Definition Burkholderia pseudomallei 1106a chromosome I, complete genome.
Accession NC_009076
Length 3,988,455

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The map label for this gene is cht60 [H]

Identifier: 126452022

GI number: 126452022

Start: 1603687

End: 1605786

Strand: Direct

Name: cht60 [H]

Synonym: BURPS1106A_1651

Alternate gene names: 126452022

Gene position: 1603687-1605786 (Clockwise)

Preceding gene: 126452479

Following gene: 126451755

Centisome position: 40.21

GC content: 70.05

Gene sequence:

>2100_bases
ATGAAACGACGTGAATGCCGCGGGAATGCGCGCGGCAAGGATTCGGTGAAGATGCGCAAGAAAAGCTTGGTTCATTTGCC
CGTCGCGCTGGCGGTGGCCGCGGCGCTCGGCGCGTGCTCGGGCGACGACGACGCGACGCTCGAGTCGCGCGCGGACGCGA
TCGTCGAACGCATGACGACCCGGCAGAAGGTCGGCCAGAAACTGATGATGGCGTTCCGGTACTGGTGCCCCGACGGGCAG
CCCGCGTGCACGGCCGGCATGACCGAATTTCCCGACGCCGCGCGCGACGCGCTGCGCGAGAACGGCATTGGCGGCGTGAT
CCTGTTCTCGAACAACCTGACGGGCATCGAGCAGACGCGCCGGCTGATCGACGGCATTCGGGCCGCGCCCGCGGCCGACA
GCCCGCTCGGGCTGATGATCGGCATCGACGAGGAGGGCGGCAACGTGTTTCGCCTGCCGCGCGTCGAGGCGAGCGCGTTC
GCCGGCAACATGGCGCTCGGCGCGGCGTACGAAGCGACGCGGGACGACCGGCTCGCGTACGACATGGGCCGCGTGCTCGC
CGCGGAGATCGCGGCGGTCGGCTTCAACGTGAATTTCGCGCCGGACGTCGACGTCAACAGCAATCCGCTCAATCCGGTGA
TCAACGTGCGCGCGTTCGGCGACGATCCGGCGACGATCGGCCTGCTCGGCCGGCGCATGGTGCAGGGCATGAAGAGCGAG
CGCGTGATCGGCACGTTCAAGCATTTTCCCGGGCACGGCGACACGGATACCGATTCGCACTACGGATTGCCCGTCGTGAT
CAAGTCGCGCGCCGACGCCTACGCGATCGATCTCGCGCCGTACCGGCAGGCGATCGAAGCGGGCGAGGCGCCCGACATGA
TCATGACCGCGCACATCCAGTATCCGTCGCTCGACGACACCCGCGTCGCGACCCGCACGGGCGAGCAGATGATCGCGCCC
GCGACGATGTCGCGGCGCATCCAGCACGATATCCTGCGCGGCGAGTTCGGCTATCAGGGCGTGACGATCACCGACGCGCT
CGACATGAAGGGCATCGCCGGCTTCTTCGACGAGGACGACGCGGTCGTCAAGGTGTTCCAGGCGGACGTCGACATTGCGC
TGATGCCCGTCGAGTTTCGCACCGCGGCCGATGCCGGGCGCCTGGCGGCGCTCGTCGATCGCGTCGCCGCGGCGGTCGAT
TCGGGGCGGATCGATCGCGCCGAGTTCGATCGCTCGGTGCGCCGTATCGTGCTGACGAAGCTGCGCCACGGCATCGTCGC
GTCGGATCGCGGCCGGCCGGTCGACGAGCTGGCATCGATCGGCGGGCCCGCGCACCGCGCGATCGAGCGCGACATCGCGC
AAAAATCGATCACCGTGCTGCGCAACGAGAACGGCGCGCTGCCGCTGCAGGCCGCGGGCCGGCGCATCTTCATCCTGACG
CCGTGGGGCGAGCAGGCCGAGGCGATGCGGCGGCGTTTCGTCGAGCTTGGCCATCCGCTCGTCACGGGCGCGAAGCTGAG
CGCGATCACGTGGGCCGAACAGCAGCAGGCGATCGATGCGGCCGACGTCGTGATCGTCGGCACGCTGTCGACGGGCGTCA
CCCCCGTCGAGCACAACGGGGATCCGAACGCGCGCGTGAGCCCGCCGGCGCCGTCGGCCGTGCGGATGCGGCAGGCCGCG
CCCGCGAACGGCGAGGAGGAGGGTTCGGTGATCTTCGACCACGTCGAGCGGGCGGACGCGGCGAAGGACATCGGCGCGCG
CCCGAGCGTGCTCGCGGCGATCGCGGCGCCGAGCGAGGCGCAGCAGATGCGCGACGCGATGGACTACGCGAAGGCGCGGC
GCAAGACCGTGATCCACGTGACGATGCGCGCGCCGTACGACGTGATCAGCTACGACGATGTCGCGGACGCGACGCTCGCC
ACCTACGCGTACTACGGCTACGAAGGCGGCTTGCGCGGCCCGTCGCTGCCCGCGGCCGTCGACGCGATGCTCGGCGTCGC
GCGGCCGGTCGGCAGGCTGCCGGTCGCGATCCACGCGCTGAACGCGGACGGATCGACGGGGCCGCTGCGCTACGCGCGCG
GATTCGGGTTGCAGTACTGA

Upstream 100 bases:

>100_bases
CATTTGACGAATTCGATGAATGGGCATTCTGAGTGAATGAATACGCGTGAAGTTCCGGAGTACCGATGAACCGAAAGCCG
ATAGGGATGCCGGATGACGA

Downstream 100 bases:

>100_bases
GGCCGGACGCCGGCGACGCCGCGTCGCTGTCGGCGCGGCGTCGAGCGACACGCCGCGCGCGCAGGCGGGCTGCGGCGGCG
CGGCCGATCGCCGCGCGTTA

Product: glycosy hydrolase family protein

Products: NA

Alternate protein names: Beta-N-acetylhexosaminidase; Chitobiase; N-acetyl-beta-glucosaminidase [H]

Number of amino acids: Translated: 699; Mature: 699

Protein sequence:

>699_residues
MKRRECRGNARGKDSVKMRKKSLVHLPVALAVAAALGACSGDDDATLESRADAIVERMTTRQKVGQKLMMAFRYWCPDGQ
PACTAGMTEFPDAARDALRENGIGGVILFSNNLTGIEQTRRLIDGIRAAPAADSPLGLMIGIDEEGGNVFRLPRVEASAF
AGNMALGAAYEATRDDRLAYDMGRVLAAEIAAVGFNVNFAPDVDVNSNPLNPVINVRAFGDDPATIGLLGRRMVQGMKSE
RVIGTFKHFPGHGDTDTDSHYGLPVVIKSRADAYAIDLAPYRQAIEAGEAPDMIMTAHIQYPSLDDTRVATRTGEQMIAP
ATMSRRIQHDILRGEFGYQGVTITDALDMKGIAGFFDEDDAVVKVFQADVDIALMPVEFRTAADAGRLAALVDRVAAAVD
SGRIDRAEFDRSVRRIVLTKLRHGIVASDRGRPVDELASIGGPAHRAIERDIAQKSITVLRNENGALPLQAAGRRIFILT
PWGEQAEAMRRRFVELGHPLVTGAKLSAITWAEQQQAIDAADVVIVGTLSTGVTPVEHNGDPNARVSPPAPSAVRMRQAA
PANGEEEGSVIFDHVERADAAKDIGARPSVLAAIAAPSEAQQMRDAMDYAKARRKTVIHVTMRAPYDVISYDDVADATLA
TYAYYGYEGGLRGPSLPAAVDAMLGVARPVGRLPVAIHALNADGSTGPLRYARGFGLQY

Sequences:

>Translated_699_residues
MKRRECRGNARGKDSVKMRKKSLVHLPVALAVAAALGACSGDDDATLESRADAIVERMTTRQKVGQKLMMAFRYWCPDGQ
PACTAGMTEFPDAARDALRENGIGGVILFSNNLTGIEQTRRLIDGIRAAPAADSPLGLMIGIDEEGGNVFRLPRVEASAF
AGNMALGAAYEATRDDRLAYDMGRVLAAEIAAVGFNVNFAPDVDVNSNPLNPVINVRAFGDDPATIGLLGRRMVQGMKSE
RVIGTFKHFPGHGDTDTDSHYGLPVVIKSRADAYAIDLAPYRQAIEAGEAPDMIMTAHIQYPSLDDTRVATRTGEQMIAP
ATMSRRIQHDILRGEFGYQGVTITDALDMKGIAGFFDEDDAVVKVFQADVDIALMPVEFRTAADAGRLAALVDRVAAAVD
SGRIDRAEFDRSVRRIVLTKLRHGIVASDRGRPVDELASIGGPAHRAIERDIAQKSITVLRNENGALPLQAAGRRIFILT
PWGEQAEAMRRRFVELGHPLVTGAKLSAITWAEQQQAIDAADVVIVGTLSTGVTPVEHNGDPNARVSPPAPSAVRMRQAA
PANGEEEGSVIFDHVERADAAKDIGARPSVLAAIAAPSEAQQMRDAMDYAKARRKTVIHVTMRAPYDVISYDDVADATLA
TYAYYGYEGGLRGPSLPAAVDAMLGVARPVGRLPVAIHALNADGSTGPLRYARGFGLQY
>Mature_699_residues
MKRRECRGNARGKDSVKMRKKSLVHLPVALAVAAALGACSGDDDATLESRADAIVERMTTRQKVGQKLMMAFRYWCPDGQ
PACTAGMTEFPDAARDALRENGIGGVILFSNNLTGIEQTRRLIDGIRAAPAADSPLGLMIGIDEEGGNVFRLPRVEASAF
AGNMALGAAYEATRDDRLAYDMGRVLAAEIAAVGFNVNFAPDVDVNSNPLNPVINVRAFGDDPATIGLLGRRMVQGMKSE
RVIGTFKHFPGHGDTDTDSHYGLPVVIKSRADAYAIDLAPYRQAIEAGEAPDMIMTAHIQYPSLDDTRVATRTGEQMIAP
ATMSRRIQHDILRGEFGYQGVTITDALDMKGIAGFFDEDDAVVKVFQADVDIALMPVEFRTAADAGRLAALVDRVAAAVD
SGRIDRAEFDRSVRRIVLTKLRHGIVASDRGRPVDELASIGGPAHRAIERDIAQKSITVLRNENGALPLQAAGRRIFILT
PWGEQAEAMRRRFVELGHPLVTGAKLSAITWAEQQQAIDAADVVIVGTLSTGVTPVEHNGDPNARVSPPAPSAVRMRQAA
PANGEEEGSVIFDHVERADAAKDIGARPSVLAAIAAPSEAQQMRDAMDYAKARRKTVIHVTMRAPYDVISYDDVADATLA
TYAYYGYEGGLRGPSLPAAVDAMLGVARPVGRLPVAIHALNADGSTGPLRYARGFGLQY

Specific function: Most active towards p-nitrophenyl-N-acetyl-beta-D- glucosaminide(PNP-beta-GlcNAc) and diacetylchitobiose [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1787350, Length=266, Percent_Identity=31.203007518797, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1788453, Length=686, Percent_Identity=23.7609329446064, Blast_Score=93, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019800
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3 [H]

EC number: =3.2.1.52 [H]

Molecular weight: Translated: 75026; Mature: 75026

Theoretical pI: Translated: 6.34; Mature: 6.34

Prosite motif: PS00775 GLYCOSYL_HYDROL_F3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRRECRGNARGKDSVKMRKKSLVHLPVALAVAAALGACSGDDDATLESRADAIVERMTT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RQKVGQKLMMAFRYWCPDGQPACTAGMTEFPDAARDALRENGIGGVILFSNNLTGIEQTR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHH
RLIDGIRAAPAADSPLGLMIGIDEEGGNVFRLPRVEASAFAGNMALGAAYEATRDDRLAY
HHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCHHHHCCCCCCCCHHHCCCCCHHHH
DMGRVLAAEIAAVGFNVNFAPDVDVNSNPLNPVINVRAFGDDPATIGLLGRRMVQGMKSE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC
RVIGTFKHFPGHGDTDTDSHYGLPVVIKSRADAYAIDLAPYRQAIEAGEAPDMIMTAHIQ
CEEEHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECHHHHHHHHCCCCCCEEEEEEEE
YPSLDDTRVATRTGEQMIAPATMSRRIQHDILRGEFGYQGVTITDALDMKGIAGFFDEDD
CCCCCCCHHHHHCCCHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
AVVKVFQADVDIALMPVEFRTAADAGRLAALVDRVAAAVDSGRIDRAEFDRSVRRIVLTK
CEEEEEECCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LRHGIVASDRGRPVDELASIGGPAHRAIERDIAQKSITVLRNENGALPLQAAGRRIFILT
HHHCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCEEEEEC
PWGEQAEAMRRRFVELGHPLVTGAKLSAITWAEQQQAIDAADVVIVGTLSTGVTPVEHNG
CCCHHHHHHHHHHHHHCCCEECCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCEECCCC
DPNARVSPPAPSAVRMRQAAPANGEEEGSVIFDHVERADAAKDIGARPSVLAAIAAPSEA
CCCCEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHH
QQMRDAMDYAKARRKTVIHVTMRAPYDVISYDDVADATLATYAYYGYEGGLRGPSLPAAV
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCHHHH
DAMLGVARPVGRLPVAIHALNADGSTGPLRYARGFGLQY
HHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCC
>Mature Secondary Structure
MKRRECRGNARGKDSVKMRKKSLVHLPVALAVAAALGACSGDDDATLESRADAIVERMTT
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
RQKVGQKLMMAFRYWCPDGQPACTAGMTEFPDAARDALRENGIGGVILFSNNLTGIEQTR
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHH
RLIDGIRAAPAADSPLGLMIGIDEEGGNVFRLPRVEASAFAGNMALGAAYEATRDDRLAY
HHHHHHHCCCCCCCCCEEEEEEECCCCCEEEECCCCHHHHCCCCCCCCHHHCCCCCHHHH
DMGRVLAAEIAAVGFNVNFAPDVDVNSNPLNPVINVRAFGDDPATIGLLGRRMVQGMKSE
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCCC
RVIGTFKHFPGHGDTDTDSHYGLPVVIKSRADAYAIDLAPYRQAIEAGEAPDMIMTAHIQ
CEEEHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEECHHHHHHHHCCCCCCEEEEEEEE
YPSLDDTRVATRTGEQMIAPATMSRRIQHDILRGEFGYQGVTITDALDMKGIAGFFDEDD
CCCCCCCHHHHHCCCHHCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCCC
AVVKVFQADVDIALMPVEFRTAADAGRLAALVDRVAAAVDSGRIDRAEFDRSVRRIVLTK
CEEEEEECCCCEEEEEEEHHCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LRHGIVASDRGRPVDELASIGGPAHRAIERDIAQKSITVLRNENGALPLQAAGRRIFILT
HHHCCEECCCCCCHHHHHHCCCHHHHHHHHHHHHHHEEEEECCCCCCCHHHCCCEEEEEC
PWGEQAEAMRRRFVELGHPLVTGAKLSAITWAEQQQAIDAADVVIVGTLSTGVTPVEHNG
CCCHHHHHHHHHHHHHCCCEECCCEEEEEEHHHHHHCCCCCCEEEEEECCCCCCEECCCC
DPNARVSPPAPSAVRMRQAAPANGEEEGSVIFDHVERADAAKDIGARPSVLAAIAAPSEA
CCCCEECCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCCHHH
QQMRDAMDYAKARRKTVIHVTMRAPYDVISYDDVADATLATYAYYGYEGGLRGPSLPAAV
HHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCHHHHHHHHHEEECCCCCCCCCCCHHHH
DAMLGVARPVGRLPVAIHALNADGSTGPLRYARGFGLQY
HHHHHHHCCCCCCCEEEEEECCCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8063094 [H]