182

Gene position: 2827859-2827197 (Counterclockwise)

Preceding gene: 126454646

Following gene: 126453505

Centisome position: 70.9

GC content: 72.7

Gene sequence:

>663_bases
ATGGACACATCGGCCGCCCGCCGCAACATCCTCGCGCGCATCCGCGCGGCGCAGGGCCGCCCGGCCGAGCTGGCCGACGT
GGAGCGCGAGCATGCGGCCGACTATGTCGAGCGCCATCCGGCGGGCCCGCGCCCGCCGCTCGGCGACGATCTCGTTTCGC
GCTTCGTCGACGAGGCGCTGCGGCTCGCGACGACGGTCGATACCGTCGCGTCGATGCGCGATGCGCCCGCCGCGGCCGCC
GCGTATCTGCGGCGCATGGGGCTCGGCACGCAGGCGATCGCGTGGCCGACGCTCGACGCGCTCGATTGGGCGGGCGCGGG
GCTCGCGGTCGAATTCAGGAAGCCCGTCGACGGCGATCGCATCGGCATCACCGGCTGTTTTTGCGCGACGGCGGAAACCG
GTTCGCTGGTTCTGCTGTCTAGTCCGACGACGTGCGCGTCCGCCGCGCTGCTGCCCGAGACCCATATCGCGCTCGTGAGC
GCGTCGCGCATCGTCGCCGGGCACGAGGACGCGTTCGCGCTGATCCGCGCGGAGCGCGGCGTATTGCCGCGTGCGGTGAA
CTTCGTGTCGGGGCCGTCGCGCACCGGTGACATCGAGCAGACGATCGTGCTCGGCGCGCACGGGCCGTCGCGGGTTCACG
CGATCGTCGTGCGTGACGCGTGA

Upstream 100 bases:

>100_bases
GCGGTCCGGCAGCGTGTTTTTCGTACCGGCGGCGGCGGGCGTGCGCCGTCTCGGCCGGTATAATCGGGCCGGTATCGAAA
GCCATCGTCACGAGGAGTTC

Downstream 100 bases:

>100_bases
TGCGGCCGCCGCCGCGTCACGCGCCGTATCCATTCGCATTTCAAGAGGAATTCACATGAAACGACATGCCGCCTGGGCGG
GCATGGCGCTGGGAGGCGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MDTSAARRNILARIRAAQGRPAELADVEREHAADYVERHPAGPRPPLGDDLVSRFVDEALRLATTVDTVASMRDAPAAAA
AYLRRMGLGTQAIAWPTLDALDWAGAGLAVEFRKPVDGDRIGITGCFCATAETGSLVLLSSPTTCASAALLPETHIALVS
ASRIVAGHEDAFALIRAERGVLPRAVNFVSGPSRTGDIEQTIVLGAHGPSRVHAIVVRDA

Sequences:

>Translated_220_residues
MDTSAARRNILARIRAAQGRPAELADVEREHAADYVERHPAGPRPPLGDDLVSRFVDEALRLATTVDTVASMRDAPAAAA
AYLRRMGLGTQAIAWPTLDALDWAGAGLAVEFRKPVDGDRIGITGCFCATAETGSLVLLSSPTTCASAALLPETHIALVS
ASRIVAGHEDAFALIRAERGVLPRAVNFVSGPSRTGDIEQTIVLGAHGPSRVHAIVVRDA
>Mature_220_residues
MDTSAARRNILARIRAAQGRPAELADVEREHAADYVERHPAGPRPPLGDDLVSRFVDEALRLATTVDTVASMRDAPAAAA
AYLRRMGLGTQAIAWPTLDALDWAGAGLAVEFRKPVDGDRIGITGCFCATAETGSLVLLSSPTTCASAALLPETHIALVS
ASRIVAGHEDAFALIRAERGVLPRAVNFVSGPSRTGDIEQTIVLGAHGPSRVHAIVVRDA

Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]

COG id: COG1556

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the lutC/ykgG family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003741
- InterPro:   IPR002698
- InterPro:   IPR022823 [H]

Pfam domain/function: PF02589 DUF162 [H]

EC number: NA

Molecular weight: Translated: 23131; Mature: 23131

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00191 CYTOCHROME_B5_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTSAARRNILARIRAAQGRPAELADVEREHAADYVERHPAGPRPPLGDDLVSRFVDEAL
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RLATTVDTVASMRDAPAAAAAYLRRMGLGTQAIAWPTLDALDWAGAGLAVEFRKPVDGDR
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHCCCCEEEEECCCCCCCE
IGITGCFCATAETGSLVLLSSPTTCASAALLPETHIALVSASRIVAGHEDAFALIRAERG
EEEEEEEEEECCCCCEEEEECCCHHHHHHCCCCHHHHEEEHHHHEECCCHHHEEEEHHCC
VLPRAVNFVSGPSRTGDIEQTIVLGAHGPSRVHAIVVRDA
CCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECC
>Mature Secondary Structure
MDTSAARRNILARIRAAQGRPAELADVEREHAADYVERHPAGPRPPLGDDLVSRFVDEAL
CCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHH
RLATTVDTVASMRDAPAAAAAYLRRMGLGTQAIAWPTLDALDWAGAGLAVEFRKPVDGDR
HHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCEECCCCHHHHHCCCCEEEEECCCCCCCE
IGITGCFCATAETGSLVLLSSPTTCASAALLPETHIALVSASRIVAGHEDAFALIRAERG
EEEEEEEEEECCCCCEEEEECCCHHHHHHCCCCHHHHEEEHHHHEECCCHHHEEEEHHCC
VLPRAVNFVSGPSRTGDIEQTIVLGAHGPSRVHAIVVRDA
CCHHHHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA