| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
Click here to switch to the map view.
The map label for this gene is mmlH [H]
Identifier: 126451973
GI number: 126451973
Start: 1579840
End: 1581177
Strand: Reverse
Name: mmlH [H]
Synonym: BURPS1106A_1625
Alternate gene names: 126451973
Gene position: 1581177-1579840 (Counterclockwise)
Preceding gene: 126452497
Following gene: 126453165
Centisome position: 39.64
GC content: 67.04
Gene sequence:
>1338_bases ATGCGGGCTTTTTCTCGATCGCTGATTGAGACATCATTCTGGAGAGCGCGAGTGAACTGGTACAAAGAAATATCGCCCGT GGAAAGACGCACGTTCAAAGGATGTTTTTCCGGCTGGGCGCTCGACGGCGTCGATACGCAGATGTTCAGCCTCGTGATTC CGGCGCTGCTCACGGCATGGGGCATCGGCAAGGGACAGGCGGGCCTGATCGGCGGCGCGACGCTCGCCGCGGGTGCGATC GGCGGCCTGCTCGCCGGCATGATCGCCGATCGCTTCGGCCGCGTGCGTGCGCTGCAGATCACCGTGTGCTGGTTCTCGCT GTTCACGTTCCTCAGCGCGTTCGCGCAGAACTTCGAGCAATTGCTGGTGCTGAAGACGCTGCAAGGGCTCGGCTTCGGCG GCGAATGGACGGCGGGCGCCGTGCTGTTGAGCGAGACGATTCGCGCGCGGCACCGCGGCAAGGCGATGGGCATCGTGCAG AGCGCATGGGGCTTCGGCTGGGGCGGCGCGGTGCTCCTCTACACGCTCGTCTTCTCGTGGCTGCCGCCCGAATGGGCGTG GCGCGTGCTGTTCGCGATCGGCGTGCTGCCCGCGCTGCTCGTGCTGTACATCCGGCGCGCGATTCCCGAGCCGCCGCGCG ACGACGCACGCGTGGCCGTTTCCACATCGGCCGCGGCTGCGCAGACCGCGCCGGCACGCGCGTCGGCGAAGAGCATCTTC GATCCGTCGGTGCTCCGGATGACGATCGTCGGCGGCCTGATCGGCGTCGGCGCGCACGGCGGCTATCATGCGATCACGAC CTGGCTGCCGACCTACCTGAAGACCGAACGTCATCTCTCGGTGCTCGGCACGGGCGCGTATCTCGCCGTGATCATCGTCG CGTTCATCATCGGCTGCATGACGAGCGCCTACCTGCAGGACCGCATCGGCCGCCGCAGGAATCTGATGCTGTTCTCCGCG TGCTGCGTCGTGACGGTCAACCTGTACGTGATGCTGCCGCTCGACAACGTCGCGATGCTGCTGCTCGGCTTTCCGCTCGG CTTCTTCGCGGCCGGCATCCCGGCCACGCTCGGCGCGCTCTTCAATGAGCTCTATCCGAGAAACGTGCGTGGCCGGGGCG TCGGCTTTTGCTACAACTTCGGACGCGTGGCGTCGGCGATCTTCCCGGTGCTGGTCGGACACATGGGCACGTCGATGCCG CTCGGCGTCGCGCTCGGCATCGACGCGGGCATCGCGTACGGGCTCGTGTTCGTCGCCGTGTGGTTCCTGCCCGAGACGCG CGCGCGCGATATCCAGCCGTCGCAACCCGAGGCCCGGATCCGCGAGGCCGCGCTCTAG
Upstream 100 bases:
>100_bases CAGTCCGACACGAGGTCCGCCATCATAATTTTCTTTTATCGATAATGCTCGCTTTCGTGATGCATATGTCGTTTACCACT CGATAAAATATGACGATATG
Downstream 100 bases:
>100_bases ACGCCGAGCGGCGCAACGGGCTTCCGTCATTTCGTGGGTTTTTCATGGATCAGGCATCGAACGATCCGGCAGTCGAAACG ACAGGCCGCCCCTTCGCCAC
Product: major facilitator family transporter
Products: Proton [Cytoplasm]; N-acetylneuraminate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 445; Mature: 445
Protein sequence:
>445_residues MRAFSRSLIETSFWRARVNWYKEISPVERRTFKGCFSGWALDGVDTQMFSLVIPALLTAWGIGKGQAGLIGGATLAAGAI GGLLAGMIADRFGRVRALQITVCWFSLFTFLSAFAQNFEQLLVLKTLQGLGFGGEWTAGAVLLSETIRARHRGKAMGIVQ SAWGFGWGGAVLLYTLVFSWLPPEWAWRVLFAIGVLPALLVLYIRRAIPEPPRDDARVAVSTSAAAAQTAPARASAKSIF DPSVLRMTIVGGLIGVGAHGGYHAITTWLPTYLKTERHLSVLGTGAYLAVIIVAFIIGCMTSAYLQDRIGRRRNLMLFSA CCVVTVNLYVMLPLDNVAMLLLGFPLGFFAAGIPATLGALFNELYPRNVRGRGVGFCYNFGRVASAIFPVLVGHMGTSMP LGVALGIDAGIAYGLVFVAVWFLPETRARDIQPSQPEARIREAAL
Sequences:
>Translated_445_residues MRAFSRSLIETSFWRARVNWYKEISPVERRTFKGCFSGWALDGVDTQMFSLVIPALLTAWGIGKGQAGLIGGATLAAGAI GGLLAGMIADRFGRVRALQITVCWFSLFTFLSAFAQNFEQLLVLKTLQGLGFGGEWTAGAVLLSETIRARHRGKAMGIVQ SAWGFGWGGAVLLYTLVFSWLPPEWAWRVLFAIGVLPALLVLYIRRAIPEPPRDDARVAVSTSAAAAQTAPARASAKSIF DPSVLRMTIVGGLIGVGAHGGYHAITTWLPTYLKTERHLSVLGTGAYLAVIIVAFIIGCMTSAYLQDRIGRRRNLMLFSA CCVVTVNLYVMLPLDNVAMLLLGFPLGFFAAGIPATLGALFNELYPRNVRGRGVGFCYNFGRVASAIFPVLVGHMGTSMP LGVALGIDAGIAYGLVFVAVWFLPETRARDIQPSQPEARIREAAL >Mature_445_residues MRAFSRSLIETSFWRARVNWYKEISPVERRTFKGCFSGWALDGVDTQMFSLVIPALLTAWGIGKGQAGLIGGATLAAGAI GGLLAGMIADRFGRVRALQITVCWFSLFTFLSAFAQNFEQLLVLKTLQGLGFGGEWTAGAVLLSETIRARHRGKAMGIVQ SAWGFGWGGAVLLYTLVFSWLPPEWAWRVLFAIGVLPALLVLYIRRAIPEPPRDDARVAVSTSAAAAQTAPARASAKSIF DPSVLRMTIVGGLIGVGAHGGYHAITTWLPTYLKTERHLSVLGTGAYLAVIIVAFIIGCMTSAYLQDRIGRRRNLMLFSA CCVVTVNLYVMLPLDNVAMLLLGFPLGFFAAGIPATLGALFNELYPRNVRGRGVGFCYNFGRVASAIFPVLVGHMGTSMP LGVALGIDAGIAYGLVFVAVWFLPETRARDIQPSQPEARIREAAL
Specific function: Probable uptake of 4-methylmuconolactone [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family [H]
Homologues:
Organism=Homo sapiens, GI24308167, Length=448, Percent_Identity=24.5535714285714, Blast_Score=96, Evalue=5e-20, Organism=Homo sapiens, GI213021148, Length=443, Percent_Identity=21.6704288939052, Blast_Score=77, Evalue=4e-14, Organism=Homo sapiens, GI4507005, Length=229, Percent_Identity=26.6375545851528, Blast_Score=67, Evalue=3e-11, Organism=Escherichia coli, GI87082231, Length=485, Percent_Identity=25.1546391752577, Blast_Score=122, Evalue=6e-29, Organism=Escherichia coli, GI87082404, Length=393, Percent_Identity=24.9363867684478, Blast_Score=117, Evalue=2e-27, Organism=Escherichia coli, GI1786229, Length=431, Percent_Identity=24.5939675174014, Blast_Score=96, Evalue=3e-21, Organism=Escherichia coli, GI1790550, Length=401, Percent_Identity=27.431421446384, Blast_Score=93, Evalue=3e-20, Organism=Escherichia coli, GI87081723, Length=403, Percent_Identity=28.287841191067, Blast_Score=88, Evalue=1e-18, Organism=Escherichia coli, GI87082159, Length=360, Percent_Identity=25.8333333333333, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1789152, Length=345, Percent_Identity=24.0579710144928, Blast_Score=76, Evalue=4e-15, Organism=Escherichia coli, GI1788942, Length=327, Percent_Identity=26.9113149847095, Blast_Score=76, Evalue=5e-15, Organism=Escherichia coli, GI1789515, Length=347, Percent_Identity=22.1902017291066, Blast_Score=68, Evalue=1e-12, Organism=Caenorhabditis