| Definition | Burkholderia pseudomallei 1106a chromosome I, complete genome. |
|---|---|
| Accession | NC_009076 |
| Length | 3,988,455 |
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The map label for this gene is 126451873
Identifier: 126451873
GI number: 126451873
Start: 836051
End: 836416
Strand: Direct
Name: 126451873
Synonym: BURPS1106A_0855
Alternate gene names: NA
Gene position: 836051-836416 (Clockwise)
Preceding gene: 126453104
Following gene: 126454764
Centisome position: 20.96
GC content: 64.75
Gene sequence:
>366_bases ATGTCCGACGCCGCAGGCCATCGCATCGAAATCGAGCCGAACCGCCATCGGGTTCGCGTGATCCATCGCGGCATCACCTA TGCCGATTCGCTTGCCGCCTATACGCTGCGGGAACCGGGCGCGCCCGATGTCCAGTATCTGCCGCGCGACGACGTCAACA TGTCGCGGCTCGTGCCGTCCGATCGCGTCGCGCTCGAGCATTGCGCGCACAAGGGGCCGGCCACTTACTTTCATCTGCAT ACCGAAGACGGCGTGATCGAGAACGCCGCATGGAGTTACGAGGAGCCGTCCGGGATCGCGAACGCGATCCGGCAGTACGT CGCGTTCGATGCCGCGTGCGTCGACCGCATCGACGTGACGTCCTGA
Upstream 100 bases:
>100_bases TTTGCGGCGGTTTGGCCGATAATGCGATAACAAGCGGCGTTTCGCCGCGGCCATGCCTATTTCCGGCCGGCGTTTCGCGC GGCGGCCGCAGGGGAACCCG
Downstream 100 bases:
>100_bases CGCGGCGGTTCATCGGGGGAGGCGATCATGGAACTGAACGACGCGCTGTACATTCCGCTCGCACCGTCCGTCGTCTGGGA CGCGCTGCAGGATCTCGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MSDAAGHRIEIEPNRHRVRVIHRGITYADSLAAYTLREPGAPDVQYLPRDDVNMSRLVPSDRVALEHCAHKGPATYFHLH TEDGVIENAAWSYEEPSGIANAIRQYVAFDAACVDRIDVTS
Sequences:
>Translated_121_residues MSDAAGHRIEIEPNRHRVRVIHRGITYADSLAAYTLREPGAPDVQYLPRDDVNMSRLVPSDRVALEHCAHKGPATYFHLH TEDGVIENAAWSYEEPSGIANAIRQYVAFDAACVDRIDVTS >Mature_120_residues SDAAGHRIEIEPNRHRVRVIHRGITYADSLAAYTLREPGAPDVQYLPRDDVNMSRLVPSDRVALEHCAHKGPATYFHLHT EDGVIENAAWSYEEPSGIANAIRQYVAFDAACVDRIDVTS
Specific function: Unknown
COG id: COG2343
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13499; Mature: 13368
Theoretical pI: Translated: 5.84; Mature: 5.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDAAGHRIEIEPNRHRVRVIHRGITYADSLAAYTLREPGAPDVQYLPRDDVNMSRLVPS CCCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHEECCCCCCCCEECCCCCCCHHHCCCC DRVALEHCAHKGPATYFHLHTEDGVIENAAWSYEEPSGIANAIRQYVAFDAACVDRIDVT HHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCEECCC S C >Mature Secondary Structure SDAAGHRIEIEPNRHRVRVIHRGITYADSLAAYTLREPGAPDVQYLPRDDVNMSRLVPS CCCCCCEEEECCCCCEEEEEECCCCCHHHHHHHEECCCCCCCCEECCCCCCCHHHCCCC DRVALEHCAHKGPATYFHLHTEDGVIENAAWSYEEPSGIANAIRQYVAFDAACVDRIDVT HHHHHHHHCCCCCCEEEEEECCCCEECCCCCCCCCCHHHHHHHHHHHHHHHHHHCEECCC S C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA