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The map label for this gene is 126452090

Identifier: 126452090

GI number: 126452090

Start: 3553745

End: 3554866

Strand: Reverse

Name: 126452090

Synonym: BURPS1106A_3653

Alternate gene names: NA

Gene position: 3554866-3553745 (Counterclockwise)

Preceding gene: 126451777

Following gene: 126453523

Centisome position: 89.13

GC content: 69.7

Gene sequence:

>1122_bases
ATGCCGACCAACCTCACCGAGCTGCTGACGCCGATCAGCGAAGCGTCGCCGTGCGGCGACGATCTCCTGTTCTCCGCCGA
ATTCGACGCGATCCAGCACGCGCGCAAGTTCGACGATCCGTCGCTCGACCAGGGCGAATGGATCACCGATATCAAGGAAG
CGGACTGGGGCTTCGTCGTCGAGCAAGCGAGCGCGCTGTTGCGCGAGCGCACGAAGGATCTGCGGCTCGCGGTATGGCTG
ACCGAGGCGCTCGCGATCGAGGACGGCATCGGTGGGCTCACGCAGGGCTACACGCTGCTCACGAGCCTCTGCCGGCAGTT
CTGGGACCACGTGCATCCGCTGCCCGACGGCGACGACGCCGAATACCGGCTCGGCAACGTCGCGTGGCTCGCCGGGCGCA
CGGTCGAGCTGCTGCGCGCGGTGCCGCTCACCGACGGCGCGGCGAATGCGTTCAGCGAGCTCGACTGGGACGTCGCGCAA
CACGTCGCGCAGGCGATCCGGCGCGATCCCGAACAGGCGAGCGAGATCGCGCGCGGCAAGCCGTCCGTCGAGCAGATCGA
GGCGTCGAAGCGGATGACGCCCGTGGCGTTCTACGCGCGGCTGCTCGGCGAGCTGAAAGCGTTCCAGGCGGCGCTCGACG
CGCTCGAGCAGGAACTCGACGGGCGGGCGGGCGACGCGGCGCCGAGCTTCCGGCAGGCGCGCGACGCGTACGAAACCGTC
TACCGGCTCGCCGAACGCTTCGCGAAGGAGCAGGGCTACTCGGCCGACGCGCAGCCGCAGGCCGTCGCGCCGCCCGCGCC
GAGCGAGCGCGCGGAGCCGAGCTTCAAGACGCCGCTTCATTCGGAGGAACCCGTGCCGAGACACGCACACGCGCCGTCCG
CGCCCGCGCCGATCGTGATCGCCGGCATTCAGAATCGCGCGCAGGCCGTCGAGCAACTGCGCGCGGTCGCGAAATATTTC
CGCGGAACCGAGCCGCACAGCCCCGTCGCGTATCTCGCCGACAAGGCGGCCGAATGGGCGGACATGCCGCTGCATCAATG
GCTTGCGTCGGTCGTCAAGGACGACGGCTCGCTCGCGCATATCCGCGAGCTGCTCGGCCTGAAGCCGGACGATAACGCGT
GA

Upstream 100 bases:

>100_bases
CGGTCGAGTAAGGCCGGCGCGCGGCGCACGTCACGAGCCGCGCGCATCATCAAGCAACGACGGACGCCGCGACAACGCAC
TGACAAAATAGTATTCGACC

Downstream 100 bases:

>100_bases
GCGCGGGCCGGCCGATGTCGGCCGGCCGCAAGAACGGAAAAGCGACGCAGCGGCCCCGCGGGGCCGCTGCGTCGCTTTTT
TCACATGCCGTCTCGACTGC

Product: ImpA-related N-terminal family protein

Products: NA

Alternate protein names: ImpA Family Type VI Secretion-Associated Protein; ImpA Domain-Containing Protein; ImpA N-Terminal; ImpA-Related N-Terminal Protein; ImpA-Like; Cytoplasmic Protein; ImpA-Like N-Terminal Family Protein; Type VI Secretion-Associated Protein; ImpA-Related N-Terminal Family Protein; Type VI Secretion System Protein TssA; Type VI Secretion System Protein EvpK; Inner Membrane Protein; ImpA Domain Protein; Protein ImpA; ImpA-Related N-Terminal Domain-Containing; ImpA-Related Protein; T6ss A; ImpA-Like Protein

Number of amino acids: Translated: 373; Mature: 372

Protein sequence:

