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The map label for this gene is tse [H]

Identifier: 126452078

GI number: 126452078

Start: 1965509

End: 1967251

Strand: Direct

Name: tse [H]

Synonym: BURPS1106A_2002

Alternate gene names: 126452078

Gene position: 1965509-1967251 (Clockwise)

Preceding gene: 126453374

Following gene: 126454971

Centisome position: 49.28

GC content: 69.88

Gene sequence:

>1743_bases
ATGAACTTTCAAAACATGACTGTGAGCACGAAGCTGACCCTTGCGTTCGGTGCGCTGGTGGGACTCGTGCTGCTCGTGTC
CGTCCTGGCGCTGCACGCGCTCGGCGATGCGAACGACCGTTTCGCCAGCTACGTGAGCGGCATCAGCGCGCGCGCGGAAG
CGGCCGAGCAGGTACGCACGGCCGTGGACCGGCGCGCGATCGCCGCGCGCAATCTGGTGCTCGTGACGAAGCCCGCCGAC
GTCGAGCTCGAAAAGGCCGCCGTGACGCAGGCGGAGGACGACGTGCAGGCGCATCTGCGCCGGCTGAAGGAACTGCTCTC
GAGCGCGTCGGACGGGAACGACAAGGCGCGCGGCCTCGTCGCCGACATCGACCGCGTCGAGGCGCAATACGGCCCGGTCG
CGCTCGCGATCGTCAACGCCGCGCTGAACAATCGGCACGACGAAGCGATCACGATGATGAACGACCAGTGCCGCCCGCTG
CTCGCTCAGCTCGTCAAGGCGACGAACGCCTACAGCGAATACACGCGCGGCCGCGCGCAGGAAATGGTCCGCGAATCGGC
CGACCACTACGCGAGCCAGCGCCTGTTGCTGGTCGGCCTGTGCGCGGCGGCGATCGGCGCGGCGGTGATCGCGGCGATCC
TGATCGCGCGGGGCTTGATGCGCGCGCTCGGCGCCGAACCCGCGACGCTCGGCGACGTCACGCGGCGCGTCGCGAACGGC
GATCTGAGCCCGGTCGCGGGCGCGCAGACGGCGCCGTCGGGCAGCGTGCTCGCATCGATGGGCGAGATGCAGGCGAGCCT
CGTGCGGCTGATCGGGCAGGTGAGCACCGCCGCGGACAGCATTGCGACGGGTTCGAGCCAGATCGCGTCGGGCAACCAGG
ATCTGTCGTCGCGCACCGAGCATCAGGCTTCGTCGCTGCAGGAAACGGCCTCCAGCATGGAGGAGTTGACGTCGACCGTG
CGCCAGAACGCGGAGAACGCGCAGCAGGCGAGCTCGCTCGCGGCGAACGCGTCGGAAGTCGCTCAAAAGGGCAGTACGGT
GGTCGGGCAGGTCGTCGACACGATGACCGACATCAGCCAGAGCTCGGAGAAAGTCGCGGAAATCACCGGGATCATCGAGA
GTATCGCGTTCCAGACCAACATCCTCGCGCTGAATGCGGCCGTCGAGGCGGCCCGCGCGGGCGAGCAGGGGCGCGGCTTC
GCGGTCGTCGCGAGCGAAGTGCGCAGCCTCGCGCAGCGCTCGTCGAGCGCGGCGAAGGAGATCAAGGATCTGATCAACGC
GTCGGTGCAGAAGATCCATGACGGCTCGGCGCTCGCGGGCGAGGCGGGCAAGACGATGACCGAAGTCACGCAGGCGGTCG
CGCGCGTGACCGACATCATGGGCGAGATCGCCGCGGCGTCCGGCGAGCAGAGCCGCGGCATCGAGCAGGTGAACCAGGCG
ATCGCGCAGATGGACGAAGTCACGCAGCAGAACGCCGCGCTCGTCGAGGAGGCGGCGGCCGCGTCGAAGTCGCTCGAAGA
GCAGGGGCGCCATCTGACGCAGGCCGTGTCGTTCTTCCGCGCGAGCGCCGCAAGCGCGGCGCCGCAAGCGCGGCACGCGG
CGCCGGCCAAGCCGAAGGCGAAGCGCGGCGTGGCGGCTCCCGCCTCCGCGCCGCGCGCGGCGCACGCCGCACCGACGTTC
AACAAACCGGCGCCGGCTCTCGCCGCCGCCGCGACCGCAAGCGACGACTGGCAGACCTTCTGA

Upstream 100 bases:

>100_bases
CGAATCGCCTCTCAAGCATTGCGCATGGCGGCCGTTACCACGTGGCAATGCGTCGCATAGTGCAACGCACATTCCGAGGT
CGGATGAATCGAGGTAATCC

Downstream 100 bases:

>100_bases
CGGCGGCGCGCAACCCCAACGCGAGGAGGACAACGCAATGAATGCAATTCTGGAAGCGCCGCACGCGGCGCGCATGAGCG
GGCAGGACGCGGCGCGCGAT

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 580; Mature: 580

Protein sequence:

>580_residues
MNFQNMTVSTKLTLAFGALVGLVLLVSVLALHALGDANDRFASYVSGISARAEAAEQVRTAVDRRAIAARNLVLVTKPAD
VELEKAAVTQAEDDVQAHLRRLKELLSSASDGNDKARGLVADIDRVEAQYGPVALAIVNAALNNRHDEAITMMNDQCRPL
LAQLVKATNAYSEYTRGRAQEMVRESADHYASQRLLLVGLCAAAIGAAVIAAILIARGLMRALGAEPATLGDVTRRVANG
DLSPVAGAQTAPSGSVLASMGEMQASLVRLIGQVSTAADSIATGSSQIASGNQDLSSRTEHQASSLQETASSMEELTSTV
RQNAENAQQASSLAANASEVAQKGSTVVGQVVDTMTDISQSSEKVAEITGIIESIAFQTNILALNAAVEAARAGEQGRGF
AVVASEVRSLAQRSSSAAKEIKDLINASVQKIHDGSALAGEAGKTMTEVTQAVARVTDIMGEIAAASGEQSRGIEQVNQA
IAQMDEVTQQNAALVEEAAAASKSLEEQGRHLTQAVSFFRASAASAAPQARHAAPAKPKAKRGVAAPASAPRAAHAAPTF
NKPAPALAAAATASDDWQTF

Sequences:

>Translated_580_residues
MNFQNMTVSTKLTLAFGALVGLVLLVSVLALHALGDANDRFASYVSGISARAEAAEQVRTAVDRRAIAARNLVLVTKPAD
VELEKAAVTQAEDDVQAHLRRLKELLSSASDGNDKARGLVADIDRVEAQYGPVALAIVNAALNNRHDEAITMMNDQCRPL
LAQLVKATNAYSEYTRGRAQEMVRESADHYASQRLLLVGLCAAAIGAAVIAAILIARGLMRALGAEPATLGDVTRRVANG
DLSPVAGAQTAPSGSVLASMGEMQASLVRLIGQVSTAADSIATGSSQIASGNQDLSSRTEHQASSLQETASSMEELTSTV
RQNAENAQQASSLAANASEVAQKGSTVVGQVVDTMTDISQSSEKVAEITGIIESIAFQTNILALNAAVEAARAGEQGRGF
AVVASEVRSLAQRSSSAAKEIKDLINASVQKIHDGSALAGEAGKTMTEVTQAVARVTDIMGEIAAASGEQSRGIEQVNQA
IAQMDEVTQQNAALVEEAAAASKSLEEQGRHLTQAVSFFRASAASAAPQARHAAPAKPKAKRGVAAPASAPRAAHAAPTF
NKPAPALAAAATASDDWQTF
>Mature_580_residues
MNFQNMTVSTKLTLAFGALVGLVLLVSVLALHALGDANDRFASYVSGISARAEAAEQVRTAVDRRAIAARNLVLVTKPAD
VELEKAAVTQAEDDVQAHLRRLKELLSSASDGNDKARGLVADIDRVEAQYGPVALAIVNAALNNRHDEAITMMNDQCRPL
LAQLVKATNAYSEYTRGRAQEMVRESADHYASQRLLLVGLCAAAIGAAVIAAILIARGLMRALGAEPATLGDVTRRVANG
DLSPVAGAQTAPSGSVLASMGEMQASLVRLIGQVSTAADSIATGSSQIASGNQDLSSRTEHQASSLQETASSMEELTSTV
RQNAENAQQASSLAANASEVAQKGSTVVGQVVDTMTDISQSSEKVAEITGIIESIAFQTNILALNAAVEAARAGEQGRGF
AVVASEVRSLAQRSSSAAKEIKDLINASVQKIHDGSALAGEAGKTMTEVTQAVARVTDIMGEIAAASGEQSRGIEQVNQA
IAQMDEVTQQNAALVEEAAAASKSLEEQGRHLTQAVSFFRASAASAAPQARHAAPAKPKAKRGVAAPASAPRAAHAAPTF
NKPAPALAAAATASDDWQTF

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=392, Percent_Identity=52.0408163265306, Blast_Score=317, Evalue=2e-87,
Organism=Escherichia coli, GI1787690, Length=420, Percent_Identity=47.8571428571429, Blast_Score=301, Evalue=1e-82,
Organism=Escherichia coli, GI1788195, Length=338, Percent_Identity=54.1420118343195, Blast_Score=296, Evalue=3e-81,
Organism=Escherichia coli, GI1788194, Length=415, Percent_Identity=44.3373493975904, Blast_Score=289, Evalue=3e-79,
Organism=Escherichia coli, GI1789453, Length=267, Percent_Identity=40.0749063670412, Blast_Score=196, Evalue=3e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR003122
- InterPro:   IPR004091
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 60042; Mature: 60042

Theoretical pI: Translated: 5.53; Mature: 5.53

Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFQNMTVSTKLTLAFGALVGLVLLVSVLALHALGDANDRFASYVSGISARAEAAEQVRT
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AVDRRAIAARNLVLVTKPADVELEKAAVTQAEDDVQAHLRRLKELLSSASDGNDKARGLV
HHHHHHHHHCCEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ADIDRVEAQYGPVALAIVNAALNNRHDEAITMMNDQCRPLLAQLVKATNAYSEYTRGRAQ
HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMVRESADHYASQRLLLVGLCAAAIGAAVIAAILIARGLMRALGAEPATLGDVTRRVANG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
DLSPVAGAQTAPSGSVLASMGEMQASLVRLIGQVSTAADSIATGSSQIASGNQDLSSRTE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHH
HQASSLQETASSMEELTSTVRQNAENAQQASSLAANASEVAQKGSTVVGQVVDTMTDISQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHH
SSEKVAEITGIIESIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSSAAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IKDLINASVQKIHDGSALAGEAGKTMTEVTQAVARVTDIMGEIAAASGEQSRGIEQVNQA
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHH
IAQMDEVTQQNAALVEEAAAASKSLEEQGRHLTQAVSFFRASAASAAPQARHAAPAKPKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHH
KRGVAAPASAPRAAHAAPTFNKPAPALAAAATASDDWQTF
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MNFQNMTVSTKLTLAFGALVGLVLLVSVLALHALGDANDRFASYVSGISARAEAAEQVRT
CCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
AVDRRAIAARNLVLVTKPADVELEKAAVTQAEDDVQAHLRRLKELLSSASDGNDKARGLV
HHHHHHHHHCCEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
ADIDRVEAQYGPVALAIVNAALNNRHDEAITMMNDQCRPLLAQLVKATNAYSEYTRGRAQ
HHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EMVRESADHYASQRLLLVGLCAAAIGAAVIAAILIARGLMRALGAEPATLGDVTRRVANG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCC
DLSPVAGAQTAPSGSVLASMGEMQASLVRLIGQVSTAADSIATGSSQIASGNQDLSSRTE
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCHHHHHHH
HQASSLQETASSMEELTSTVRQNAENAQQASSLAANASEVAQKGSTVVGQVVDTMTDISQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHH
SSEKVAEITGIIESIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRSLAQRSSSAAKE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHH
IKDLINASVQKIHDGSALAGEAGKTMTEVTQAVARVTDIMGEIAAASGEQSRGIEQVNQA
HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHH
IAQMDEVTQQNAALVEEAAAASKSLEEQGRHLTQAVSFFRASAASAAPQARHAAPAKPKA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCCCCHH
KRGVAAPASAPRAAHAAPTFNKPAPALAAAATASDDWQTF
HCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2496104 [H]