elegans, GI32564663, Length=438, Percent_Identity=22.6027397260274, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI19922616, Length=419, Percent_Identity=25.7756563245823, Blast_Score=86, Evalue=5e-17, Organism=Drosophila melanogaster, GI19922874, Length=383, Percent_Identity=21.4099216710183, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR005829 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 48039; Mature: 48039
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: PS50850 MFS ; PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAFSRSLIETSFWRARVNWYKEISPVERRTFKGCFSGWALDGVDTQMFSLVIPALLTAW CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GIGKGQAGLIGGATLAAGAIGGLLAGMIADRFGRVRALQITVCWFSLFTFLSAFAQNFEQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHH LLVLKTLQGLGFGGEWTAGAVLLSETIRARHRGKAMGIVQSAWGFGWGGAVLLYTLVFSW HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHC LPPEWAWRVLFAIGVLPALLVLYIRRAIPEPPRDDARVAVSTSAAAAQTAPARASAKSIF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHCC DPSVLRMTIVGGLIGVGAHGGYHAITTWLPTYLKTERHLSVLGTGAYLAVIIVAFIIGCM CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TSAYLQDRIGRRRNLMLFSACCVVTVNLYVMLPLDNVAMLLLGFPLGFFAAGIPATLGAL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH FNELYPRNVRGRGVGFCYNFGRVASAIFPVLVGHMGTSMPLGVALGIDAGIAYGLVFVAV HHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHH WFLPETRARDIQPSQPEARIREAAL HHCCCCCCCCCCCCCCHHHHHHCCC >Mature Secondary Structure MRAFSRSLIETSFWRARVNWYKEISPVERRTFKGCFSGWALDGVDTQMFSLVIPALLTAW CCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHH GIGKGQAGLIGGATLAAGAIGGLLAGMIADRFGRVRALQITVCWFSLFTFLSAFAQNFEQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHHHHHHHHHH LLVLKTLQGLGFGGEWTAGAVLLSETIRARHRGKAMGIVQSAWGFGWGGAVLLYTLVFSW HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHC LPPEWAWRVLFAIGVLPALLVLYIRRAIPEPPRDDARVAVSTSAAAAQTAPARASAKSIF CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHCCCCHHHHHHCC DPSVLRMTIVGGLIGVGAHGGYHAITTWLPTYLKTERHLSVLGTGAYLAVIIVAFIIGCM CHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH TSAYLQDRIGRRRNLMLFSACCVVTVNLYVMLPLDNVAMLLLGFPLGFFAAGIPATLGAL HHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHHHHH FNELYPRNVRGRGVGFCYNFGRVASAIFPVLVGHMGTSMPLGVALGIDAGIAYGLVFVAV HHHHCCCCCCCCCCEEEECHHHHHHHHHHHHHHHCCCCCCCCEEECCHHHHHHHHHHHHH WFLPETRARDIQPSQPEARIREAAL HHCCCCCCCCCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; N-acetylneuraminate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + N-acetylneuraminate [Periplasm] = Proton [Cytoplasm] + N-acetylneuraminate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9461415 [H]