>373_residues
MPTNLTELLTPISEASPCGDDLLFSAEFDAIQHARKFDDPSLDQGEWITDIKEADWGFVVEQASALLRERTKDLRLAVWL
TEALAIEDGIGGLTQGYTLLTSLCRQFWDHVHPLPDGDDAEYRLGNVAWLAGRTVELLRAVPLTDGAANAFSELDWDVAQ
HVAQAIRRDPEQASEIARGKPSVEQIEASKRMTPVAFYARLLGELKAFQAALDALEQELDGRAGDAAPSFRQARDAYETV
YRLAERFAKEQGYSADAQPQAVAPPAPSERAEPSFKTPLHSEEPVPRHAHAPSAPAPIVIAGIQNRAQAVEQLRAVAKYF
RGTEPHSPVAYLADKAAEWADMPLHQWLASVVKDDGSLAHIRELLGLKPDDNA

Sequences:

>Translated_373_residues
MPTNLTELLTPISEASPCGDDLLFSAEFDAIQHARKFDDPSLDQGEWITDIKEADWGFVVEQASALLRERTKDLRLAVWL
TEALAIEDGIGGLTQGYTLLTSLCRQFWDHVHPLPDGDDAEYRLGNVAWLAGRTVELLRAVPLTDGAANAFSELDWDVAQ
HVAQAIRRDPEQASEIARGKPSVEQIEASKRMTPVAFYARLLGELKAFQAALDALEQELDGRAGDAAPSFRQARDAYETV
YRLAERFAKEQGYSADAQPQAVAPPAPSERAEPSFKTPLHSEEPVPRHAHAPSAPAPIVIAGIQNRAQAVEQLRAVAKYF
RGTEPHSPVAYLADKAAEWADMPLHQWLASVVKDDGSLAHIRELLGLKPDDNA
>Mature_372_residues
PTNLTELLTPISEASPCGDDLLFSAEFDAIQHARKFDDPSLDQGEWITDIKEADWGFVVEQASALLRERTKDLRLAVWLT
EALAIEDGIGGLTQGYTLLTSLCRQFWDHVHPLPDGDDAEYRLGNVAWLAGRTVELLRAVPLTDGAANAFSELDWDVAQH
VAQAIRRDPEQASEIARGKPSVEQIEASKRMTPVAFYARLLGELKAFQAALDALEQELDGRAGDAAPSFRQARDAYETVY
RLAERFAKEQGYSADAQPQAVAPPAPSERAEPSFKTPLHSEEPVPRHAHAPSAPAPIVIAGIQNRAQAVEQLRAVAKYFR
GTEPHSPVAYLADKAAEWADMPLHQWLASVVKDDGSLAHIRELLGLKPDDNA

Specific function: Unknown

COG id: COG3515

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40951; Mature: 40820

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTNLTELLTPISEASPCGDDLLFSAEFDAIQHARKFDDPSLDQGEWITDIKEADWGFVV
CCCCHHHHHHHHHHCCCCCCHHEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHH
EQASALLRERTKDLRLAVWLTEALAIEDGIGGLTQGYTLLTSLCRQFWDHVHPLPDGDDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EYRLGNVAWLAGRTVELLRAVPLTDGAANAFSELDWDVAQHVAQAIRRDPEQASEIARGK
CEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCC
PSVEQIEASKRMTPVAFYARLLGELKAFQAALDALEQELDGRAGDAAPSFRQARDAYETV
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
YRLAERFAKEQGYSADAQPQAVAPPAPSERAEPSFKTPLHSEEPVPRHAHAPSAPAPIVI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
AGIQNRAQAVEQLRAVAKYFRGTEPHSPVAYLADKAAEWADMPLHQWLASVVKDDGSLAH
ECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
IRELLGLKPDDNA
HHHHHCCCCCCCC
>Mature Secondary Structure 
PTNLTELLTPISEASPCGDDLLFSAEFDAIQHARKFDDPSLDQGEWITDIKEADWGFVV
CCCHHHHHHHHHHCCCCCCHHEECHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHH
EQASALLRERTKDLRLAVWLTEALAIEDGIGGLTQGYTLLTSLCRQFWDHVHPLPDGDDA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCC
EYRLGNVAWLAGRTVELLRAVPLTDGAANAFSELDWDVAQHVAQAIRRDPEQASEIARGK
CEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHCCC
PSVEQIEASKRMTPVAFYARLLGELKAFQAALDALEQELDGRAGDAAPSFRQARDAYETV
CCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHH
YRLAERFAKEQGYSADAQPQAVAPPAPSERAEPSFKTPLHSEEPVPRHAHAPSAPAPIVI
HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEE
AGIQNRAQAVEQLRAVAKYFRGTEPHSPVAYLADKAAEWADMPLHQWLASVVKDDGSLAH
ECHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH
IRELLGLKPDDNA
HHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA