| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452124
Identifier: 126452124
GI number: 126452124
Start: 407818
End: 408297
Strand: Direct
Name: 126452124
Synonym: BURPS1106A_0442
Alternate gene names: NA
Gene position: 407818-408297 (Clockwise)
Preceding gene: 126453357
Following gene: 126454090
Centisome position: 10.22
GC content: 71.88
Gene sequence:
>480_bases ATGGCATGCCATGGCATGCCATGGCGTGGCGTGGCGTGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGGCAAGGCGGGAC GGGACGGGACGGCGCGAGGCGACGCGGGATGACGCACTGTCGGCGCGCCCGGCCGCCGCGTTCGCTGTTTCGGTTGCGTT TTCACCACGCTGACAGAATACTTTCGCTGCGACGCTTTGCCGCATGGGGGCGGCCCCGGCGCCCGGCGCCGTCCCGGAAC GGTCACAGTCGCGTGCTATCATGGCCGCCGCCGAATACATCACATCGGGCCGCTCGCGCGCGGCCGTCCACGACGGCAGG CGCGTGCGGGGCCTTGCAACGAAGCCGGCGGTGCGCCGGCGCCTTTCAGGCACGCGCGACGCGGTTTTCGAACGCCGGGA GCGCCGAGTGCGGCCTGCCCCACGGTGGAAGCGCGGTCGCCCGGCGTCCGGCGCGAAACCTGCGTCCGGGCCCGGATTAG
Upstream 100 bases:
>100_bases AGCGGGGCCCGGGCGCGGGAACCGATGCGAGAACCGGCGCGGGCGCGCACGCCGCGCGGCGCACGACGACGTGACGCGGC ATGGCACGGCATGGCATGGC
Downstream 100 bases:
>100_bases CGCGTAAAATTATCGGCTTGGCTGCGAAAACGCCCGCACTGGGCCGGTTTTCCGCAACAGTCTCGTTTAGTTGTCGCATT GCGCAGAACAGGGGTGGGAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MACHGMPWRGVAWQGKARQGKARQGGTGRDGARRRGMTHCRRARPPRSLFRLRFHHADRILSLRRFAAWGRPRRPAPSRN GHSRVLSWPPPNTSHRAARARPSTTAGACGALQRSRRCAGAFQARATRFSNAGSAECGLPHGGSAVARRPARNLRPGPD
Sequences:
>Translated_159_residues MACHGMPWRGVAWQGKARQGKARQGGTGRDGARRRGMTHCRRARPPRSLFRLRFHHADRILSLRRFAAWGRPRRPAPSRN GHSRVLSWPPPNTSHRAARARPSTTAGACGALQRSRRCAGAFQARATRFSNAGSAECGLPHGGSAVARRPARNLRPGPD >Mature_158_residues ACHGMPWRGVAWQGKARQGKARQGGTGRDGARRRGMTHCRRARPPRSLFRLRFHHADRILSLRRFAAWGRPRRPAPSRNG HSRVLSWPPPNTSHRAARARPSTTAGACGALQRSRRCAGAFQARATRFSNAGSAECGLPHGGSAVARRPARNLRPGPD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17451; Mature: 17320
Theoretical pI: Translated: 12.86; Mature: 12.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACHGMPWRGVAWQGKARQGKARQGGTGRDGARRRGMTHCRRARPPRSLFRLRFHHADRI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSLRRFAAWGRPRRPAPSRNGHSRVLSWPPPNTSHRAARARPSTTAGACGALQRSRRCAG HHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHH AFQARATRFSNAGSAECGLPHGGSAVARRPARNLRPGPD HHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCC >Mature Secondary Structure ACHGMPWRGVAWQGKARQGKARQGGTGRDGARRRGMTHCRRARPPRSLFRLRFHHADRI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH LSLRRFAAWGRPRRPAPSRNGHSRVLSWPPPNTSHRAARARPSTTAGACGALQRSRRCAG HHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCHHCCCCCCCHHHHHHHHHHHHHHH AFQARATRFSNAGSAECGLPHGGSAVARRPARNLRPGPD HHHHHHHHCCCCCCCCCCCCCCCHHHHHCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA