| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126452037
Identifier: 126452037
GI number: 126452037
Start: 1689848
End: 1691194
Strand: Direct
Name: 126452037
Synonym: BURPS1106A_1731
Alternate gene names: NA
Gene position: 1689848-1691194 (Clockwise)
Preceding gene: 126453195
Following gene: 126455137
Centisome position: 42.37
GC content: 69.12
Gene sequence:
>1347_bases GTGTGTCGTGTATCGGTTTGTGTTTTTCTTGAGCCGAGCGTAGGAAACGAAGACGGTCAAGTCAACGGCACGGCGGCGTG TTCGCGCGTGCCGCGCATGCGTGTCGTGGCGCTTCGCGCGGCGGCGGCGCGCCCGTGCGGCATATTGCGGCAGCGGCGCG CGCGAGCGCGGTGGCGGCGATTCGCCGAACGCGCGCATTGCTTCGATCCGATGCGCCTGCGACGTGAATCGATGCGCCCG GCGCACGATTGCCGAAACGGATTGCTTGCGCGTTTCGGCATCGGCATCGATCGCGCGGGCCGTCCGGCATCGCGCGATCG TCCGTTCGGCCGACCGGCCGCGCGTGACGAAGCGGTTTACAATCGGCTCATGTGTTCGGCGGCCCGTCGCCACCGGGGCG CCGAGCGTTCGACCACGCCGATCGTTCGTCAGGATGCGCCGATGTCATCGAATCCCGCCACTTCCGTCTCCCCGCGCGAG CGTCGCGTGCAATGCGCGAATCCGCTGGGGCTGCACCACATCGCCTATACCGAATGGGGCGATCCCGCGAACCCGCGCGT GCTCGTGTGCGTGCACGGCTTGACGCGTTCGGGGCGCGATTTCGATCGTCTCGCGGCGGCGCTGTCCGATGTCTATCGCG TCGTCTGCCCGGATGTGGCCGGCCGCGGCCGCTCCGACTGGCTCGCGGATCCGAAGCGCTATGCCGTGCCGCAGTACGTG TCCGACATCGTCACGCTGATCGCGCGCCTCGATGTCGAACGCGTCGACTGGTTCGGCACGTCGATGGGCGGCCTGATCGG TCTCGCGCTCGGCGGGCTGCCGGGCACGCCGATCGGCAGGATGCTCGTCAACGACATCGGGCCGCACATCGAGCCCGCCG CGCTCGAGCGCATCGGCGAATACGTCGGGCTCGACAAGCGCTTTGCGACCGAGCAGGAGGGCGTTGATTATCTGACGTCG CTGTCGCTGTCGTTCGGCCCGCTCACGCCGGACGAGTGGCGCGCGCTGAATCGGCCGTTGCTCGTGCGGGACGCGGACGG CTCGTGGCGCGCACGCTACGATCCGCGGATCGCCGAGCCTTTCAAGACGGCCACGCCGGAGGCGAATGCGCAGGGCGAGG CATGGCTCTGGCATGCGCTCGGGGCGTTCGCGGGGCCGCTGCTCGTCGTGCGCGGCGTGCAGTCGGACCTGCTGTCGCGC GAGACGCTCGAGGCGATGAAGGCGCGCGGACAAGCGGTGACGAGCGTCGAGATCGCCGAGGCCGGCCATGCGCCCGCGTT CGTGAGCGCCGAGCAGATCGCGATCGCGCGCCAATTTTTCGTCGGAGACGCGCCGCACGCGTCATAA
Upstream 100 bases:
>100_bases CGATCAGGATCTGCGCGGACATCGCGAGTCTTCCGCCGCCTCGCCGAACGGATCGCGGAGCGCGTCGGCAAGGCGGCCGG TTGAGTCGGATGGGAAATGC
Downstream 100 bases:
>100_bases TATGCGGTTCGGCGCCGCACGCTCGAACGCGTGCGGCGCCGTCCACCGATCAACCATTCAACCGGGAATTCTCATGGCAG TTACTCGTCATCACGTCGGT
Product: alpha/beta fold family hydrolase
Products: NA
Alternate protein names: Alpha/Beta Hydrolase Fold; Hydrolase; Hydrolase Alpha/Beta Fold Family; Alpha/Beta Hydrolase; Alpha/Beta Fold Family Hydrolase; Hydrolase Or Acyltransferase; Hydrolase Protein; 2-Hydroxy-6-Oxo-6-Phenylhexa-2 4-Dienoate Hydrolase; Alpha/Beta Hydrolase Fold Family Protein; Esterase/Lipase/Thioesterase Family Protein; Hydrolase/Acyltransferase; D-(-)-3-Hydroxybutyrate Oligomer Hydrolase; Cation Diffusion Facilitator Family Transporter; Hydrolases Or Acyltransferases; Hydroxybutyrate-Dimer Hydrolase Protein; Alpha/Beta Hydrolase Fold Family; Alpha/Beta Hydrolase Superfamily Protein; Hydrolase / Acyltransferase; Hydrolase Alpha/Beta Fold Family Protein; Alpha/Beta Hydrolase Fold-Containing Protein
Number of amino acids: Translated: 448; Mature: 448
Protein sequence:
>448_residues MCRVSVCVFLEPSVGNEDGQVNGTAACSRVPRMRVVALRAAAARPCGILRQRRARARWRRFAERAHCFDPMRLRRESMRP AHDCRNGLLARFGIGIDRAGRPASRDRPFGRPAARDEAVYNRLMCSAARRHRGAERSTTPIVRQDAPMSSNPATSVSPRE RRVQCANPLGLHHIAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDVYRVVCPDVAGRGRSDWLADPKRYAVPQYV SDIVTLIARLDVERVDWFGTSMGGLIGLALGGLPGTPIGRMLVNDIGPHIEPAALERIGEYVGLDKRFATEQEGVDYLTS LSLSFGPLTPDEWRALNRPLLVRDADGSWRARYDPRIAEPFKTATPEANAQGEAWLWHALGAFAGPLLVVRGVQSDLLSR ETLEAMKARGQAVTSVEIAEAGHAPAFVSAEQIAIARQFFVGDAPHAS
Sequences:
>Translated_448_residues MCRVSVCVFLEPSVGNEDGQVNGTAACSRVPRMRVVALRAAAARPCGILRQRRARARWRRFAERAHCFDPMRLRRESMRP AHDCRNGLLARFGIGIDRAGRPASRDRPFGRPAARDEAVYNRLMCSAARRHRGAERSTTPIVRQDAPMSSNPATSVSPRE RRVQCANPLGLHHIAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDVYRVVCPDVAGRGRSDWLADPKRYAVPQYV SDIVTLIARLDVERVDWFGTSMGGLIGLALGGLPGTPIGRMLVNDIGPHIEPAALERIGEYVGLDKRFATEQEGVDYLTS LSLSFGPLTPDEWRALNRPLLVRDADGSWRARYDPRIAEPFKTATPEANAQGEAWLWHALGAFAGPLLVVRGVQSDLLSR ETLEAMKARGQAVTSVEIAEAGHAPAFVSAEQIAIARQFFVGDAPHAS >Mature_448_residues MCRVSVCVFLEPSVGNEDGQVNGTAACSRVPRMRVVALRAAAARPCGILRQRRARARWRRFAERAHCFDPMRLRRESMRP AHDCRNGLLARFGIGIDRAGRPASRDRPFGRPAARDEAVYNRLMCSAARRHRGAERSTTPIVRQDAPMSSNPATSVSPRE RRVQCANPLGLHHIAYTEWGDPANPRVLVCVHGLTRSGRDFDRLAAALSDVYRVVCPDVAGRGRSDWLADPKRYAVPQYV SDIVTLIARLDVERVDWFGTSMGGLIGLALGGLPGTPIGRMLVNDIGPHIEPAALERIGEYVGLDKRFATEQEGVDYLTS LSLSFGPLTPDEWRALNRPLLVRDADGSWRARYDPRIAEPFKTATPEANAQGEAWLWHALGAFAGPLLVVRGVQSDLLSR ETLEAMKARGQAVTSVEIAEAGHAPAFVSAEQIAIARQFFVGDAPHAS
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49190; Mature: 49190
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCRVSVCVFLEPSVGNEDGQVNGTAACSRVPRMRVVALRAAAARPCGILRQRRARARWRR CCEEEEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FAERAHCFDPMRLRRESMRPAHDCRNGLLARFGIGIDRAGRPASRDRPFGRPAARDEAVY HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH NRLMCSAARRHRGAERSTTPIVRQDAPMSSNPATSVSPRERRVQCANPLGLHHIAYTEWG HHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCC DPANPRVLVCVHGLTRSGRDFDRLAAALSDVYRVVCPDVAGRGRSDWLADPKRYAVPQYV CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHH SDIVTLIARLDVERVDWFGTSMGGLIGLALGGLPGTPIGRMLVNDIGPHIEPAALERIGE HHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH YVGLDKRFATEQEGVDYLTSLSLSFGPLTPDEWRALNRPLLVRDADGSWRARYDPRIAEP HHCCCHHHCCHHHCHHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCEECCCCCCCCC FKTATPEANAQGEAWLWHALGAFAGPLLVVRGVQSDLLSRETLEAMKARGQAVTSVEIAE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH AGHAPAFVSAEQIAIARQFFVGDAPHAS CCCCCCCCCHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MCRVSVCVFLEPSVGNEDGQVNGTAACSRVPRMRVVALRAAAARPCGILRQRRARARWRR CCEEEEEEEECCCCCCCCCCCCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHH FAERAHCFDPMRLRRESMRPAHDCRNGLLARFGIGIDRAGRPASRDRPFGRPAARDEAVY HHHHHHCCCHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHH NRLMCSAARRHRGAERSTTPIVRQDAPMSSNPATSVSPRERRVQCANPLGLHHIAYTEWG HHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCC DPANPRVLVCVHGLTRSGRDFDRLAAALSDVYRVVCPDVAGRGRSDWLADPKRYAVPQYV CCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHCCHHHH SDIVTLIARLDVERVDWFGTSMGGLIGLALGGLPGTPIGRMLVNDIGPHIEPAALERIGE HHHHHHHHHHCHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHH YVGLDKRFATEQEGVDYLTSLSLSFGPLTPDEWRALNRPLLVRDADGSWRARYDPRIAEP HHCCCHHHCCHHHCHHHHHHHCCCCCCCCCHHHHHCCCCEEEEECCCCCEECCCCCCCCC FKTATPEANAQGEAWLWHALGAFAGPLLVVRGVQSDLLSRETLEAMKARGQAVTSVEIAE CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEHHH AGHAPAFVSAEQIAIARQFFVGDAPHAS CCCCCCCCCHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA